espressomd-maintainer
[Top][All Lists]
Advanced

[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

[Espressomd-maintainer] Build failed in Jenkins: master-nightly-multicon


From: Jenkins Demon
Subject: [Espressomd-maintainer] Build failed in Jenkins: master-nightly-multiconfig » default,3core #351
Date: Thu, 5 May 2016 04:13:51 +0200 (CEST)

See 
<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=default,parallelism=3core/351/changes>

Changes:

[Florian Weik] cmake: Remove optional MPI from cmake.

[Florian Weik] Removed fake mpi ifdefs.

[Florian Weik] autotools: Removed fake mpi support.

[Florian Weik] mpiio: Removed MPI ifdefs.

[Florian Weik] travis: Removed tests w/o mpi.

------------------------------------------
[...truncated 514 lines...]
  CXX      angle_cossquare.lo
  CXX      angledist.lo
  CXX      dihedral.lo
  CXX      endangledist.lo
  CXX      fene.lo
  CXX      harmonic_dumbbell.lo
  CXX      harmonic.lo
  CXX      quartic.lo
  CXX      overlap.lo
  CXX      umbrella.lo
  CXX      bonded_coulomb.lo
  CXX      subt_lj.lo
  CXX      object-in-fluid/oif_global_forces.lo
  CXX      object-in-fluid/oif_local_forces.lo
  CXX      object-in-fluid/out_direction.lo
  CXX      hydrogen_bond.lo
  CXX      twist_stack.lo
  CXX      debye_hueckel.lo
  CXX      elc.lo
  CXX      magnetic_non_p3m_methods.lo
  CXX      mdlc_correction.lo
  CXX      maggs.lo
  CXX      mmm1d.lo
  CXX      mmm2d.lo
  CXX      mmm-common.lo
  CXX      p3m.lo
  CXX      p3m-common.lo
  CXX      p3m-dipolar.lo
  CXX      reaction_field.lo
  GEN      config-version.cpp
  NVCC     cuda_init_cuda.lo
  NVCC     cuda_common_cuda.lo
  NVCC     electrokinetics_cuda.lo
  NVCC     fd-electrostatics_cuda.lo
  NVCC     lbgpu_cuda.lo
  NVCC     p3m_gpu_cuda.lo
  NVCC     EspressoSystemInterface_cuda.lo
  NVCC     integrate_sd_cuda.lo
  NVCC     integrate_sd_cuda_kernel.lo
  NVCC     integrate_sd_cuda_debug.lo
  NVCC     integrate_sd_matrix.lo
  NVCC     integrate_sd_cuda_device.lo
  NVCC     actor/Mmm1dgpuForce_cuda.lo
  NVCC     actor/EwaldGPU_cuda.lo
  NVCC     actor/HarmonicWell_cuda.lo
  NVCC     immersed_boundary/ibm_cuda.lo
  NVCC     actor/DipolarDirectSum_cuda.lo
  NVCC     actor/HarmonicOrientationWell_cuda.lo
  NVCC     p3m_gpu_error_cuda.lo
  CXX      utils/statistics/RunningAverage.lo
  CXX      object-in-fluid/affinity.lo
  CXX      object-in-fluid/membrane_collision.lo
  CXX      immersed_boundary/ibm_main.lo
  CXX      immersed_boundary/ibm_triel.lo
  CXX      immersed_boundary/ibm_volume_conservation.lo
  CXX      immersed_boundary/ibm_tribend.lo
  CXX      immersed_boundary/ibm_cuda_interface.lo
  CXX      actor/ActorList.lo
  CXX      actor/HarmonicWell.lo
  CXX      actor/HarmonicOrientationWell.lo
  CXX      actor/Mmm1dgpuForce.lo
  CXX      actor/EwaldGPU.lo
  CXX      actor/DipolarDirectSum.lo
  CXX      config-version.lo
  CXXLD    libEspresso.la
make[5]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=default,parallelism=3core/ws/src/core'>
make[4]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=default,parallelism=3core/ws/src/core'>
make[3]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=default,parallelism=3core/ws/src/core'>
Making all in tcl
make[3]: Entering directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=default,parallelism=3core/ws/src/tcl'>
  CXX      bin_tcl.lo
  CXX      binary_file_tcl.lo
  CXX      blockfile_tcl.lo
  CXX      h5mdfile_tcl.lo
  CXX      rotate_system_tcl.lo
  CXX      readpdb_tcl.lo
  CXX      cells_tcl.lo
  CXX      channels_tcl.lo
  CXX      collision_tcl.lo
  CXX      comfixed_tcl.lo
  CXX      comforce_tcl.lo
  CXX      config_tcl.lo
