From: Kemal Gurer <address@hidden>
Subject: A bug report
To: address@hidden
Date: Thu, 25 Sep 2003 13:31:40 -0700
X-Sent: 11 hours, 28 minutes, 20 seconds ago

Hello,

I am trying to compile "R" on an DS20E DEC-ALPHA machine.
Output of "configure" file asks me to send its report to you.
Since "configure" did not gracefully finish, "make" cannot be
run. I am sure experts in creating and examining the outputs of
configure file will look at this error report first and figure out
what is going on. Please find that error report as an attachment
to this e-mail.

If you have any questions, please let me know. With regards,

Kemal.

---------------------------------------
Kemal Gurer, Ph.D.
Staff Air Pollution Specialist
California Air Resources Board
Planning and Technical Support Division
1001 I Street
Sacramento, CA 95814

(916) 323 4406 (W)
(916) 327 8524 (Fax)

checking for a BSD-compatible install... /usr/local/bin/install -c
checking whether build environment is sane... yes
checking whether make sets $(MAKE)... yes
checking for working aclocal-1.4... missing
checking for working autoconf... found
checking for working automake-1.4... missing
checking for working autoheader... found
checking for working makeinfo... found
checking build system type... alphaev67-dec-osf5.1
checking host system type... alphaev67-dec-osf5.1
loading site script './config.site'
loading build specific script './config.site'
checking for pwd... /bin/pwd
checking whether builddir is srcdir... yes
checking for gawk... gawk
checking for egrep... grep -E
checking whether ln -s works... yes
checking for ranlib... ranlib
checking for bison... bison -y
checking for ar... ar
checking for javac... /bin/javac
checking for less... /usr/local/bin/less
checking for perl... /bin/perl
checking whether perl version is at least 5.004... yes
checking for dvips... no
checking for tex... no
checking for latex... no
configure: WARNING: you cannot build DVI versions of the R manuals
checking for makeindex... no
checking for pdftex... no
checking for pdflatex... no
configure: WARNING: you cannot build PDF versions of the R manuals
checking for makeinfo... /usr/local/bin/makeinfo
checking for unzip... /usr/local/bin/unzip
checking for zip... /usr/local/bin/zip
checking for gcc... gcc
checking for C compiler default output... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ANSI C... none needed
checking for ld used by GCC... /bin/ld
checking if the linker (/bin/ld) is GNU ld... no
checking for /bin/ld option to reload object files... -r
checking for BSD-compatible nm... /bin/nm -B
checking for a sed that does not truncate output... /bin/sed
checking how to recognise dependent libraries... pass_all
checking command to parse /bin/nm -B output... failed
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... no
checking for sys/stat.h... no
checking for stdlib.h... no
checking for string.h... no
checking for memory.h... no
checking for strings.h... no
checking for inttypes.h... no
checking for stdint.h... no
checking for unistd.h... no
checking dlfcn.h usability... no
checking dlfcn.h presence... yes
configure: WARNING: dlfcn.h: present but cannot be compiled
configure: WARNING: dlfcn.h: check for missing prerequisite headers?
configure: WARNING: dlfcn.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for dlfcn.h... yes
checking for ranlib... (cached) ranlib
checking for strip... strip
checking for objdir... .libs
checking for gcc option to produce PIC... none
checking if gcc static flag -static works... yes
checking if gcc supports -c -o file.o... no
checking if we can lock with hard links... yes
checking if gcc supports -fno-rtti -fno-exceptions... yes
checking whether the linker (/bin/ld) supports shared libraries... yes
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... no
checking dynamic linker characteristics... osf5.1 ld.so
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking whether -lc should be explicitly linked in... cat: cannot open conftest.err

