branch master updated (12b04cb -> bf76d98)

[Mark H. Weaver]

mhw pushed a change to branch master
in repository guix.

      from  12b04cb   gnu: Add fasttree.
      adds  2fdcc60   packages: Use %store-directory.
      adds  5ae4169   packages: Use packages from '%final-inputs' as the 
default patch inputs.
      adds  74ed6da   gnu: bison: Add m4 as a native input.
      adds  ba42199   gnu: flex: Add m4 as a native input.
      adds  dedaf76   gnu: flex: Add missing quasiquote.
      adds  94d915d   gnu: base: Fix a bug that occurs in non-Linux systems.
      adds  10ac0f9   gnu: libxml2: Update to 2.9.2.
      adds  7ce3224   gnu: libxml2: Build python bindings separately.
      adds  20a9466   gnu: flex: Fix native-inputs field.
      adds  946007f   gnu: gawk: Update to 4.1.3.
      adds  2068559   gnu: gcc: Move patch upstream status in the patch itself.
      adds  f683d67   gnu: perl: Use 'modify-phases'.
      adds  696062b   gnu: perl: Strip the DSOs.
      adds  67dfa19   gnu: findutils: Use /var as the localstatedir, for 
'updatedb'.
      adds  b15389e   gnu: linux-libre-headers: Do not retain reference to the 
bootstrap tools.
      adds  de4ac32   gnu: Switch to GCC 4.9 as the default compiler.
      adds  8d866b9   gnu: Switch to GCC 4.9 as the default cross-compiler.
      adds  56eba3d   gnu: sed: Set PATH_MAX for Hurd systems.
      adds  f8badf1   gnu: commencement: Use our Binutils as soon as possible.
      adds  30347ca   gnu: guile-static: Use Linux syscalls only on Linux-based 
systems.
      adds  e586525   gnu: make-bootstrap: Adjust gawk patch to 4.1.3.
      adds  8119749   gnu: gcc: Do not add -rpath=LIBDIR/lib64 to the "lib" 
spec.
      adds  9063ef0   gnu: gcc: Add "debug" output, debugging symbols of 
libraries.
      adds  d0b6269   gnu: gcc: Build libbacktrace without -Werror.
      adds  ab999c2   gnu: commencement: Remove "debug" output of GCC-FINAL.
      adds  2a1552c   gnu: cross-base: Do not strip cross-gcc.
      adds  70ca2e9   gnu: which: Update to 2.21.
      adds  1511e02   gnu: nettle: Update to 3.1.1.
      adds  1492801   Merge branch 'master' into core-updates
      adds  16cae79   gnu: patch: Set PATH_MAX for Hurd systems.
      adds  b5616bc   ld-wrapper: Ignore .so files specified after "-plugin" 
for RUNPATH purposes.
      adds  ec29907   gnu: gcc: Build libsanitizer's bundled libbacktrace 
without -Werror.
      adds  bcf2971   Merge branch 'master' into core-updates
      adds  1a802c7   gnu: openssl: Update to 1.0.2c.
      adds  8dca238   gnu: make-bootstrap: Switch to GCC 4.9.
      adds  86d7043   gnu: make-bootstrap: Update patching of gawk's configure.
      adds  1f17585   gnu: make-bootstrap: Build libbacktrace, required by cc1.
      adds  25cc3fe   gnu: gettext: Fix non-deterministic msgunfmt behavior.
      adds  d3b4c13   gnu: tar: Skip tests that rely on undefined unlinkat(2) 
behavior.
      adds  4c10c6c   gnu: sqlite: Update to 3.8.10.2.
      adds  7d02724   Merge branch 'master' into core-updates
      adds  8e28d22   gnu: libtiff: Add fixes for several CVEs.
      adds  a2ee6cb   hydra: Remove GCC 4.7 from the core set, and add 4.9 and 
5.1.
      adds  9ae1e92   gnu: cpio: Fix symlink-bad-length test.
      adds  2abf678   Merge branch 'master' into core-updates
      adds  379d414   gnu: ocaml: Update gcc:lib input to gcc-4.9.
      adds  15b4ffa   Merge branch 'master' into core-updates
      adds  cbfb893   gnu: unrtf: Update to 0.21.9.
      adds  9a6953d   gnu: mdadm: Add compilation fix for gcc-4.9.
      adds  264d57b   gnu: itstool: Add python2-libxml2 to propagated-inputs.
      adds  d80b0d4   gnu: gnome-doc-utils: Add python2-libxml2 to 
native-inputs.
      adds  180a93c   gnu: gsl: Fix poly test on i686.
      adds  194782a   gnu: lame: Build with gcc-4.8 on i686.
      adds  fc9ff91   gnu: jemalloc: Build with gcc-4.8 on i686.
      adds  bf76d98   Merge branch 'master' into core-updates

No new revisions were added by this update.

