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95/103: gnu: python2-pbcore: Fix inputs:
From: |
Hartmut Goebel |
Subject: |
95/103: gnu: python2-pbcore: Fix inputs: |
Date: |
Tue, 25 Oct 2016 17:44:46 +0000 (UTC) |
htgoebel pushed a commit to branch wip-python-build-system
in repository guix.
commit 041e0f681ff88a4c2c9f09873a6cf917689d1282
Author: Hartmut Goebel <address@hidden>
Date: Sun Oct 23 21:20:46 2016 +0200
gnu: python2-pbcore: Fix inputs:
* gnu/packages/bioinformatics.scm (python2-pbcore) [inputs] change to
[propagated-inputs]. [native-inputs]: Remove python-docutils, which
comes with sphinx. [former propagated-inputs]: move all (which is only
pyxb) to [inputs].
---
gnu/packages/bioinformatics.scm | 10 ++++------
1 file changed, 4 insertions(+), 6 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 4ff8200..09ab423 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3467,17 +3467,15 @@ interrupted by stop codons. OrfM finds and prints
these ORFs.")
"1kjmv891d6qbpp4shhhvkl02ff4q5xlpnls2513sm2cjcrs52f1i"))))
(build-system python-build-system)
(arguments `(#:python ,python-2)) ; pbcore requires Python 2.7
- (inputs
+ (propagated-inputs
`(("python-cython" ,python2-cython)
("python-numpy" ,python2-numpy)
("python-pysam" ,python2-pysam)
("python-h5py" ,python2-h5py)))
(native-inputs
- `(("python-docutils" ,python2-docutils)
- ("python-nose" ,python2-nose)
- ("python-sphinx" ,python2-sphinx)))
- (propagated-inputs
- `(("python-pyxb" ,python2-pyxb)))
+ `(("python-nose" ,python2-nose)
+ ("python-sphinx" ,python2-sphinx)
+ ("python-pyxb" ,python2-pyxb)))
(home-page "http://pacificbiosciences.github.io/pbcore/")
(synopsis "Library for reading and writing PacBio data files")
(description
- 70/103: gnu: python-numpydoc: Correct inputs., (continued)
- 70/103: gnu: python-numpydoc: Correct inputs., Hartmut Goebel, 2016/10/25
- 75/103: gnu: python-configobj: Correct inputs., Hartmut Goebel, 2016/10/25
- 76/103: gnu: python-zope-security: Correct inputs., Hartmut Goebel, 2016/10/25
- 77/103: gnu: python-websocket-client: Correct inputs., Hartmut Goebel, 2016/10/25
- 78/103: gnu: python-wsgi-intercept: Correct inputs., Hartmut Goebel, 2016/10/25
- 79/103: gnu: python-urllib3: update comment., Hartmut Goebel, 2016/10/25
- 81/103: gnu: Remove some outdated comments., Hartmut Goebel, 2016/10/25
- 87/103: gnu: python-prompt-toolkit: Correct inputs, Hartmut Goebel, 2016/10/25
- 91/103: gnu: python-sphinxcontrib-newsfeed: Remove needless input., Hartmut Goebel, 2016/10/25
- 90/103: gnu: python-nautilus: Correct inputs, Hartmut Goebel, 2016/10/25
- 95/103: gnu: python2-pbcore: Fix inputs:,
Hartmut Goebel <=
- 99/103: gnu: python-tables: Remove python byte-code files from source., Hartmut Goebel, 2016/10/25
- 96/103: gnu: python-pytest-django: Remove needless propagated input "python-py"., Hartmut Goebel, 2016/10/25
- 93/103: gnu: khal: Fix build., Hartmut Goebel, 2016/10/25
- 97/103: gnu: python-flake8: Remove python byte-code files from source., Hartmut Goebel, 2016/10/25
- 11/103: gnu: Remove python-setuptools and python2-setuptools from inputs (part 1a), Hartmut Goebel, 2016/10/25
- 103/103: Add a FIXME comment, Hartmut Goebel, 2016/10/25
- 101/103: Add a series of FIXME and TODO comments., Hartmut Goebel, 2016/10/25
- 89/103: gnu: python-freezegun: Correct input., Hartmut Goebel, 2016/10/25
- 86/103: gnu: python-pika: Correct input., Hartmut Goebel, 2016/10/25
- 19/103: gnu: Fix python inputs, part 1: all inputs become propagated-inputs., Hartmut Goebel, 2016/10/25