  CXX      constraint_tcl.lo
  CXX      domain_decomposition_tcl.lo
  CXX      electrokinetics_tcl.lo
  CXX      external_potential_tcl.lo
  CXX      energy_tcl.lo
  CXX      galilei_tcl.lo
  CXX      global_tcl.lo
  CXX      grid_tcl.lo
  CXX      iccp3m_tcl.lo
  CXX      imd_tcl.lo
  CXX      initialize_interpreter.lo
  CXX      integrate_tcl.lo
  CXX      interaction_data_tcl.lo
  CXX      lb-boundaries_tcl.lo
  CXX      lb_tcl.lo
  CXX      lees_edwards_tcl.lo
  CXX      metadynamics_tcl.lo
  CXX      nemd_tcl.lo
  CXX      mol_cut_tcl.lo
  CXX      parser.lo
  CXX      particle_data_tcl.lo
  CXX      polymer_tcl.lo
  CXX      pressure_tcl.lo
  CXX      random_tcl.lo
  CXX      reaction_tcl.lo
  CXX      rattle_tcl.lo
  CXX      statistics_chain_tcl.lo
  CXX      statistics_cluster_tcl.lo
  CXX      statistics_correlation_tcl.lo
  CXX      statistics_fluid_tcl.lo
  CXX      statistics_observable_tcl.lo
  CXX      statistics_wallstuff_tcl.lo
  CXX      statistics_tcl.lo
  CXX      thermostat_tcl.lo
  CXX      topology_tcl.lo
  CXX      tuning_tcl.lo
  CXX      uwerr_tcl.lo
  CXX      virtual_sites_com_tcl.lo
  CXX      ghmc_tcl.lo
  CXX      twist_stack_tcl.lo
  CXX      hydrogen_bond_tcl.lo
  CXX      minimize_energy_tcl.lo
  CXX      integrate_sd_tcl.lo
  CXX      mpiio_tcl.lo
  CXX      bmhtf-nacl_tcl.lo
  CXX      buckingham_tcl.lo
  CXX      cos2_tcl.lo
  CXX      dpd_tcl.lo
  CXX      forcecap_tcl.lo
  CXX      gaussian_tcl.lo
  CXX      gb_tcl.lo
  CXX      hat_tcl.lo
  CXX      hertzian_tcl.lo
  CXX      lj_tcl.lo
  CXX      ljangle_tcl.lo
  CXX      ljcos2_tcl.lo
  CXX      ljcos_tcl.lo
  CXX      ljgen_tcl.lo
  CXX      morse_tcl.lo
  CXX      soft_sphere_tcl.lo
  CXX      steppot_tcl.lo
  CXX      tab_tcl.lo
  CXX      tunable_slip_tcl.lo
  CXX      angle_tcl.lo
  CXX      angle_harmonic_tcl.lo
  CXX      angle_cosine_tcl.lo
  CXX      angle_cossquare_tcl.lo
  CXX      angledist_tcl.lo
  CXX      dihedral_tcl.lo
  CXX      endangledist_tcl.lo
  CXX      fene_tcl.lo
  CXX      harmonic_dumbbell_tcl.lo
  CXX      harmonic_tcl.lo
  CXX      quartic_tcl.lo
  CXX      bonded_coulomb_tcl.lo
  CXX      overlap_tcl.lo
  CXX      subt_lj_tcl.lo
  CXX      umbrella_tcl.lo
  CXX      object-in-fluid/oif_global_forces_tcl.lo
  CXX      object-in-fluid/oif_local_forces_tcl.lo
  CXX      object-in-fluid/out_direction_tcl.lo
  CXX      debye_hueckel_tcl.lo
  CXX      elc_tcl.lo
  CXX      magnetic_non_p3m_methods_tcl.lo
  CXX      maggs_tcl.lo
  CXX      mmm1d_tcl.lo
  CXX      mmm2d_tcl.lo
  CXX      p3m-dipolar_tcl.lo
  CXX      p3m_tcl.lo
  CXX      reaction_field_tcl.lo
  CXX      mdlc_correction_tcl.lo
  CXX      cuda_init_tcl.lo
  CXX      Espresso_install-scriptsdir.o
  CXX      Espresso_install-main.o
  NVCC     cuda_workaround.o
  CXX      Espresso-scriptsdir.o
  CXX      Espresso-main.o
  CXX      object-in-fluid/affinity_tcl.lo
  CXX      object-in-fluid/membrane_collision_tcl.lo
  CXX      immersed_boundary/ibm_triel_tcl.lo
  CXX      immersed_boundary/ibm_volume_conservation_tcl.lo
  CXX      immersed_boundary/ibm_tribend_tcl.lo
  CXX      actor/Mmm1dgpu_tcl.lo
  CXX      actor/Ewaldgpu_tcl.lo
  CXX      actor/DipolarDirectSum_tcl.lo
  CXX      actor/HarmonicWell_tcl.lo
  CXX      actor/HarmonicOrientationWell_tcl.lo
  CXXLD    libEspressoTcl.la
  CXXLD    Espresso
  CXXLD    Espresso.install
.../core.//.corelibs//.libEspresso.solibs:/ libEspresso.soundefined:  
referenceundefined  toreference  `toboost 
:`:boostmpi::::mpicommunicator::::communicatorcommunicator:(:ompi_communicator_tcommunicator*(
 ompi_communicator_tconst*& ,const &boost,: 
