Re: [O] New markup for revising manuscripts

[John Kitchin]

probably no lisp required. See the post I referenced. It is all done in
the org-file there.

Doyley, Marvin M. writes:

> Hi John,
>
> I like the idea of special block that definitely solve the multi-line 
> problem. But I would need to write an latex exporter for the block, how 
> challenging would that be ? I am still learning lisp :)
>
> Cheers,
> M
>> On Mar 11, 2017, at 1:22 PM, John Kitchin <address@hidden> wrote:
>>
>> This is probably not feasible with links. that is also a challenge with
>> Eric's markup approach. One way is to use visual wrapping so whole
>> paragraphs are actually one line. Another is to use some kind of custom 
>> block.
>> It has been a while since I tried this: 
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__kitchingroup.cheme.cmu.edu_blog_2013_11_30_Custom-2Ddirectives_&d=DwIBAg&c=kbmfwr1Yojg42sGEpaQh5ofMHBeTl9EI2eaqQZhHbOU&r=s3_3riAscdqtNAzgOuwYB9g0dZVGcp8BNCy_RylYdxU&m=HR848Kl27487mBHnj6hZWqJ4zVzwnz8yn_CYsmstLLc&s=CgaellrR4m7Y4Quba00w0ekyLA_np6lkrXxoWv4awZQ&e=
>>
>> Multiline mostly works with criticmarks using multiline fontlock. The
>> nice thing about this is that it is still plain text markup, but relies
>> on font-lock which can be slow, and or unreliable in my experience.
>>
>> This was one reason I started looking at the overlay approach in
>> ov-highlighter. It nicely manages multiline comments, but is not part of
>> org markup though. A downside is you have to store the overlays in the
>> document to get persistence, and it is easily breakable if others edit
>> the document without using the package.
>>
>> Doyley, Marvin M. writes:
>>
>>> Thanks John,
>>>
>>> Works like a charm. Any idea how to write comments that spans multiple 
>>> lines ?
>>>
>>> cheers,
>>> M
>>>> On Mar 11, 2017, at 7:55 AM, John Kitchin <address@hidden> wrote:
>>>>
>>>> it looks like you forgot to include format in the (eq ..) sexp.
>>>>
>>>> (org-link-set-parameters
>>>> "response"
>>>> :export (lambda (keyword desc format)
>>>>          (cond
>>>>           ((eq 'latex format)
>>>>            (format "\\textcolor{red}{%s}" keyword))))
>>>> :face '(:foreground "red"))
>>>> Doyley, Marvin M. writes:
>>>>
>>>>> Hi John,
>>>>>
>>>>> I make a colored link [[response: comments]], that makes the text 
>>>>> following the response keyword red. The only snag is that when I export 
>>>>> to latex I get [[response:comment]] rather than \textcolor{red}{comment}. 
>>>>> Any thoughts on what I am doing wrong ?
