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48/63: gnu: r-mutationalpatterns: Update to 1.2.0.
From: |
Roel Janssen |
Subject: |
48/63: gnu: r-mutationalpatterns: Update to 1.2.0. |
Date: |
Fri, 28 Apr 2017 05:06:07 -0400 (EDT) |
roelj pushed a commit to branch master
in repository guix.
commit cf4ac4e46513cf23e0217d7ddd55ee794b824d9f
Author: Roel Janssen <address@hidden>
Date: Fri Apr 28 10:47:53 2017 +0200
gnu: r-mutationalpatterns: Update to 1.2.0.
* gnu/packages/bioinformatics.scm (r-mutationalpatterns):
[source]: Update to 1.2.0,
[propagated-inputs]: Add r-bsgenome-hsapiens-1000genomes-hs37d5,
r-bsgenome-hsapiens-ucsc-hg19.
---
gnu/packages/bioinformatics.scm | 6 ++++--
1 file changed, 4 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 4730679..8f1e3e1 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7739,18 +7739,20 @@ library implementing most of the pipeline's features.")
(define-public r-mutationalpatterns
(package
(name "r-mutationalpatterns")
- (version "1.0.0")
+ (version "1.2.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "MutationalPatterns" version))
(sha256
(base32
- "1a3c2bm0xx0q4gf98jiw74msmdf2fr8rbsdysd5ww9kqlzmsbr17"))))
+ "00jh1qklj8jb9j7mwvkfybq368h2wg9yc2cwkgb7yb9vsw72r61d"))))
(build-system r-build-system)
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
("r-biostrings" ,r-biostrings)
+ ("r-bsgenome-hsapiens-1000g" ,r-bsgenome-hsapiens-1000genomes-hs37d5)
+ ("r-bsgenome-hsapiens-ucsc-hg19" ,r-bsgenome-hsapiens-ucsc-hg19)
("r-genomicranges" ,r-genomicranges)
("r-genomeinfodb" ,r-genomeinfodb)
("r-ggplot2" ,r-ggplot2)
- 28/63: gnu: r-annotationdbi: Update to 1.38.0., (continued)
- 28/63: gnu: r-annotationdbi: Update to 1.38.0., Roel Janssen, 2017/04/28
- 29/63: gnu: r-biomart: Update to 2.32.0., Roel Janssen, 2017/04/28
- 16/63: gnu: r-biocstyle: Update to 2.4.0., Roel Janssen, 2017/04/28
- 10/63: gnu: r-shortread: Update to 1.34.0., Roel Janssen, 2017/04/28
- 34/63: gnu: r-genomicalignments: Update to 1.12.0., Roel Janssen, 2017/04/28
- 41/63: gnu: r-seqpattern: Update to 1.8.0., Roel Janssen, 2017/04/28
- 55/63: gnu: r-mzr: Update to 2.10.0., Roel Janssen, 2017/04/28
- 60/63: gnu: r-pcamethods: Update to 1.68.0., Roel Janssen, 2017/04/28
- 24/63: gnu: r-limma: Update to 3.32.0., Roel Janssen, 2017/04/28
- 21/63: gnu: r-genomeinfodb: Update to 1.12.0., Roel Janssen, 2017/04/28
- 48/63: gnu: r-mutationalpatterns: Update to 1.2.0.,
Roel Janssen <=
- 49/63: gnu: r-tximport: Update to 1.4.0., Roel Janssen, 2017/04/28
- 63/63: gnu: r-preprocesscore: Update to 1.38.0., Roel Janssen, 2017/04/28
- 46/63: gnu: r-rhtslib: Update to 1.8.0., Roel Janssen, 2017/04/28
- 32/63: gnu: r-rsamtools: Update to 1.28.0., Roel Janssen, 2017/04/28
- 31/63: gnu: r-biostrings: Update to 2.44.0., Roel Janssen, 2017/04/28
- 36/63: gnu: r-genomicfeatures: Update to 1.28.0., Roel Janssen, 2017/04/28
- 19/63: gnu: r-s4vectors: Update to 0.14.0., Roel Janssen, 2017/04/28
- 38/63: gnu: r-topgo: Update to 2.28.0., Roel Janssen, 2017/04/28
- 42/63: gnu: r-genomation: Update to 1.8.0., Roel Janssen, 2017/04/28
- 50/63: gnu: r-rhdf5: Update to 2.20.0., Roel Janssen, 2017/04/28