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branch core-updates updated (259b4f3 -> 2dd1292)
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From: |
Marius Bakke |
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Subject: |
branch core-updates updated (259b4f3 -> 2dd1292) |
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Date: |
Sun, 19 Nov 2017 09:05:03 -0500 (EST) |
mbakke pushed a change to branch core-updates
in repository guix.
from 259b4f3 gnu: mesa: Update to 17.2.5.
adds ada53b1 Revert "gnu: itstool: Update to 2.0.4."
adds 1d84500 gnu: conda: Fix environment scripts.
adds 72df48d gnu: Add kodi-cli.
adds 15d44df gnu: address@hidden: Update to 4.4.96.
adds 336b8d4 gnu: address@hidden: Update to 4.9.60.
adds 0f3142e gnu: linux-libre: Update to 4.13.11.
adds 81e0b62 gnu: Add r-ggrepel.
adds 6b968c4 gnu: Add r-corrplot.
adds bc409c8 gnu: r-lazyeval: Update to 0.2.1.
adds b5a2f37 gnu: r-pryr: Update to 0.1.3
adds 0a123e0 gnu: r-data-table: Update to 1.10.4-3.
adds fde66e3 gnu: r-multitaper: Update to 1.0-14.
adds 116e983 gnu: r-checkmate: Update to 1.8.5.
adds c8818f5 gnu: r-irlba: Update to 2.3.1.
adds 1fb415c gnu: r-purrr: Update to 0.2.4.
adds 1fe7566 gnu: r-robustbase: Update to 0.92-8.
adds fd9afcf gnu: r-quantreg: Update to 5.34.
adds a6ec5b7 gnu: r-withr: Update to 2.1.0.
adds a8a2871 gnu: r-glue: Update to 1.2.0.
adds 1a1b4f0 gnu: r-proxy: Update to 0.4-19.
adds 8407822 gnu: r-bbmle: Update to 1.0.20.
adds b12c6a6 gnu: r-ape: Update to 5.0.
adds 416ad6f gnu: iso-codes: Update to 3.76.
adds 66865ab gnu: multiqc: Update to 1.3.
adds 1695bd7 gnu: address@hidden: Update to 1.5.3.
adds d94c679 gnu: re2: Update to 2017-11-01.
adds ad25310 gnu: ldb: Update to 1.3.0.
adds f1ae27b gnu: samba: Update to 4.7.1.
adds d3f1402 gnu: sssd: Disable failing test.
adds 171ba24 gnu: diamond: Update to 0.9.12.
adds 46dea12 gnu: icedtea: Update to 3.6.0 [security fixes].
adds 9f5bd38 gnu: extra-cmake-modules: Install pri-files into lib/qt5/.
adds 6211aad gnu: kde-frameworks: Update to 5.39.0.
adds fa274ab gnu: kimageformats: Update comment.
adds 5bc1efd gnu: kdelibs4support: Make test kstandarddirstest pass.
adds b1beb16 gnu: krunner: Make some tests pass.
adds e873773 gnu: solid: Enable building interface for qml.
adds 571f1fa gnu: libksysguard: Update to 5.11.2.
adds 39d1a42 gnu: kactivities: Move to tier 2.
adds a7dc855 gnu: kdewebkit: Move to be in alphabetical order.
adds 1289001 gnu: prison: Move to be in alphabetical order.
adds 50c229c gnu: fio: Update to 3.1.
adds 6692d84 guix: records: Add match-record.
adds b6d2930 services: Add murmur.
adds 21b71b0 services: Add 'description' fields.
adds 3c41b99 gnu: feh: Update to 2.22.
adds 7561be8 gnu: fio: Update to 3.2.
adds 68488f2 gnu: vte: Update to 0.50.2.
adds 08d6139 gnu: gnome-terminal: Update to 3.26.2.
adds 8d2bde8 gnu: lollypop: Update to 0.9.304.
adds ca1ddce gnu: weston: Update to 3.0.0.
adds 540dd1c gnu: retroarch: Enable Wayland support.
adds 7ed93a6 gnu: calibre: Update to 3.11.1.