>>>>>
>>>>> Cheers,
>>>>> M
>>>>>
>>>>> PS.  Enclose is the code that I wrote based on your blog
>>>>>
>>>>>
>>>>> (org-link-set-parameters
>>>>> "response"
>>>>> :export (lambda (keyword desc format)
>>>>>          (cond
>>>>>           ((eq 'latex)
>>>>>            (format "\\textcolor{red}{%s}" keyword))))
>>>>> :face '(:foreground "red"))
>>>>>
>>>>>
>>>>>> On Mar 10, 2017, at 4:47 PM, John Kitchin <address@hidden> wrote:
>>>>>>
>>>>>> You can .... wait for it... make a colored link ;): 
>>>>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__kitchingroup.cheme.cmu.edu_blog_2016_11_04_New-2Dlink-2Dfeatures-2Din-2Dorg-2D9_-23org1bc1061&d=DwIBAg&c=kbmfwr1Yojg42sGEpaQh5ofMHBeTl9EI2eaqQZhHbOU&r=s3_3riAscdqtNAzgOuwYB9g0dZVGcp8BNCy_RylYdxU&m=K82CvGdcCIiUxLK-NulYuwGBzRdPZnZ9zByz2od0v9s&s=SVZmNbDCL0B9rvGIDHrFia_f1-mL_I_EmCUR_vcWkxg&e=
>>>>>>   
>>>>>> <https://urldefense.proofpoint.com/v2/url?u=http-3A__kitchingroup.cheme.cmu.edu_blog_2016_11_04_New-2Dlink-2Dfeatures-2Din-2Dorg-2D9_-23org1bc1061&d=DwMFaQ&c=kbmfwr1Yojg42sGEpaQh5ofMHBeTl9EI2eaqQZhHbOU&r=s3_3riAscdqtNAzgOuwYB9g0dZVGcp8BNCy_RylYdxU&m=9mMx6WEAeP-9u7CL3pjKmlORa7XXy-8WSBSwibTQWuo&s=4DUIBEXq8WNk6qHHyXFoIwWG4FlD2NlDgz8AfT2VUS0&e=>
>>>>>>
>>>>>> The example there has an html export defined, but you could as easily 
>>>>>> define a latex exporter. It has some limitations, like it might not 
>>>>>> reliably work on multiple lines, and you would not want to "highlight" 
>>>>>> across elements (or the latex will get ugly and probably not work).
>>>>>>
>>>>>> I have been working on some ways to get persistent highlighting using 
>>>>>> overlays for a similar purpose: 
>>>>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__kitchingroup.cheme.cmu.edu_blog_2016_11_10_Persistent-2Dhighlighting-2Din-2DEmacs_&d=DwIBAg&c=kbmfwr1Yojg42sGEpaQh5ofMHBeTl9EI2eaqQZhHbOU&r=s3_3riAscdqtNAzgOuwYB9g0dZVGcp8BNCy_RylYdxU&m=K82CvGdcCIiUxLK-NulYuwGBzRdPZnZ9zByz2od0v9s&s=11D132bMNfLVhS6-xXWo1p7tZ8EBpeZMgUvYmtcCD9I&e=
>>>>>>   
>>>>>> <https://urldefense.proofpoint.com/v2/url?u=http-3A__kitchingroup.cheme.cmu.edu_blog_2016_11_10_Persistent-2Dhighlighting-2Din-2DEmacs_&d=DwMFaQ&c=kbmfwr1Yojg42sGEpaQh5ofMHBeTl9EI2eaqQZhHbOU&r=s3_3riAscdqtNAzgOuwYB9g0dZVGcp8BNCy_RylYdxU&m=9mMx6WEAeP-9u7CL3pjKmlORa7XXy-8WSBSwibTQWuo&s=I0JDZ741rHEtzWzAF3lhW65rzNn4vdq4tiUyD10_7l0&e=>
>>>>>>
>>>>>> so far I only can get reliable output to html. Latex seems possible, 
>>>>>> again if you don't highlight across too many elements. It is a work in 
>>>>>> progress here: 
>>>>>> https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_jkitchin_scimax_blob_master_ov-2Dhighlighter.el&d=DwIBAg&c=kbmfwr1Yojg42sGEpaQh5ofMHBeTl9EI2eaqQZhHbOU&r=s3_3riAscdqtNAzgOuwYB9g0dZVGcp8BNCy_RylYdxU&m=K82CvGdcCIiUxLK-NulYuwGBzRdPZnZ9zByz2od0v9s&s=Cz0LeGE0ds46QIsBHJLgKVddn1pKWKlxsO1WpKqk8g4&e=
>>>>>>   
>>>>>> <https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_jkitchin_scimax_blob_master_ov-2Dhighlighter.el&d=DwMFaQ&c=kbmfwr1Yojg42sGEpaQh5ofMHBeTl9EI2eaqQZhHbOU&r=s3_3riAscdqtNAzgOuwYB9g0dZVGcp8BNCy_RylYdxU&m=9mMx6WEAeP-9u7CL3pjKmlORa7XXy-8WSBSwibTQWuo&s=2LS5YZIgyAvGS3fmo8rEgaDS2Tbu3UL10uqdUgH-LXc&e=>
