[Gnumed-devel] Mandrake 9.1: similar bootstrap problems

[Michael Bonert]

Hi Everyone:

I thought I'd try to revive my Mandrake 9.1 install.  The GUI is all
ok; gmAbout.py, gmPregCalc.py, gmBMICalc.py all work much the way they did
before.


The bootstrapping is still causing me a headache.

This is what I did:
$ cd /home/michael/gnumed/gnumed/server/bootstrap
$ dropdb gnumed
$ python bootstrap-gm_db_system.py --conf-file=bootstrap-monolithic_core.conf
$ python bootstrap-gm_db_system.py --conf-file=bootstrap-de.conf
$ python bootstrap-gm_db_system.py --conf-file=bootstrap-test_data.conf

(The output (log file) is below for the last step -- the
monolithic_core.conf & de.conf seem to be fine)

Karsten mentioned something about the newest postgresql (whatever is in
Debian 'Sid' -- 7.4?) having some problems.  The fact that I'm still
having problems suggests there is either bug out there somewhere... or I'm
consistently doing something wrong.


Take Care,
Michael



[michael @ stokes .bootstrap-gm_db_system]$ more
bootstrap-gm_db_system.log
2004-01-05 00:44:02
------------------------------------------------------------
2004-01-05 00:44:02 [INFO]
(./modules/gmLog.py::__init__:400): SECURITY: initial log level is [INFO]
2004-01-05 00:44:02 [INFO]
(./modules/gmLog.py::__open_default_log670): instantiated log file
/home/michael/.bootstrap-gm_db_system/
bootstrap-gm_db_system.log with ID
/home/michael/.bootstrap-gm_db_system/bootstrap-gm_db_system.log
2004-01-05 00:44:02 [INFO]
(./modules/gmLog.py::SetAllLogLevels:284): SECURITY: log level change from
[INFO]   to [DATA]
2004-01-05 00:44:02 [DATA]
(./modules/gmCLI.py::Main:139): $Revision: 1.11 $
2004-01-05 00:44:02 [DATA]
(./modules/gmCLI.py::_preparse_cmdline:69): unparsed command line is
>>bootstrap-gm_db_system.py --conf-file=b
ootstrap-test_data.conf<<
2004-01-05 00:44:02 [DATA]  (./modules/gmCLI.py::_parse_opts:132): command
line arguments: {'--conf-file': 'bootstrap-test_data.conf'}
2004-01-05 00:44:02 [DATA]  (./modules/gmPG.py::Main:20): $Revision: 1.86
$
2004-01-05 00:44:02 [DATA]  (./modules/gmPG.py::Main:39): pyPgSQL
version: 2.3
2004-01-05 00:44:02 [INFO]  (./modules/gmPG.py::Main:63): DBMS
"Postgres" via DB-API module "<module 'pyPgSQL.PgSQL' from
'/usr/lib/python
2.2/site-packages/pyPgSQL/PgSQL.pyc'>": API level 2.0, thread safety 1,
parameter style "pyformat"
2004-01-05 00:44:02 [DATA]
(./modules/gmCfg.py::Main:1079): $Revision: 1.68 $
2004-01-05 00:44:02 [DATA]
(./modules/gmCfg.py::__get_conf_name:707): (<aDir=None>, <aName=None>)
2004-01-05 00:44:02 [DATA]
(./modules/gmCfg.py::__get_conf_name:715): found config file
[--conf-file=bootstrap-test_data.conf]
2004-01-05 00:44:02 [DATA]
(./modules/gmCfg.py::__parse_conf_820): parsing config file
[bootstrap-test_data.conf]
2004-01-05 00:44:02 [INFO]
(bootstrap-gm_db_system.py::Main:1248): startup ($Revision: 1.43 $)
2004-01-05 00:44:02 [INFO]
(bootstrap-gm_db_system.py::Main:1253): bootstrapping GnuMed database
system from file [$Source: /cvsroot/gnum
ed/gnumed/gnumed/server/bootstrap/bootstrap-test_data.conf,v $]
($Revision: 1.2 $)
2004-01-05 00:44:06 [INFO]
(bootstrap-gm_db_system.py::bootstrap:816): bootstrapping service [test
data]
2004-01-05 00:44:06 [INFO]
(bootstrap-gm_db_system.py::__init__:477): bootstrapping database [core]
