espressomd-maintainer
[Top][All Lists]
Advanced

[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

[Espressomd-maintainer] Build failed in Jenkins: master-multiconfig-comp


From: Jenkins Demon
Subject: [Espressomd-maintainer] Build failed in Jenkins: master-multiconfig-compile » tunableslip #43
Date: Mon, 2 May 2016 16:24:44 +0200 (CEST)

See 
<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=tunableslip/43/changes>

Changes:

[Florian Weik] random: Reimplementet state gathering.

[Florian Weik] random: Reimplementet state gathering.

[Florian Weik] random:...

[Florian Weik] random: State can now be checkpointed again.

[Florian Weik] maintainer: NEWS

[Florian Weik] travis: Added boost mpi.

[Florian Weik] random: Fix const issue.

[Florian Weik] testsuite: Made langevin_per_particle test deterministic. This 
time for

------------------------------------------
[...truncated 516 lines...]
  CXX      angle_cossquare.lo
  CXX      angledist.lo
  CXX      dihedral.lo
  CXX      endangledist.lo
  CXX      fene.lo
  CXX      harmonic_dumbbell.lo
  CXX      harmonic.lo
  CXX      quartic.lo
  CXX      overlap.lo
  CXX      umbrella.lo
  CXX      bonded_coulomb.lo
  CXX      subt_lj.lo
  CXX      object-in-fluid/oif_global_forces.lo
  CXX      object-in-fluid/oif_local_forces.lo
  CXX      object-in-fluid/out_direction.lo
  CXX      hydrogen_bond.lo
  CXX      twist_stack.lo
  CXX      debye_hueckel.lo
  CXX      elc.lo
  CXX      magnetic_non_p3m_methods.lo
  CXX      mdlc_correction.lo
  CXX      maggs.lo
  CXX      mmm1d.lo
  CXX      mmm2d.lo
  CXX      mmm-common.lo
  CXX      p3m.lo
  CXX      p3m-common.lo
  CXX      p3m-dipolar.lo
  CXX      reaction_field.lo
  GEN      config-version.cpp
  NVCC     cuda_init_cuda.lo
  NVCC     cuda_common_cuda.lo
  NVCC     electrokinetics_cuda.lo
  NVCC     fd-electrostatics_cuda.lo
  NVCC     lbgpu_cuda.lo
  NVCC     p3m_gpu_cuda.lo
  NVCC     EspressoSystemInterface_cuda.lo
  NVCC     integrate_sd_cuda.lo
  NVCC     integrate_sd_cuda_kernel.lo
  NVCC     integrate_sd_cuda_debug.lo
  NVCC     integrate_sd_matrix.lo
  NVCC     integrate_sd_cuda_device.lo
  NVCC     actor/Mmm1dgpuForce_cuda.lo
  NVCC     actor/EwaldGPU_cuda.lo
  NVCC     actor/HarmonicWell_cuda.lo
  NVCC     immersed_boundary/ibm_cuda.lo
  NVCC     actor/DipolarDirectSum_cuda.lo
  NVCC     actor/HarmonicOrientationWell_cuda.lo
  NVCC     p3m_gpu_error_cuda.lo
  CXX      utils/statistics/RunningAverage.lo
  CXX      object-in-fluid/affinity.lo
  CXX      object-in-fluid/membrane_collision.lo
  CXX      immersed_boundary/ibm_main.lo
  CXX      immersed_boundary/ibm_triel.lo
  CXX      immersed_boundary/ibm_volume_conservation.lo
  CXX      immersed_boundary/ibm_tribend.lo
  CXX      immersed_boundary/ibm_cuda_interface.lo
  CXX      actor/ActorList.lo
  CXX      actor/HarmonicWell.lo
  CXX      actor/HarmonicOrientationWell.lo
  CXX      actor/Mmm1dgpuForce.lo
  CXX      actor/EwaldGPU.lo
  CXX      actor/DipolarDirectSum.lo
  CXX      config-version.lo
  CXXLD    libEspresso.la
make[5]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=tunableslip/ws/src/core'>