Summary of changes:
 build-aux/hydra/gnu-system.scm                     |    2 +-
 gnu-system.am                                      |   29 +
 gnu/packages/base.scm                              |   33 +-
 gnu/packages/bison.scm                             |    4 +-
 gnu/packages/commencement.scm                      |   51 +-
 gnu/packages/cpio.scm                              |   14 +-
 gnu/packages/cross-base.scm                        |  204 +++---
 gnu/packages/databases.scm                         |    4 +-
 gnu/packages/flex.scm                              |    2 +
 gnu/packages/gawk.scm                              |    4 +-
 gnu/packages/gcc.scm                               |   44 +-
 gnu/packages/gettext.scm                           |    3 +-
 gnu/packages/glib.scm                              |    1 +
 gnu/packages/gnome.scm                             |    1 +
 gnu/packages/image.scm                             |   21 +-
 gnu/packages/jemalloc.scm                          |    8 +
 gnu/packages/ld-wrapper.in                         |   12 +-
 gnu/packages/linux.scm                             |   25 +-
 gnu/packages/make-bootstrap.scm                    |   22 +-
 gnu/packages/maths.scm                             |    4 +-
 gnu/packages/mp3.scm                               |    8 +
 gnu/packages/nettle.scm                            |    6 +-
 gnu/packages/ocaml.scm                             |    2 +-
 gnu/packages/openssl.scm                           |    4 +-
 .../patches/cpio-fix-symlink-bad-length-test.patch |   44 ++
 gnu/packages/patches/findutils-localstatedir.patch |   14 +
 gnu/packages/patches/gawk-shell.patch              |   18 +-
 gnu/packages/patches/gcc-arm-link-spec-fix.patch   |    4 +
 gnu/packages/patches/gettext-msgunfmt.patch        |   58 ++
 gnu/packages/patches/gsl-poly-test-fix-pt1.patch   |   84 +++
 gnu/packages/patches/gsl-poly-test-fix-pt2.patch   |   27 +
 gnu/packages/patches/guile-linux-syscalls.patch    |   12 +-
 gnu/packages/patches/libtiff-CVE-2012-4564.patch   |   33 +
 gnu/packages/patches/libtiff-CVE-2013-1960.patch   |  148 ++++
 gnu/packages/patches/libtiff-CVE-2013-1961.patch   |  770 ++++++++++++++++++++
 gnu/packages/patches/libtiff-CVE-2013-4231.patch   |   19 +
 gnu/packages/patches/libtiff-CVE-2013-4232.patch   |   20 +
 gnu/packages/patches/libtiff-CVE-2013-4243.patch   |   39 +
 gnu/packages/patches/libtiff-CVE-2013-4244.patch   |   20 +
 .../patches/libtiff-CVE-2014-8127-pt1.patch        |   30 +
 .../patches/libtiff-CVE-2014-8127-pt2.patch        |   42 ++
 .../patches/libtiff-CVE-2014-8127-pt3.patch        |   45 ++
 .../patches/libtiff-CVE-2014-8127-pt4.patch        |  295 ++++++++
 .../patches/libtiff-CVE-2014-8128-pt1.patch        |   32 +
 .../patches/libtiff-CVE-2014-8128-pt2.patch        |   83 +++
 .../patches/libtiff-CVE-2014-8128-pt3.patch        |   34 +
 .../patches/libtiff-CVE-2014-8128-pt4.patch        |   77 ++
 .../patches/libtiff-CVE-2014-8128-pt5.patch        |   16 +
 gnu/packages/patches/libtiff-CVE-2014-8129.patch   |   45 ++
 gnu/packages/patches/libtiff-CVE-2014-9330.patch   |   47 ++
 gnu/packages/patches/libtiff-CVE-2014-9655.patch   |   88 +++
 gnu/packages/patches/mdadm-gcc-4.9-fix.patch       |   38 +
 gnu/packages/patches/patch-hurd-path-max.patch     |   48 ++
 gnu/packages/patches/sed-hurd-path-max.patch       |   34 +
 gnu/packages/patches/tar-d_ino_in_dirent-fix.patch |   33 +
 .../patches/tar-skip-unreliable-tests.patch        |   32 +
 gnu/packages/perl.scm                              |   53 +-
 gnu/packages/unrtf.scm                             |   46 +-
 gnu/packages/xml.scm                               |   58 +-
 guix/packages.scm                                  |   12 +-
 60 files changed, 2736 insertions(+), 270 deletions(-)
 create mode 100644 gnu/packages/patches/cpio-fix-symlink-bad-length-test.patch
 create mode 100644 gnu/packages/patches/findutils-localstatedir.patch
 create mode 100644 gnu/packages/patches/gettext-msgunfmt.patch
 create mode 100644 gnu/packages/patches/gsl-poly-test-fix-pt1.patch
 create mode 100644 gnu/packages/patches/gsl-poly-test-fix-pt2.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2012-4564.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2013-1960.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2013-1961.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2013-4231.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2013-4232.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2013-4243.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2013-4244.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2014-8127-pt1.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2014-8127-pt2.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2014-8127-pt3.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2014-8127-pt4.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2014-8128-pt1.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2014-8128-pt2.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2014-8128-pt3.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2014-8128-pt4.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2014-8128-pt5.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2014-8129.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2014-9330.patch
 create mode 100644 gnu/packages/patches/libtiff-CVE-2014-9655.patch
 create mode 100644 gnu/packages/patches/mdadm-gcc-4.9-fix.patch
 create mode 100644 gnu/packages/patches/patch-hurd-path-max.patch
 create mode 100644 gnu/packages/patches/sed-hurd-path-max.patch
 create mode 100644 gnu/packages/patches/tar-d_ino_in_dirent-fix.patch
 create mode 100644 gnu/packages/patches/tar-skip-unreliable-tests.patch