creating libtool
checking whether makeinfo version is at least 4... no
configure: WARNING: you cannot build info versions of the R manuals
checking for netscape... /usr/bin/X11/netscape
using default browser ... /usr/bin/X11/netscape
checking for acroread... /usr/local/bin/acroread
checking for gcc... (cached) gcc
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc accepts -g... (cached) yes
checking for gcc option to accept ANSI C... (cached) none needed
checking whether gcc needs -traditional... no
checking how to run the C preprocessor... gcc -E
checking for g77... no
checking for f77... f77
checking whether we are using the GNU Fortran 77 compiler... no
checking whether f77 accepts -g... yes
checking for g++... g++
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking how to run the C++ preprocessor... g++ -E
checking for main in -lm... yes
checking for sin in -lm... yes
checking for main in -lncurses... yes
checking for dlopen in -ldl... no
checking for rl_callback_read_char in -lreadline... no
checking for ANSI C header files... (cached) yes
checking whether time.h and sys/time.h may both be included... yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking for sys/wait.h that is POSIX.1 compatible... yes
checking arpa/inet.h usability... no
checking arpa/inet.h presence... yes
configure: WARNING: arpa/inet.h: present but cannot be compiled
configure: WARNING: arpa/inet.h: check for missing prerequisite headers?
configure: WARNING: arpa/inet.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for arpa/inet.h... yes
checking dl.h usability... no
checking dl.h presence... no
checking for dl.h... no
checking for dlfcn.h... (cached) yes
checking elf.h usability... no
checking elf.h presence... no
checking for elf.h... no
checking fcntl.h usability... no
checking fcntl.h presence... yes
configure: WARNING: fcntl.h: present but cannot be compiled
configure: WARNING: fcntl.h: check for missing prerequisite headers?
configure: WARNING: fcntl.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for fcntl.h... yes
checking floatingpoint.h usability... no
checking floatingpoint.h presence... no
checking for floatingpoint.h... no
checking fpu_control.h usability... no
checking fpu_control.h presence... no
checking for fpu_control.h... no
checking grp.h usability... no
checking grp.h presence... yes
configure: WARNING: grp.h: present but cannot be compiled
configure: WARNING: grp.h: check for missing prerequisite headers?
configure: WARNING: grp.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for grp.h... yes
checking ieee754.h usability... no
checking ieee754.h presence... no
checking for ieee754.h... no
checking ieeefp.h usability... no
checking ieeefp.h presence... no
checking for ieeefp.h... no
checking locale.h usability... no
checking locale.h presence... yes
configure: WARNING: locale.h: present but cannot be compiled
configure: WARNING: locale.h: check for missing prerequisite headers?
configure: WARNING: locale.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for locale.h... yes
checking netdb.h usability... no
checking netdb.h presence... yes
configure: WARNING: netdb.h: present but cannot be compiled
configure: WARNING: netdb.h: check for missing prerequisite headers?
configure: WARNING: netdb.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for netdb.h... yes
checking netinet/in.h usability... no
checking netinet/in.h presence... yes
configure: WARNING: netinet/in.h: present but cannot be compiled
configure: WARNING: netinet/in.h: check for missing prerequisite headers?
configure: WARNING: netinet/in.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for netinet/in.h... yes
checking pwd.h usability... no
checking pwd.h presence... yes
configure: WARNING: pwd.h: present but cannot be compiled
configure: WARNING: pwd.h: check for missing prerequisite headers?
configure: WARNING: pwd.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for pwd.h... yes
checking readline/history.h usability... no
checking readline/history.h presence... yes
configure: WARNING: readline/history.h: present but cannot be compiled
configure: WARNING: readline/history.h: check for missing prerequisite headers?
configure: WARNING: readline/history.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for readline/history.h... yes
checking readline/readline.h usability... no
checking readline/readline.h presence... yes
configure: WARNING: readline/readline.h: present but cannot be compiled
configure: WARNING: readline/readline.h: check for missing prerequisite headers?
configure: WARNING: readline/readline.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for readline/readline.h... yes
checking for strings.h... (cached) no
checking sys/param.h usability... no
checking sys/param.h presence... yes
configure: WARNING: sys/param.h: present but cannot be compiled
configure: WARNING: sys/param.h: check for missing prerequisite headers?
configure: WARNING: sys/param.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for sys/param.h... yes
checking sys/select.h usability... no
checking sys/select.h presence... yes
configure: WARNING: sys/select.h: present but cannot be compiled
configure: WARNING: sys/select.h: check for missing prerequisite headers?
configure: WARNING: sys/select.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for sys/select.h... yes
checking sys/socket.h usability... no
checking sys/socket.h presence... yes
configure: WARNING: sys/socket.h: present but cannot be compiled
configure: WARNING: sys/socket.h: check for missing prerequisite headers?
configure: WARNING: sys/socket.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for sys/socket.h... yes
checking for sys/stat.h... (cached) no
checking sys/time.h usability... no
checking sys/time.h presence... yes
configure: WARNING: sys/time.h: present but cannot be compiled
configure: WARNING: sys/time.h: check for missing prerequisite headers?
configure: WARNING: sys/time.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for sys/time.h... yes
checking sys/times.h usability... no
checking sys/times.h presence... yes
configure: WARNING: sys/times.h: present but cannot be compiled
configure: WARNING: sys/times.h: check for missing prerequisite headers?
configure: WARNING: sys/times.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for sys/times.h... yes
checking sys/utsname.h usability... no
checking sys/utsname.h presence... yes
configure: WARNING: sys/utsname.h: present but cannot be compiled
configure: WARNING: sys/utsname.h: check for missing prerequisite headers?
configure: WARNING: sys/utsname.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for sys/utsname.h... yes
checking for unistd.h... (cached) no
checking errno.h usability... no
checking errno.h presence... yes
configure: WARNING: errno.h: present but cannot be compiled
configure: WARNING: errno.h: check for missing prerequisite headers?
configure: WARNING: errno.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for errno.h... yes
checking stdarg.h usability... no
checking stdarg.h presence... yes
configure: WARNING: stdarg.h: present but cannot be compiled
configure: WARNING: stdarg.h: check for missing prerequisite headers?
configure: WARNING: stdarg.h: proceeding with the preprocessor's result
configure: WARNING:     ## ------------------------------------ ##
configure: WARNING:     ## Report this to address@hidden ##
configure: WARNING:     ## ------------------------------------ ##
checking for stdarg.h... yes
checking for string.h... (cached) no
checking whether setjmp.h is POSIX.1 compatible... yes
checking for GNU C library with version >= 2... no
checking return type of signal handlers... void
checking for pid_t... yes
checking for size_t... yes
checking for blkcnt_t... no
checking for type of socket length... size_t *
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for int... yes
checking size of int... configure: error: cannot compute sizeof (int), 77
See `config.log' for more details.
[3. Card for Kemal Gurer --- text/x-vcard; kgurer.vcf]...