make[4]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=tunableslip/ws/src/core'>
make[3]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=tunableslip/ws/src/core'>
Making all in tcl
make[3]: Entering directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=tunableslip/ws/src/tcl'>
  CXX      bin_tcl.lo
  CXX      binary_file_tcl.lo
  CXX      blockfile_tcl.lo
  CXX      h5mdfile_tcl.lo
  CXX      rotate_system_tcl.lo
  CXX      readpdb_tcl.lo
  CXX      cells_tcl.lo
  CXX      channels_tcl.lo
  CXX      collision_tcl.lo
  CXX      comfixed_tcl.lo
  CXX      comforce_tcl.lo
  CXX      config_tcl.lo
  CXX      constraint_tcl.lo
  CXX      domain_decomposition_tcl.lo
  CXX      electrokinetics_tcl.lo
  CXX      external_potential_tcl.lo
  CXX      energy_tcl.lo
  CXX      galilei_tcl.lo
  CXX      global_tcl.lo
  CXX      grid_tcl.lo
  CXX      iccp3m_tcl.lo
  CXX      imd_tcl.lo
  CXX      initialize_interpreter.lo
  CXX      integrate_tcl.lo
  CXX      interaction_data_tcl.lo
  CXX      lb-boundaries_tcl.lo
  CXX      lb_tcl.lo
  CXX      lees_edwards_tcl.lo
  CXX      metadynamics_tcl.lo
  CXX      nemd_tcl.lo
  CXX      mol_cut_tcl.lo
  CXX      parser.lo
  CXX      particle_data_tcl.lo
  CXX      polymer_tcl.lo
  CXX      pressure_tcl.lo
  CXX      random_tcl.lo
  CXX      reaction_tcl.lo
  CXX      rattle_tcl.lo
  CXX      statistics_chain_tcl.lo
  CXX      statistics_cluster_tcl.lo
  CXX      statistics_correlation_tcl.lo
  CXX      statistics_fluid_tcl.lo
  CXX      statistics_observable_tcl.lo
  CXX      statistics_wallstuff_tcl.lo
  CXX      statistics_tcl.lo
  CXX      thermostat_tcl.lo
  CXX      topology_tcl.lo
  CXX      tuning_tcl.lo
  CXX      uwerr_tcl.lo
  CXX      virtual_sites_com_tcl.lo
  CXX      ghmc_tcl.lo
  CXX      twist_stack_tcl.lo
  CXX      hydrogen_bond_tcl.lo
  CXX      minimize_energy_tcl.lo
  CXX      integrate_sd_tcl.lo
  CXX      mpiio_tcl.lo
  CXX      bmhtf-nacl_tcl.lo
  CXX      buckingham_tcl.lo
  CXX      cos2_tcl.lo
  CXX      dpd_tcl.lo
  CXX      forcecap_tcl.lo
  CXX      gaussian_tcl.lo
  CXX      gb_tcl.lo
  CXX      hat_tcl.lo
  CXX      hertzian_tcl.lo
  CXX      lj_tcl.lo
  CXX      ljangle_tcl.lo
  CXX      ljcos2_tcl.lo
  CXX      ljcos_tcl.lo
  CXX      ljgen_tcl.lo
  CXX      morse_tcl.lo
  CXX      soft_sphere_tcl.lo
  CXX      steppot_tcl.lo
  CXX      tab_tcl.lo
  CXX      tunable_slip_tcl.lo
  CXX      angle_tcl.lo
  CXX      angle_harmonic_tcl.lo
  CXX      angle_cosine_tcl.lo
  CXX      angle_cossquare_tcl.lo
  CXX      angledist_tcl.lo
  CXX      dihedral_tcl.lo
  CXX      endangledist_tcl.lo
  CXX      fene_tcl.lo
  CXX      harmonic_dumbbell_tcl.lo
  CXX      harmonic_tcl.lo
  CXX      quartic_tcl.lo
  CXX      bonded_coulomb_tcl.lo
  CXX      overlap_tcl.lo
  CXX      subt_lj_tcl.lo
  CXX      umbrella_tcl.lo
  CXX      object-in-fluid/oif_global_forces_tcl.lo
  CXX      object-in-fluid/oif_local_forces_tcl.lo
  CXX      object-in-fluid/out_direction_tcl.lo
  CXX      debye_hueckel_tcl.lo
  CXX      elc_tcl.lo
  CXX      magnetic_non_p3m_methods_tcl.lo
  CXX      maggs_tcl.lo
  CXX      mmm1d_tcl.lo
  CXX      mmm2d_tcl.lo