>>>>>>
>>>>>> Towards the bottom of 
>>>>>> https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_jkitchin_scimax_blob_master_cm-2Dmods.el&d=DwIBAg&c=kbmfwr1Yojg42sGEpaQh5ofMHBeTl9EI2eaqQZhHbOU&r=s3_3riAscdqtNAzgOuwYB9g0dZVGcp8BNCy_RylYdxU&m=K82CvGdcCIiUxLK-NulYuwGBzRdPZnZ9zByz2od0v9s&s=gIkKQ99iatYU867xq50LnefeG4ehMUlgunqp1tD_H08&e=
>>>>>>   
>>>>>> <https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_jkitchin_scimax_blob_master_cm-2Dmods.el&d=DwMFaQ&c=kbmfwr1Yojg42sGEpaQh5ofMHBeTl9EI2eaqQZhHbOU&r=s3_3riAscdqtNAzgOuwYB9g0dZVGcp8BNCy_RylYdxU&m=9mMx6WEAeP-9u7CL3pjKmlORa7XXy-8WSBSwibTQWuo&s=hg-nJ1pgNjsD6TM3dFMEX7IADrW9iwU8e3nvulj1lFc&e=>
>>>>>>  I was working on some ways to use the criticmarkup  in conjunction with 
>>>>>> git diffs to automatically make these kinds of diffs.
>>>>>>
>>>>>> I can't say I am fully satisified by any of these solutions (that is why 
>>>>>> there are so many of them ;)
>>>>>>
>>>>>> John
>>>>>>
>>>>>> -----------------------------------
>>>>>> Professor John Kitchin
>>>>>> Doherty Hall A207F
>>>>>> Department of Chemical Engineering
>>>>>> Carnegie Mellon University
>>>>>> Pittsburgh, PA 15213
>>>>>> 412-268-7803
>>>>>> @johnkitchin
>>>>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__kitchingroup.cheme.cmu.edu&d=DwIBAg&c=kbmfwr1Yojg42sGEpaQh5ofMHBeTl9EI2eaqQZhHbOU&r=s3_3riAscdqtNAzgOuwYB9g0dZVGcp8BNCy_RylYdxU&m=K82CvGdcCIiUxLK-NulYuwGBzRdPZnZ9zByz2od0v9s&s=DASaHx5l-WylD2cRXx2j78TSLgKgWa6fpWAJhDW0Pj4&e=
>>>>>>   
>>>>>> <https://urldefense.proofpoint.com/v2/url?u=http-3A__kitchingroup.cheme.cmu.edu&d=DwMFaQ&c=kbmfwr1Yojg42sGEpaQh5ofMHBeTl9EI2eaqQZhHbOU&r=s3_3riAscdqtNAzgOuwYB9g0dZVGcp8BNCy_RylYdxU&m=9mMx6WEAeP-9u7CL3pjKmlORa7XXy-8WSBSwibTQWuo&s=9l9_vjFtxnWTTnFYN-Uy0mhhk-B5fKQeudqix5QWjqA&e=>
>>>>>>
>>>>>>
>>>>>> On Fri, Mar 10, 2017 at 3:56 PM, Kaushal Modi <address@hidden 
>>>>>> <mailto:address@hidden>> wrote:
>>>>>> I use this macro to highlight text in html/latex(pdf):
>>>>>>
>>>>>> #+MACRO: COLOR @@html:<span style="color: 
>>>>>> $1">$2</span>@@@@latex:\textcolor{$1}{$2}@@
>>>>>>
>>>>>> This is from 
>>>>>> https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_fniessen_org-2Dmacros_blob_master_README.org&d=DwIBAg&c=kbmfwr1Yojg42sGEpaQh5ofMHBeTl9EI2eaqQZhHbOU&r=s3_3riAscdqtNAzgOuwYB9g0dZVGcp8BNCy_RylYdxU&m=K82CvGdcCIiUxLK-NulYuwGBzRdPZnZ9zByz2od0v9s&s=nbREPuAqFdouIJ4LBeqzYA7oUI7vapuVV8ybX5__iHc&e=
>>>>>>   
>>>>>> <https://urldefense.proofpoint.com/v2/url?u=https-3A__github.com_fniessen_org-2Dmacros_blob_master_README.org&d=DwMFaQ&c=kbmfwr1Yojg42sGEpaQh5ofMHBeTl9EI2eaqQZhHbOU&r=s3_3riAscdqtNAzgOuwYB9g0dZVGcp8BNCy_RylYdxU&m=9mMx6WEAeP-9u7CL3pjKmlORa7XXy-8WSBSwibTQWuo&s=XDOhI8-iVimfEcDs18oR3i-Yyuic8xnEQRrHQ7lRlqI&e=>
>>>>>>
>>>>>> Example use:
>>>>>> {{{COLOR(red, This information is important.)}}}
>>>>>>
>>>>>> It doesn't though highlight the text in red in org-mode.