adds 2e15906 gnu: Add python-dukpy, python2-dukpy.
adds bf4a40d gnu: calibre: Add python2-dukpy as an input.
adds 9132212 gnu: calibre: Add optipng as an input.
adds 743d3f6 gnu: calibre: Install mimetypes.
adds e55c46b gnu: python-decorator: Update to 4.1.2.
adds 7c5cc40 gnu: add disorderfs.
adds 39f2433 gnu: sdl2: Update to 2.0.7 and enable Wayland backend.
adds aa70cf8 gnu: redis: Update to 4.0.2.
adds 9505877 gnu: emacs-neotree: Update to 0.5.2.
adds 5fa1b41 gnu: emacs-which-key: Update to 3.0.2.
adds 77a7891 gnu: emacs-undo-tree: Update to 0.6.6.
adds db574f7 gnu: emacs-slime: Use correct Texinfo commands in the
description.
adds 511d8a0 gnu: emacs-evil: Update to 1.2.13.
adds bf56082 gnu: netsurf-buildsystem: Update to 1.6.
adds 84dec7a gnu: hubbub: Update to 0.3.4.
adds e33f6ef gnu: libwapcaplet: Update to 0.4.0.
adds 036f47a gnu: libdom: Update to 0.3.2.
adds b20d97f gnu: libsvgtiny: Update to 0.1.6.
adds f379c52 gnu: libnsgif: Update to 0.2.0.
adds 772588b gnu: libnspsl: Update to 0.1.2.
adds d8799bd gnu: netsurf: Update to 3.7.
adds 73cd402 gnu: borg: Update to 1.1.2.
adds 08e1f38 gnu: emacs-undo-tree: Parameterize source uri.
adds 8f4e3b9 gnu: aria2: Update to 1.33.0.
adds fd592a1 gnu: youtube-dl: Update to 2017.11.06.
adds 9371600 gnu: libxres: Update to 1.2.0.
adds ab8757c gnu: dtc: Update to 1.4.5.
adds 12c613b gnu: dtc: Build python bindings.
adds d298e76 gnu: perl-test-www-mechanize-psgi: Update source uri.
adds 2ac42fe gnu: uboot: Fix same-arch? check.
adds f694818 linux: Add omap2plus generic kernel.
adds dd208b9 bootloaders: uboot: Add .img and MLO files to binary
outputs.
adds b1a3079 system: vm: Use 2^32 - 1 as hash size.
adds 10b159a gnu: u-boot: Only install 'MLO' output if it exists.
adds 6a53490 gnu: libuninameslist: Update to 20170807.
adds 913027f gnu: nnn: Update to 1.5.
adds 0ad5f80 Fix ambiguous imports.
adds c9405c4 compile: Fix VPATH builds.
adds 96dc8f3 packages: 'fold-packages' takes #:select? parameter.
adds 8e57e41 refresh: Account for hidden packages.
adds ea0421b gnu: Add python-jsonrpclib-pelix.
adds 47bd32d gnu: electrum: Update to 3.0.
adds d935e6a gnu: Add faba-icon-theme.
adds 8b0e417 gnu: moka-icon-theme: Simplify package definition.
adds 550281f gnu: moka-icon-theme: Add faba-icon-theme as propagated
input.
adds fedde43 gnu: moka-icon-theme: Fix license.
adds a0e4b41 gnu: guile-git: Update snapshot.
adds 89618fa build: Conditionally build json importer.
adds 6b46b04 import: utils: Add string helpers.
adds 84dfdc5 import: cran: Add support for Bioconductor 3.6.
adds 27baf50 import: cran: Use Bioconductor 3.6 helpers.
adds 25e51b1 guix: Add archive support for bioconductor-uri.
adds 8ca2b2b gnu: r-rgraphviz: Update to 2.22.0.
adds a40a04f gnu: Add r-stringdist.
adds 7373b41 gnu: r-bioccheck: Update to 1.14.0.
adds c7782c3 gnu: r-biocviews: Update to 1.46.0.