:boostmpi::::mpicomm_create_kind:):'comm_create_kind
).'.
/.core.//.corelibs//.libEspresso.solibs:/ libEspresso.soundefined:  
referenceundefined  toreference  `toboost 
:`:boostarchive::::archivedetail::::detail:basic_iarchive:::basic_iarchivebasic_iarchive:(:unsignedbasic_iarchive
 (intunsigned) 'int
).'.
/.core.//.corelibs//.libslibEspresso.so/:libEspresso.so :undefined  
undefinedreference  referenceto  to` 
boost`:boost::mpi::mpi::communicator:::communicatoroperator: 
:ompi_communicator_t*operator( )ompi_communicator_t *const()' 
const.'.
./.core//core/..libslibs//libEspresso.solibEspresso.so::  undefinedundefined  
referencereference  toto  
``boostboost::::archivearchive::::detaildetail::::shared_ptr_helpershared_ptr_helper::::shared_ptr_helpershared_ptr_helper(()')
'.
../.core//core./libs/libEspresso.so: undefined reference to 
`boost::archive::detail::shared_ptr_helper::~.shared_ptr_helperlibs(/)'libEspresso.so
:. .undefined/ corereference/ .tolibs /`libEspresso.soboost:: :undefinedarchive 
:reference: detailto: 
:`shared_ptr_helperboost::::~mpi:shared_ptr_helper:()exception':
:.exception.(/charcore /const.*libs,/ libEspresso.soint:) 'undefined
 .reference. /tocore /`.boostlibs:/:libEspresso.sompi:: :undefinedexception 
:reference: exceptionto( char` vtableconst *for,  intboost):':
mpi.:.:/exceptioncore'/
..libs.//libEspresso.socore:/ .undefinedlibs /referencelibEspresso.so :to  
undefined` referencevtable  tofor  `boosttypeinfo: :formpi 
:boost:::exceptionarchive':
:.detail.:/:corebasic_iarchive/'.
libs./.libEspresso.so/:core /undefined. libsreference/ libEspresso.soto:  
undefined` typeinforeference  forto  
boost`:boost::archive::mpi::detail::communicator::basic_iarchive:'communicator
(.).'/
core./../libscore//.libslibEspresso.so/:libEspresso.so :undefined  
undefinedreference  referenceto  to` 
boost`::boostmpi::::mpi:communicator::exception::communicator:(~)exception'(
).'.
/.core.//.corelibs//.libEspresso.solibs:/ libEspresso.soundefined:  
referenceundefined  toreference  `toboost 
:`:boostmpi::::mpiexception::::exception~:exception:(~)exception'(
).'.
/..core//.core/libs./libslibEspresso.so/:libEspresso.so :undefined  
undefinedreference  referenceto  to` 
boost`:boost::mpi::archive::exception::detail::~:exceptionbasic_oarchive(:):'basic_oarchive
(.unsigned. /intcore)/'.
libs./.libEspresso.so/:core /undefined. libsreference/ libEspresso.soto:  
`undefined boostreference: :toarchive 
:`:boostdetail::::archivebasic_oarchive::::detailbasic_oarchive:(:unsigned 
basic_oarchiveint:):'end_preamble
(.).'/
.core.//.corelibs//.libEspresso.solibs:/ libEspresso.soundefined:  
referenceundefined  toreference  `toboost :`:voidarchive 
:boost::detail::mpi::basic_oarchive::communicator::end_preamble:()send'<
boost.:.:/mpicore:/:.packed_oarchivelibs>/(libEspresso.soint:,  undefinedint , 
referenceboost :to: mpi`:void: packed_oarchiveboost :const:&mpi): 
:const'communicator
:.:./sendcore</boost.:libs:/mpilibEspresso.so::: packed_oarchiveundefined> 
(referenceint ,to  int`,boost :boost::mpi::mpi::status: packed_oarchiveboost 
:const:&mpi): :constcommunicator':
:.recv.</boostcore:/:.mpilibs:/:libEspresso.sopacked_iarchive:> (undefinedint , 
referenceint ,to  boost`:boost::mpi::mpi::packed_iarchive:&status)  constboost':
:.mpi.::/communicatorcore:/:.recvlibs</boostlibEspresso.so::: mpiundefined: 
:reference packed_iarchiveto> (`inttypeinfo,  forint boost,: 
:boostmpi::::mpi:exception:'packed_iarchive
&.). /constcore'/
..libs.//libEspresso.socore:/ .undefinedlibs /referencelibEspresso.so :to  
undefined` boostreference: :toarchive :`:typeinfodetail :for: 
basic_iarchiveboost::::~mpibasic_iarchive:(:)exception''

