branch master updated (e8df8f4 -> a17d456)

[Eric Bavier]

bavier pushed a change to branch master
in repository guix.

      from  e8df8f4   gnu: Add python-flake8.
       new  7362371   gnu: python-mccabe: Fix license field.
       new  ce7d9c9   gnu: hwloc: Upgrade to 1.10.1.
       new  579f5c8   gnu: hwloc: Move numactl to inputs.
       new  38f0a2b   gnu: openmpi: Upgrade to 1.8.5.
       new  6c79854   gnu: Update scotch to 6.0.4.
       new  d6602ee   gnu: scotch, pt-scotch: Use modify-phases.
       new  cf0ec6c   gnu: scotch, pt-scotch: Build esmumps libraries.
       new  e1ff597   gnu: Add ScaLAPACK.
       new  700ff22   gnu: Add p4est.
       new  aa75ad0   gnu: Add METIS.
       new  cec8642   gnu: Add MUMPS.
       new  9a899cc   gnu: petsc: Upgrade to 3.6.0.
       new  8c94c88   gnu: Add arpack-ng-openmpi.
       new  a7f0141   gnu: Add SLEPc.
       new  a17d456   gnu: Add deal.II.

The 15 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.


Summary of changes:
 gnu-system.am                                      |    5 +-
 gnu/packages/maths.scm                             |  594 +++++++++++++++++--
 gnu/packages/mpi.scm                               |   54 +-
 gnu/packages/patches/dealii-p4est-interface.patch  |   62 ++
 .../patches/hwloc-gather-topology-lstopo.patch     |   13 +
 gnu/packages/patches/mumps-build-parallelism.patch |   13 +
 gnu/packages/patches/petsc-fix-threadcomm.patch    |   15 -
 .../patches/pt-scotch-build-parallelism.patch      |   13 +
 gnu/packages/patches/scotch-test-threading.patch   |  131 +----
 gnu/packages/python.scm                            |    2 +-
 10 files changed, 676 insertions(+), 226 deletions(-)
 create mode 100644 gnu/packages/patches/dealii-p4est-interface.patch
 create mode 100644 gnu/packages/patches/hwloc-gather-topology-lstopo.patch
 create mode 100644 gnu/packages/patches/mumps-build-parallelism.patch
 delete mode 100644 gnu/packages/patches/petsc-fix-threadcomm.patch
 create mode 100644 gnu/packages/patches/pt-scotch-build-parallelism.patch