adds 94fd86e gnu: r-dnacopy: Update to 1.52.0.
adds 2d4e887 gnu: r-annotate: Update to 1.56.0.
adds cb4d3ff gnu: r-geneplotter: Update to 1.56.0.
adds 554fac7 gnu: r-genefilter: Update to 1.60.0.
adds 0166dc0 gnu: r-deseq2: Update to 1.18.0.
adds 3fd010f gnu: r-dexseq: Update to 1.24.0.
adds 727706a gnu: r-annotationforge: Update to 1.20.0.
adds c25154e gnu: r-rbgl: Update to 1.54.0.
adds 1d0263b gnu: r-rhtslib: Update to 1.10.0.
adds 5c18470 gnu: r-zlibbioc: Update to 1.24.0.
adds da153b7 gnu: r-bamsignals: Update to 1.10.0.
adds 19e8929 gnu: r-tximport: Update to 1.6.0.
adds e6b332d gnu: r-rhdf5: Update to 2.22.0.
adds 598dacf gnu: r-annotationfilter: Update to 1.2.0.
adds c126ba6 gnu: r-copywriter: Update to 2.10.0.
adds 91e1867 gnu: r-methylkit: Update to 1.4.0.
adds fad7c0c gnu: r-sva: Update to 3.26.0.
adds 9f52e53 gnu: r-gseabase: Update to 1.40.0.
adds b537552 gnu: r-systempiper: Update to 1.12.0.
adds 843826e gnu: r-shortread: Update to 1.36.0.
adds 704fe4d gnu: r-grohmm: Update to 1.12.0.
adds d61fc4e gnu: r-biocgenerics: Update to 0.24.0.
adds 3241461 gnu: r-biocinstaller: Update to 1.28.0.
adds 2167eaf gnu: r-biocstyle: Update to 2.6.0.
adds 41f0f94 gnu: r-s4vectors: Update to 0.16.0.
adds 9e482c2 gnu: r-iranges: Update to 2.12.0.
adds 8aab023 gnu: r-genomeinfodb: Update to 1.14.0.
adds 7f1bac3 gnu: r-variantannotation: Update to 1.24.0.
adds f642c0e gnu: r-limma: Update to 3.34.0.
adds 2b6ae8b gnu: r-xvector: Update to 0.18.0.
adds aa5c1f6 gnu: r-genomicranges: Update to 1.30.0.
adds ca52123 gnu: r-biobase: Update to 2.38.0.
adds 0f8d98f gnu: r-annotationdbi: Update to 1.40.0.
adds b719435 gnu: r-biostrings: Update to 2.46.0.
adds f806841 gnu: r-rsamtools: Update to 1.30.0.
adds cb0a9a7 gnu: r-delayedarray: Update to 0.4.1.
adds 6fcbed7 gnu: r-summarizedexperiment: Update to 1.8.0.
adds 96fb465 gnu: r-genomicalignments: Update to 1.14.0.
adds aeb7387 gnu: r-graph: Update to 1.56.0.
adds d13a3fe gnu: r-topgo: Update to 2.30.0.
adds e67850b gnu: r-bsgenome: Update to 1.46.0.
adds 0f948b1 gnu: r-seqpattern: Update to 1.10.0.
adds e6ce4bf gnu: r-impute: Update to 1.52.0.
adds e127c91 gnu: r-genomation: Update to 1.10.0.
adds 6177008 gnu: r-seqlogo: Update to 1.44.0.
adds 9a665df gnu: r-protgenerics: Update to 1.10.0.
adds dad5f83 gnu: r-affy: Update to 1.56.0.
adds 8a8138d gnu: r-affyio: Update to 1.48.0.
adds a998c9a gnu: r-pcamethods: Update to 1.70.0.
adds 531e809 gnu: r-aroma-light: Update to 3.8.0.
adds 8140f68 gnu: r-deseq: Update to 1.30.0.
adds 22752be gnu: r-msnid: Update to 1.11.0.
adds 0096127 gnu: r-edaseq: Update to 2.12.0.
adds 1567c8d gnu: r-interactivedisplaybase: Update to 1.16.0.