....//corecore//..libslibs//libEspresso.solibEspresso.so::  undefinedundefined  
referencereference  toto  ``boosttypeinfo :for: 
archiveboost:::detail::archive::basic_iarchive::detail::~:basic_iarchivebasic_oarchive(')
'.
../.core//core./libs/.libEspresso.solibs:/ libEspresso.soundefined:  
referenceundefined  toreference  `toboost :`:typeinfoarchive: :fordetail 
:boost:::basic_oarchivearchive::::~detailbasic_oarchive:(:)basic_oarchive''

../core/.libs/libEspresso.so: undefined reference to 
`boost::archive::detail::basic_oarchive::~basic_oarchive()'
collect2: error: ld returned 1 exit status
collect2: error: ld returned 1 exit status
Makefile:883: recipe for target 'Espresso.install' failed
make[3]: *** [Espresso.install] Error 1
make[3]: *** Waiting for unfinished jobs....
Makefile:879: recipe for target 'Espresso' failed
make[3]: *** [Espresso] Error 1
make[3]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=default,parallelism=3core/ws/src/tcl'>
Makefile:446: recipe for target 'all-recursive' failed
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=default,parallelism=3core/ws/src'>
Makefile:384: recipe for target 'all' failed
make[1]: *** [all] Error 2
make[1]: Leaving directory 
'<http://espressomd.org/jenkins/job/master-nightly-multiconfig/myconfig=default,parallelism=3core/ws/src'>
Makefile:472: recipe for target 'all-recursive' failed
make: *** [all-recursive] Error 1
+ exit 1
Build step 'Execute shell' marked build as failure
[WARNINGS] Skipping publisher since build result is FAILURE



reply via email to

[Prev in Thread] Current Thread [Next in Thread]