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Cell-wall interaction using object-in-fluid with espresso 4.1.3


From: Pouyan Keshavarz
Subject: Cell-wall interaction using object-in-fluid with espresso 4.1.3
Date: Wed, 22 Jul 2020 01:37:32 +0000

Dear all,


I have problem in modelling cell-wall interaction with the use of OIF module in espresso 4.1.3 and will be grateful if anybody can help me. More specifically, I face the error below whenever I try to run my code. 

 

"ERROR: The CPU LB does not currently support handling changes of the MD cell geometry. Setup the cell system, skin and interactions before activating the CPU LB.
Traceback (most recent call last):
  File "test11.py", line 108, in <module>
    system.integrator.run(steps=100)
  File "integrate.pyx", line 104, in espressomd.integrate.Integrator.run
  File "utils.pyx", line 265, in espressomd.utils.handle_errors
Exception: Encountered errors during integrate: ERROR: The CPU LB does not currently support handling changes of the MD cell geometry. Setup the cell system, skin and interactions before activating the CPU LB."

It is worth mentioning that when I removed the line related to cell-wall interaction the simulation ran correctly. Also I have been attached the code I used, here.


Thanks in advanced.


Kind regards

Pouyan

 

Attachment: test11.py
Description: test11.py


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