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43/49: gnu: r-genomation: Update to 1.6.0.
From: |
Ricardo Wurmus |
Subject: |
43/49: gnu: r-genomation: Update to 1.6.0. |
Date: |
Wed, 26 Oct 2016 07:29:07 +0000 (UTC) |
rekado pushed a commit to branch master
in repository guix.
commit 51c3c4900fabf4762440a7840bd74b1d7a9c1eb7
Author: Ricardo Wurmus <address@hidden>
Date: Wed Oct 26 09:16:27 2016 +0200
gnu: r-genomation: Update to 1.6.0.
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.6.0.
[propagated-inputs]: Add r-rcpp, r-htslib, r-runit, r-s4vectors.
[inputs]: Add zlib.
---
gnu/packages/bioinformatics.scm | 10 ++++++++--
1 file changed, 8 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 78eb801..f238988 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -6783,13 +6783,13 @@ reference point and sorted by a user defined feature.")
(define-public r-genomation
(package
(name "r-genomation")
- (version "1.4.2")
+ (version "1.6.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "genomation" version))
(sha256
(base32
- "017hxh3yhizlsswd2vw8504arkckrcgq5zraiw67lldq9wzs5qzg"))))
+ "1m4mz7wihj8yqivwkzw68div8ybk4rjsai3ffki7xp7sh21ax03y"))))
(build-system r-build-system)
(propagated-inputs
`(("r-biostrings" ,r-biostrings)
@@ -6805,11 +6805,17 @@ reference point and sorted by a user defined feature.")
("r-matrixstats" ,r-matrixstats)
("r-plotrix" ,r-plotrix)
("r-plyr" ,r-plyr)
+ ("r-rcpp" ,r-rcpp)
("r-readr" ,r-readr)
("r-reshape2" ,r-reshape2)
+ ("r-rhtslib" ,r-rhtslib)
("r-rsamtools" ,r-rsamtools)
("r-rtracklayer" ,r-rtracklayer)
+ ("r-runit" ,r-runit)
+ ("r-s4vectors" ,r-s4vectors)
("r-seqpattern" ,r-seqpattern)))
+ (inputs
+ `(("zlib" ,zlib)))
(home-page "http://bioinformatics.mdc-berlin.de/genomation/")
(synopsis "Summary, annotation and visualization of genomic data")
(description
- 11/49: gnu: r-category: Update to 2.40.0., (continued)
- 11/49: gnu: r-category: Update to 2.40.0., Ricardo Wurmus, 2016/10/26
- 14/49: gnu: r-systempiper: Update to 1.8.1., Ricardo Wurmus, 2016/10/26
- 15/49: gnu: r-grohmm: Update to 1.8.0., Ricardo Wurmus, 2016/10/26
- 30/49: gnu: r-biocparallel: Update to 1.8.0., Ricardo Wurmus, 2016/10/26
- 20/49: gnu: r-iranges: Update to 2.8.0., Ricardo Wurmus, 2016/10/26
- 26/49: gnu: r-genomicranges: Update to 1.26.1., Ricardo Wurmus, 2016/10/26
- 33/49: gnu: r-summarizedexperiment: Update to 1.4.0., Ricardo Wurmus, 2016/10/26
- 41/49: gnu: r-impute: Update to 1.48.0., Ricardo Wurmus, 2016/10/26
- 32/49: gnu: r-rsamtools: Update to 1.26.1., Ricardo Wurmus, 2016/10/26
- 37/49: gnu: r-go-db: Update to 3.4.0., Ricardo Wurmus, 2016/10/26
- 43/49: gnu: r-genomation: Update to 1.6.0.,
Ricardo Wurmus <=
- 42/49: gnu: r-seqpattern: Update to 1.6.0., Ricardo Wurmus, 2016/10/26
- 25/49: gnu: r-xvector: Update to 0.14.0., Ricardo Wurmus, 2016/10/26
- 44/49: gnu: r-seqlogo: Update to 1.40.0., Ricardo Wurmus, 2016/10/26
- 28/49: gnu: r-annotationdbi: Update to 1.36.0., Ricardo Wurmus, 2016/10/26
- 39/49: gnu: r-topgo: Update to 2.26.0., Ricardo Wurmus, 2016/10/26
- 34/49: gnu: r-genomicalignments: Update to 1.10.0., Ricardo Wurmus, 2016/10/26
- 35/49: gnu: r-rtracklayer: Update to 1.34.0., Ricardo Wurmus, 2016/10/26
- 38/49: gnu: r-graph: Update to 1.52.0., Ricardo Wurmus, 2016/10/26
- 48/49: gnu: r-bamsignals: Update to 1.6.0., Ricardo Wurmus, 2016/10/26
- 40/49: gnu: r-bsgenome: Update to 1.42.0., Ricardo Wurmus, 2016/10/26