adds 87fa5af gnu: r-fastseq: Update to 1.24.0.
adds 98791c2 gnu: r-qvalue: Update to 2.10.0.
adds ce59d62 gnu: r-motifrg: Update to 1.22.0.
adds 007424b gnu: r-motifrg: Rename input label.
adds 1be0f53 gnu: r-vsn: Update to 3.46.0.
adds aced057 gnu: r-rlang: Update to 0.1.4.
adds ecfe98a gnu: r-openssl: Update to 0.9.8.
adds e7f680f gnu: r-r-utils: Update to 2.6.0.
adds 689edf1 gnu: r-preprocesscore: Update to 1.40.0.
adds 65a8cd6 gnu: r-lubridate: Update to 1.7.1.
adds 2404cc4 gnu: r-category: Update to 2.44.0.
adds eb3f5cc gnu: r-gostats: Update to 2.44.0.
adds 010ab2f gnu: r-edger: Update to 3.20.1.
adds 42e11d3 gnu: r-biomart: Update to 2.34.0.
adds a044c7f gnu: r-biocparallel: Update to 1.12.0.
adds 4dd469e gnu: r-rtracklayer: Update to 1.38.0.
adds 74248d2 gnu: Add r-rmysql.
adds 158b674 gnu: r-genomicfeatures: Update to 1.30.0.
adds eeaa696 gnu: r-chipseq: Update to 1.28.0.
adds b500dbc gnu: r-mzid: Update to 1.16.0.
adds 34b9675 gnu: r-mzr: Update to 2.12.0.
adds 15ca195 gnu: r-mzr: Remove bundled copy of boost.
adds 14b3c71 gnu: r-annotationhub: Update to 2.10.0.
adds 39d9098 gnu: r-mutationalpatterns: Update to 1.4.0.
adds baa00ee gnu: r-msnbase: Update to 2.4.0.
adds 60ec9da gnu: r-tidyselect: Update to 0.2.3.
adds 9ecc4c6 gnu: r-servr: Update to 0.8.
adds a954010 gnu: antlr3-3.3: Prettify build phases.
adds 3121814 gnu: Add r-keggrest.
adds e160aa1 gnu: Add r-gage.
adds ad54924 gnu: expect: Change home-page to
http://expect.sourceforge.net/.
adds b5033c5 hydra: Factorize package list creation.
adds 25a5b18 hydra: Build hidden packages.
adds 950d8e5 gnu: gdm: Fix config file path.
adds 51bc835 gnu: gdm: Add configure flags for better defaults.
adds 3eda8dd services: gdm: Add environment variables.
adds db0164b gnu: awesome: Update to 4.2.
adds 63b7fbe gnu: diffoscope: Update to 88.
adds fd23d25 gnu: Add PSM.
adds 7bc05ef gnu: libfabric: Add dependency on PSM.
adds f4433d0 gnu: openmpi: Add dependency on PSM.
adds b574cee hydra: Add jobs for all of '%final-inputs'.
adds 6541673 gnu: linux: Fix kconfig selection.
adds 2f17187 gnu: mediainfo: Change order of custom phases.
adds 174807b gnu: gnupg: Update to 2.2.2.
adds b516b78 gnu: psm: Limit supported systems.
adds 9129804 gnu: psm: Only use as an input on supported-systems.
adds 31a963f gnu: notmuch: Update to 0.25.2.
adds 4a30c1c gnu: vim: Update to 8.0.1274 [fixes CVE-2017-1000382].
adds 38ad27d gnu: mercurial: Update to 4.4.1.
adds 2b295f5 gnu: Add python-pydot.
adds 75d342f gnu: Add python-networkx2.
adds a67f094 gnu: Add websockify.
adds 625492e gnu: gcc-4.7: Resurrect building with gcc-5.4.0.
adds d469bc0 gnu: feh: Update to 2.22.2.
adds cd21587 gnu: bdftopcf: Update to 1.1.
adds 902fb15 gnu: Add r-genomicfiles.
adds 3af149f gnu: Add r-complexheatmap.