>>>>>>
>>>>>> On Fri, Mar 10, 2017 at 3:49 PM Doyley, Marvin M. <address@hidden 
>>>>>> <mailto:address@hidden>> wrote:
>>>>>> Hi there,
>>>>>>
>>>>>> When revising manuscripts, I usually highlight the changes (response to 
>>>>>> reviewer) in red. I use typically do this as follows:
>>>>>> (1) #+latex_header: \newcommand{\response}[1]{\textcolor{red}{#1}}
>>>>>> (2) \response{changes)
>>>>>>
>>>>>> Is there a more elegant way to do this ?  It would be nice if I could 
>>>>>> change the color of the select text in both org and the exported latex 
>>>>>> file to red. Seeing the highlighted text in org would be a huge plus.
>>>>>>
>>>>>> Thanks
>>>>>> M
>>>>>> --
>>>>>> Kaushal Modi
>>>>>>
>>>>>>
>>>>
>>>>
>>>> --
>>>> Professor John Kitchin
>>>> Doherty Hall A207F
>>>> Department of Chemical Engineering
>>>> Carnegie Mellon University
>>>> Pittsburgh, PA 15213
>>>> 412-268-7803
>>>> @johnkitchin
>>>> https://urldefense.proofpoint.com/v2/url?u=http-3A__kitchingroup.cheme.cmu.edu&d=DwIBAg&c=kbmfwr1Yojg42sGEpaQh5ofMHBeTl9EI2eaqQZhHbOU&r=s3_3riAscdqtNAzgOuwYB9g0dZVGcp8BNCy_RylYdxU&m=K82CvGdcCIiUxLK-NulYuwGBzRdPZnZ9zByz2od0v9s&s=DASaHx5l-WylD2cRXx2j78TSLgKgWa6fpWAJhDW0Pj4&e=
>>
>>
>> --
>> Professor John Kitchin
>> Doherty Hall A207F
>> Department of Chemical Engineering
>> Carnegie Mellon University
>> Pittsburgh, PA 15213
>> 412-268-7803
>> @johnkitchin
>> https://urldefense.proofpoint.com/v2/url?u=http-3A__kitchingroup.cheme.cmu.edu&d=DwIBAg&c=kbmfwr1Yojg42sGEpaQh5ofMHBeTl9EI2eaqQZhHbOU&r=s3_3riAscdqtNAzgOuwYB9g0dZVGcp8BNCy_RylYdxU&m=HR848Kl27487mBHnj6hZWqJ4zVzwnz8yn_CYsmstLLc&s=tzkgz4BW5dLySosHfzr7-xRCDyIG4RuaQbMrhZswNuw&e=


--
Professor John Kitchin
Doherty Hall A207F
Department of Chemical Engineering
Carnegie Mellon University
Pittsburgh, PA 15213
412-268-7803
@johnkitchin
http://kitchingroup.cheme.cmu.edu