Re: Help debugging R source code block output problem with :session

[John Hendy]

On Wed, Jan 12, 2022 at 1:50 AM Jeremie Juste <jeremiejuste@gmail.com> wrote:
>
> Hello John,
>
> Many thanks for reporting.  I'm short of time right now, but I'll take a 
> closer look at the problem over
> the weekend and keep you posted. Could you let me know which version of
> org-mode you are currently using?

Sure thing and thanks for the quick note! I use org from git and
*thought* it used to report the most recent release tag, but I see:

$ git log
commit 7fa8173282f85c2ca03cc7f51f28f6adfb250610 (HEAD -> master,
origin/master, origin/HEAD)
Author: Ian Martins <ianxm@jhu.edu>
Date:   Sat Jan 16 15:52:21 2021 -0500

But Mx-version:
Org mode version 9.4.4 (release_9.4.4-186-g7fa817.dirty @
/home/jwhendy/.elisp/org/lisp/)

So perhaps it appends the git commit to the system version?

Btw, it's dirty as I was able to apply Jack's patches (with some mods)
successfully and am a happy camper. In case it's helpful, I attached
the patches as I applied them (first -1, then -2) to this org-version.
Nothing special, they are just Jack's patches with a couple sections
removed (one change was already present, and I removed the adjustments
to the testing file as they were failing).

Thanks so much to all of you who contributed to that, as I'm so happy
that I can at least continue on with my report at this point with good
looking output!

Many thanks,
John

>
> Best regards,
> Jeremie Juste
>
>
> On Tuesday, 11 Jan 2022 at 17:36, John Hendy wrote:
> > Greetings,
> >
> > Apologies for writing off-list, but I don't have the original thread
> > anymore to reply to. I just pulled this group in directly from the
> > email I found... I just got bitten by this as well and burned most of
> > my afternoon trying to figure out what the issue was.
> >
> > Any further thoughts on a patch that could be finalized/applied?
> >
> > Is the one from the thread still the best from your continued experience?
> > https://list.orgmode.org/87zgxc42qg.fsf@gmail.com/
> >
> > This r/orgmode post was what finally got me to the existence of this
> > as a previous issue (I'd just sent my own email to list as my
> > searching did not find the above):
> > https://www.reddit.com/r/orgmode/comments/pt3em4/source_block_modifying_format_of_results_r/
> >
> > And it links to a patch as well:
> > https://gist.github.com/gtuckerkellogg/e356d20497cfdc8e4fc683412e320e3e
> >
> > Many thanks,
> > John

ob-R-1.patch
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ob-R-2.patch
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