adds 04e2a2e gnu: Add r-dirichletmultinomial.
adds 763e981 gnu: Add r-annotationfilter.
adds aa30ab5 gnu: Add r-ensembldb.
adds 2f6f61f gnu: Add r-organismdbi.
adds 7af1f40 gnu: Add r-biovizbase.
adds 60faf94 gnu: Add r-ggbio.
adds 96a392a gnu: Add r-gprofiler.
adds e2b9279 gnu: Add r-gqtlbase.
adds dd5fc8b gnu: Add r-snpstats.
adds b52a866 gnu: Add r-org-hs-eg-db.
adds 421c68e gnu: Add r-homo-sapiens.
adds 15f98b0 gnu: Add r-erma.
adds 66c3910 gnu: Add r-ldblock.
adds 10e16fa gnu: Add r-mice.
adds 7fd5f60 gnu: Add r-hardyweinberg.
adds 794ff34 gnu: Add r-gqtlstats.
adds 4272000 gnu: Add r-gviz.
adds 2e4ce60 gnu: Add r-gwascat.
adds 3a22732 gnu: Add r-sm.
adds 9232cac gnu: Add r-vioplot.
adds fbf5440 gnu: Add r-sushi.
adds 30eb4e3 gnu: Add r-fithic.
adds c49102e gnu: Add r-hitc.
adds 7b0569c gnu: Add r-rsofia.
adds 738dda8 gnu: Add r-bbmle.
adds 14e5f6b gnu: r-fdrtool: Update description.
adds 2e648d2 gnu: r-prabclus: Update description.
adds 12a24ee gnu: Add glusterfs.
adds dd00e09 gnu: time: Update to 1.8.
adds c8b38f8 gnu: time: Update license.
adds 88fb156 gnu: pcb: Update to 4.0.2.
adds 5a80c15 gnu: Remove "open source" from descriptions.
adds 3699383 gnu: Add r-xts.
adds b72b42c gnu: Add r-performanceanalytics.
adds 7e3aca2 gnu: librecad: Fix build.
adds 697e341 gnu: fastcap: Use texlive-tiny.
adds 308c08d doc: Move paragraph about signature verification to the
top.
adds 018cf27 gnu: Add r-laeken.
adds e5c17b8 gnu: Add r-vcd.
adds 34260a1 gnu: miso: Use pypi-uri.
adds c828969 build: Use overlayfs instead of unionfs.
adds d9565f7 install: Use overlayfs instead of unionfs.
adds 0af94ad gnu: service: Update comment.
adds 37eed37 ui: Introduce (guix i18n).
adds 2373513 ui: Define and honor '&error-location' and '&fix-hint'
conditions.
adds a3d37f3 services: 'fold-service-types' honors its seed.
adds 3943913 services: 'fold-service-types' includes (gnu services).
adds 49483f7 services: Add 'lookup-service-types'.
adds c5a4a92 gnu: Improve error reporting of the use-.*modules macros.
adds f44169c gnu: Add go-github-com-tjfoc-gmsm-sm4.
adds 4cf6827 gnu: go-github-com-audriusbutkevicius-kcp-go: Update to
0.0.0-1.8ae5f52.
adds 52ff28e gnu: Add go-github-com-zillode-notify.
adds 03b154f gnu: syncthing: Update to 0.14.40.
adds 7df4194 gnu: python-icalendar: Update to 4.0.0.
adds a3dd13a gnu: rpm: Update to 4.13.0.2 [fixes CVE-2017-{7500,7501}].
adds ea1f073 gnu: slurm: Update to 16.05.11 [fixes CVE-2017-15566].
adds 8f220b7 gnu: tremc: Update to 0.9.0-1.9755b50.
adds e5f748a gnu: totem: Enable parallel build.
adds da4a707 gnu: roary: Update to 3.11.0.
adds 5475749 system: Do not set 'TZ'.
adds ad9b898 gnu: libwnck: Update to 3.24.1.
adds 3694a9b gnu: chromaprint: Update to 1.4.2.