  CXX      p3m-dipolar_tcl.lo
  CXX      p3m_tcl.lo
  CXX      reaction_field_tcl.lo
  CXX      mdlc_correction_tcl.lo
  CXX      cuda_init_tcl.lo
  CXX      Espresso_install-scriptsdir.o
  CXX      Espresso_install-main.o
  NVCC     cuda_workaround.o
  CXX      Espresso-scriptsdir.o
  CXX      Espresso-main.o
  CXX      object-in-fluid/affinity_tcl.lo
  CXX      object-in-fluid/membrane_collision_tcl.lo
  CXX      immersed_boundary/ibm_triel_tcl.lo
  CXX      immersed_boundary/ibm_volume_conservation_tcl.lo
  CXX      immersed_boundary/ibm_tribend_tcl.lo
  CXX      actor/Mmm1dgpu_tcl.lo
  CXX      actor/Ewaldgpu_tcl.lo
  CXX      actor/DipolarDirectSum_tcl.lo
  CXX      actor/HarmonicWell_tcl.lo
  CXX      actor/HarmonicOrientationWell_tcl.lo
  CXXLD    libEspressoTcl.la
  CXXLD    Espresso.install
  CXXLD    Espresso
../core/.libs/libEspresso.so: undefined reference to 
`boost::mpi::communicator::communicator(ompi_communicator_t* const&, 
boost::mpi::comm_create_kind)'
../core/.libs/libEspresso.so: undefined reference to 
`boost::archive::detail::basic_iarchive::basic_iarchive(unsigned int)'
../core/.libs/libEspresso.so: undefined reference to 
`boost::mpi::communicator::operator ompi_communicator_t*() const'
../core/.libs/libEspresso.so: undefined reference to 
`boost::archive::detail::shared_ptr_helper::shared_ptr_helper()'
../core/.libs/libEspresso.so: undefined reference to 
`boost::archive::detail.::.shared_ptr_helper/::core~/shared_ptr_helper.(libs/)libEspresso.so'
:. .undefined/ corereference/ .tolibs /`libEspresso.soboost:: :undefinedmpi 
::referencecommunicator :to: `communicatorboost(:ompi_communicator_t:*mpi 
:const:&,exception :boost::exception:(charmpi :const:*comm_create_kind,) 'int
).'./
core./../libscore//libEspresso.so.:libs /undefinedlibEspresso.so : 
referenceundefined  to reference`boost :to: archive`:vtable: detail:for: 
basic_iarchiveboost::::basic_iarchivempi(:unsigned: exceptionint')
'.
../.core//core./libs./libslibEspresso.so/:libEspresso.so :undefined  
undefinedreference  referenceto  to` `typeinfoboost :for: 
mpiboost::::communicatorarchive::::operatordetail 
:ompi_communicator_t*:(basic_iarchive)'
 ..const/'core
/...libs//core/libEspresso.so.:libs /undefined libEspresso.soreference:  
toundefined  `referenceboost :to: 
`mpiboost::::communicatorarchive:::communicator:(detail:):'shared_ptr_helper
:.:.shared_ptr_helper/(core)/'.
libs./.libEspresso.so/:core /undefined. libs/referencelibEspresso.so :to  
undefined` boostreference: :tompi: 
:`boostexception::::archive~:exception:(detail)':
:.shared_ptr_helper.:/:core~/shared_ptr_helper(.)libs'/
libEspresso.so.:. /undefinedcore /reference.libs /tolibEspresso.so :` 
boostundefined: :referencempi to: 
:`exceptionboost::::~mpiexception:(:)'exception
:.:.exception/(corechar/ .constlibs*/,libEspresso.so :int )undefined' 
reference. .to/ core`/boost.:libs:/archivelibEspresso.so::: detailundefined: 
:reference basic_oarchiveto: :`basic_oarchivevtable( unsignedfor  intboost):':
mpi.:./:coreexception'/
..libs.//libEspresso.socore:/ .undefinedlibs /reference libEspresso.soto :` 