2004-01-05 00:44:06 [INFO]
(bootstrap-gm_db_system.py::__init__:143): bootstrapping server [local
host]
2004-01-05 00:44:06 [WARN]  (./modules/gmCfg.py::get:518): option
<password> not found in group [user postgres]
2004-01-05 00:44:08 [INFO]
(bootstrap-gm_db_system.py::__connect_to_template:186): connecting to
template database
2004-01-05 00:44:08 [INFO]
(bootstrap-gm_db_system.py::__connect_to_template:218): successfully
connected to template database [template1]
2004-01-05 00:44:08 [INFO]
(bootstrap-gm_db_system.py::__bootstrap_db_users:333): bootstrapping
database users and groups
2004-01-05 00:44:08 [WARN]  (./modules/gmCfg.py::get:518): option
<password> not found in group [user GnuMed owner]
2004-01-05 00:44:11 [INFO]
(bootstrap-gm_db_system.py::__user_exists:366): User [gm-dbowner] exists.
2004-01-05 00:44:11 [WARN]  (./modules/gmCfg.py::get:518): option <schema
base directory> not found in group [server local host]
2004-01-05 00:44:11 [WARN]
(bootstrap-gm_db_system.py::_import_schema:1147): no schema files base
directory specified
2004-01-05 00:44:11 [INFO]
(bootstrap-gm_db_system.py::__bootstrap_proc_langs:310): bootstrapping
procedural languages
2004-01-05 00:44:11 [WARN]
(bootstrap-gm_db_system.py::__bootstrap_proc_langs:315): No procedural
languages to activate or error loading
language list.
2004-01-05 00:44:11 [INFO]
(bootstrap-gm_db_system.py::__connect_owner_to_template:588): successfully
connected to template database [template1]
2004-01-05 00:44:11 [INFO]
(bootstrap-gm_db_system.py::__db_exists:645): Database [gnumed] exists.
2004-01-05 00:44:11 [INFO]
(bootstrap-gm_db_system.py::__connect_owner_to_db:628): successfully
connected to database [gnumed]
2004-01-05 00:44:11 [WARN]  (./modules/gmCfg.py::get:518): option <schema
base directory> not found in group [database core]
2004-01-05 00:44:11 [WARN]
(bootstrap-gm_db_system.py::_import_schema:1147): no schema files base
directory specified
2004-01-05 00:44:11 [INFO]
(bootstrap-gm_db_system.py::__service_exists:897): service [historica] not
installed here yet
2004-01-05 00:44:11 [INFO]
(bootstrap-gm_db_system.py::__verify_pg_version:947): installed PostgreSQL
version: [PostgreSQL 7.3.2 on i686-
pc-linux-gnu, compiled by GCC gcc (GCC) 3.2.2 (Mandrake Linux 9.1
3.2.2-3mdk)] - this is fine with me
2004-01-05 00:44:11 [ERROR]
(Psql.py::run:68): ../sql/test-data/gmDemographics-Person-test_data.sql:0: 
cannot
open file
2004-01-05 00:44:11 [ERROR]
(bootstrap-gm_db_system.py::_import_schema:1166): failed to import
[../sql/test-data/gmDemographics-Person-tes
t_data.sql]
2004-01-05 00:44:11 [ERROR]
(bootstrap-gm_db_system.py::bootstrap:849): Cannot import schema
definition for service [test data] into database [core].
2004-01-05 00:44:11 [ERROR]
(bootstrap-gm_db_system.py::exit_with_msg:1238): Cannot bootstrap
services.
2004-01-05 00:44:11 [INFO]
(bootstrap-gm_db_system.py::exit_with_msg:1239): shutdown
address@hidden .bootstrap-gm_db_system]$

-- Software --
- Linux version 2.4.21-0.13mdk (address@hidden) (gcc version
3.2.2 (Mandrake Linux 9.1 3.2.2-3mdk)) #1 Fri Mar 14 15:08:06 EST 2003
- KDE 3.1.0
- PostgreSQL 7.3.2
- Python 2.2.2
- wxPythonGTK (for python 2.2) 2.4.1.2-1
- pyPgSQL 2.3-3

-- Hardware -- same as before