adds cfbe7b7 gnu: linux: Add linux-libre arm kernel.
adds d8f075c gnu: %intel-compatible-systems: Re-add variable.
adds 935542f ui: Add 'display-hint'.
adds a2985bb ui: Provide hints for unbound-variable errors.
adds dc85622 ui: Add an 'unbound-variable' exception printer.
adds f021382 gnu: Add nxbelld.
adds d315073 gnu: emacs-ahungry-theme: Update to 1.8.0.
adds e99f045 gnu: Add r-directlabels.
adds b70d72a tests: Adjust to unbound-variable exception printer.
adds 1d8e73b gnu: postgresql: Update to 10.1 [security fixes].
adds 3c3d20c gnu: libpsl: Update to 0.19.1.
adds f8071be gnu: address@hidden: Update to 4.1.46.
adds 3a79bd0 gnu: address@hidden: Update to 4.4.97.
adds 4cacbf3 gnu: address@hidden: Update to 4.9.61.
adds 74bea6a gnu: linux-libre: Update to 4.13.12.
adds 179b7ac gnu: address@hidden: Update to 9.6.6 [security fixes].
adds 195f0d0 git: Work around wrong default argument of 'clone'.
adds 011f576 gnu: Add Epson escpr printer driver.
adds 177475c gnu: password-store: Install passmenu script.
adds ae451b9 gnu: synergy: Fix minor problems with the package
definitions.
adds 0af4df7 gnu: cutadapt: Update to 1.14.
adds d4d7d70 gnu: Fix hunspell-dict-en-* dictionary installation.
adds adf7e69 gnu: qemu: Fix CVE-2017-{15038,15268,15289}.
adds 74c0aeb gnu: webkitgtk: Update to 2.18.3 [fixes
CVE-2017-{13788,13798,13803}].
adds 59da6f0 download: Work around bogus HTTP handling in Guile 2.2 <=
2.2.2.
adds 7c08715 gnu: vsearch: Update to 2.6.0.
adds 11ed410 gnu: methylkit: Use new home page.
adds 9629c6b gnu: cyrus-sasl: Use new home page.
adds 795ec76 install: Fix typo.
adds 8d688cd gnu: python-sqlparse: Update to 0.2.4.
adds e077e7d gnu: python-sqlparse: Fix syntax error.
adds e65acb3 gnu: python-sympy: Update to 1.1.1.
adds ce1ac8e gnu: python2-rpython: Update to 0.2.1.
adds 074ff55 gnu: libreoffice: Update to 5.3.7.2 and enable GTK3.
adds 7a9283a gnu: libetonyek: Update to 0.1.7.
adds 45d5c80 gnu: libvisio: Update to 0.1.6.
adds ec03062 gnu: libstaroffice: Update to 0.0.5.
adds 56f35d9 gnu: lvm2: Update to 2.02.176.
adds 65a19ab download: Work around more bogus HTTP handling in Guile
2.2 <= 2.2.2.
adds 4ad3a3f tests: Refer to "address@hidden".
adds ae0307f tests: Adjust to new unbound-variable error message.
adds 4564782 gnu: nvi: Build with support for Unicode text.
adds b1488c7 git: Check whether 'clone-init-options' is defined.
adds 327df26 gnu: nyacc: Update to 0.82.4.
adds cda2e2c gnu: emacs-emms: Update to 4.4.
adds f9035ef gnu: mailutils: Update to 3.4.
adds 6862e4b gnu: perl-mime-types: Update to 2.14.
adds 9c2917f gnu: lynx: Use new home page.
adds d1b5043 gnu: fcgi: Use archived home page fork.
adds 5ade9bc gnu: fcgi: Fix typo in description.
adds 07cc924 gnu: libusb-compat: Use the same home page as libusb.
adds 882d921 gnu: mupdf: Actually fix CVE-2017-15587.
adds b7ca42a gnu: w3m: Find an editor in the environment.
adds 7e0d513 gnu: mupdf: Use Texinfo for the description.
adds 1e2a36e gnu: ffmpeg: Reduce the size of the closure.