undefinedboost: :referencearchive :to: detail`::typeinfobasic_oarchive :for: 
end_preambleboost():':
archive.:.:/detailcore:/:.basic_iarchivelibs'/
libEspresso.so.:. /undefined corereference/ .tolibs /`libEspresso.sovoid:  
boost:undefined: mpireference: to: 
communicator`:boost::send:<mpiboost::::communicatormpi::::communicator(packed_oarchive)'>
(.int.,/ coreint/,. libsboost/:libEspresso.so::mpi :undefined: 
packed_oarchivereference  constto& )` boostconst:':
mpi.:.:/exceptioncore:/:.~libsexception/(libEspresso.so):' 
undefined. .reference/ coreto/ .`libsboost/:libEspresso.so::mpi :undefined: 
statusreference  boostto: 
:`mpiboost::::communicatormpi::::recvexception<:boost::~:exceptionmpi(:):'packed_iarchive
>.(.int/,core /int.,libs /boostlibEspresso.so::: mpiundefined: :reference 
>packed_iarchiveto& )` boostconst:':
archive.:.:/detailcore:/:.basic_oarchivelibs::/basic_oarchivelibEspresso.so(:unsigned
  undefinedint )reference' 
to. .`/typeinfocore/ .forlibs /boostlibEspresso.so::: mpiundefined: reference: 
exceptionto' 
`.boost.:/:corearchive/:.:libsdetail/::libEspresso.sobasic_oarchive:: 
:undefinedend_preamble (reference) 'to
 .`.boost/:core/:.archivelibs:/:detaillibEspresso.so:::basic_iarchive 
:undefined: ~referencebasic_iarchive (to )`'void
 .boost.:/:corempi/:.:libscommunicator/:libEspresso.so::send <undefinedboost 
:reference: tompi :`:typeinfopacked_oarchive >for( intboost,: :intarchive,: 
:detailboost::::basic_oarchivempi':
:.packed_oarchive. /constcore&/). libsconst/'
libEspresso.so.:. /coreundefined/ .referencelibs /tolibEspresso.so :` 
boostundefined :reference: archiveto: 
:`detailboost::::basic_oarchivempi::::~statusbasic_oarchive (boost):':
mpi::communicator::recv<boost::mpi::packed_iarchive>(int, int, 
boost::mpi::packed_iarchive&) const'
../core/.libs/libEspresso.so: undefined reference to `typeinfo for 
boost::mpi::exception'
../core/.libs/libEspresso.so: undefined reference to `boostcollect2: error: ld 
returned 1 exit status
::archive::detail::basic_iarchive::~basic_iarchive()'
../core/.libs/libEspresso.so: undefined reference to `typeinfo for 
boost::archive::detail::basic_oarchive'
../core/.libs/libEspresso.so: undefined reference to 
`boost::archive::detail::basic_oarchive::~basic_oarchive()'
collect2: error: ld returned 1 exit status
Makefile:888: recipe for target 'Espresso.install' failed
make[3]: *** [Espresso.install] Error 1
make[3]: *** Waiting for unfinished jobs....
Makefile:884: recipe for target 'Espresso' failed
make[3]: *** [Espresso] Error 1
make[3]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=tunableslip/ws/src/tcl'>
Makefile:449: recipe for target 'all-recursive' failed
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=tunableslip/ws/src'>
Makefile:387: recipe for target 'all' failed
make[1]: *** [all] Error 2
make[1]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-multiconfig-compile/myconfig=tunableslip/ws/src'>
Makefile:475: recipe for target 'all-recursive' failed
make: *** [all-recursive] Error 1
+ exit 1
Build step 'Execute shell' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE



reply via email to

[Prev in Thread] Current Thread [Next in Thread]