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bug#59772: conda 22.9.0 breaks "conda init bash"


From: Hugo Buddelmeijer
Subject: bug#59772: conda 22.9.0 breaks "conda init bash"
Date: Fri, 2 Dec 2022 12:48:53 +0100

Hi all,

Conda 22.9.0 breaks "conda init bash". Conda requires some functions to be present in ~/.bashrc (or equivalent dot file for other shells) in order to function as intended [*]. These functions are added there through "conda init bash", which each conda user should run once.

$ guix shell -C conda sudo

[env]$ conda --version
conda 22.9.0

[env]$ conda init bash
[..]
      File "/gnu/store/lvip6h5pamjwmvnkwg60sjb63ph8698k-python-3.9.9/lib/python3.9/subprocess.py", line 19
59, in _communicate
        input_view = memoryview(self._input)
    TypeError: memoryview: a bytes-like object is required, not 'str'
[...]

However, it seems that this is a conda problem (not sure), and not a guix problem. E.g. see
   https://github.com/conda/conda/issues/11885
   "conda 22.9.0 breaks bash command prompt"
The suggested solution there is to do "sudo $(which conda) init bash", which is not really acceptable for us.

Also, "conda init bash" does seem to actually do what it is supposed to do: add conda functions to ~/.bashrc; the error occurs after that. So maybe we can just wait this out, or try to see whether it works with conda 22.11.0.

Greetings,
Hugo

[*] There are also some problems in the interplay between guix and the conda functions in .bashrc. I'll report those later.


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