adds c7b433d gnu: glib-networking: Update to 2.54.1.
adds 44df780 gnu: lash: Don't build lashd.
adds b07bfd0 gnu: lash: Don't build static libraries.
adds 31f248f gnu: pdf.scm: Arrange modules alphabetically.
adds 76379dc gnu: mupdf: Use https.
adds 89ba894 gnu: Add mujs.
adds 1650cf9 gnu: mupdf: Unbundle mujs.
adds 8420c7a gnu: linux-libre: Change URL to HTTPS.
adds 2560aa7 gnu: Remove unrar.
adds 6a98b9f doc: Better explain GC roots.
adds b8f59cd list-runtime-roots: Do not use 'lsof'.
adds fb17a89 list-runtime-roots: Canonicalize store items.
adds c0d1fa6 gnu: imagemagick: Update to 6.9.9-23.
adds ecc5857 download: Try FTP servers last.
adds d0b8777 download: Use HTTPS for the first ImageMagick mirror.
adds 856b68b list-runtime-roots: Ignore PIDs we cannot access.
adds f35bb07 gnu: libsoup: Update to 2.60.2.
adds ce12b31 gnu: ibus: Enable wayland support.
adds 6b7490b gnu: ibus: Update to 1.5.17.
adds ff23b47 tests: 'guix-gc.sh' passes even when 'out' or 'drv' are
defined as env vars.
adds b918473 gnu: guix: Update snapshot.
adds a0fea77 services: guix: Remove dependency on 'lsof'.
adds 62f0806 Revert "gnu: totem: Enable parallel build."
adds d4735e8 gnu: cd-hit: Update source tarball hash.
adds a06b9b5 gnu: Move testing packages from haskell to haskell-check.
adds 44b7374 gnu: Move web packages from haskell to haskell-web.
adds f24eba8 gnu: Move crypto packages from haskell to haskell-crypto.
adds 587d175 gnu: ghc-tls: Move to (gnu packages tls).
adds 5ccde20 gnu: Move test packages from perl to perl-check.
adds a68e586 gnu: diamond: Update to 0.9.13.
adds 1b2f753 gnu: Move web packages from python to python-web.
adds 58b8d1b gnu: iproute2: Update to 4.14.0.
adds 85a9ffc gnu: exim: Use HTTPS for home page.
adds a5a22d7 gnu: gnome-system-monitor: Update to 3.26.0.
adds 31d9e45 gnu: gnome-calculator: Update to 3.26.0.
adds 52b617f gnu: Update awscli to 1.11.185.
adds 412716e grafts: Clarify the status of the workaround for
<http://bugs.gnu.org/24659>.
adds 5724a14 tests: install: Increase target-size.
adds 9f86059 download: Pass the timeout to 'ftp-retr'.
adds 1697307 gnu: Add guile-wiredtiger.
adds 8c2dced gnu: devhelp: Update to 3.26.0.
adds bd2eedd gnu: smartmontools: Update to 6.6.
adds c115b2d gnu: smartmontools: Mark up description.
adds 06d2a63 gnu: aria2: Update to 1.33.1.
adds dba7028 gnu: geoclue: Update to 2.4.7.
adds 99adfd7 gnu: geoclue: Use HTTPS for home page.
adds c27f485 gnu: youtube-dl: Update to 2017.11.15.
adds 471ce31 gnu: gnucash: Update to 2.6.18.
adds 7c1adf0 gnu: gnucash: Use HTTPS for www.gnucash.org.
adds ed0f9f5 gnu: iproute2: Update to 4.14.1.
adds 6a71fa6 gnu: icecat: Label patches to reflect CVE assignments.
adds f1e3214 gnu: icecat: Add more fixes from upstream mozilla-esr52.
adds 6f0e2c2 gnu: address@hidden: Update to 4.4.98.
adds 811a24c gnu: address@hidden: Update to 4.9.62.
adds c114c9c gnu: linux-libre: Update to 4.14.
adds 866f37f download: Improve efficiency of 'write-request' over TLS.
adds 7482b98 cve: Use 'http-fetch/cached' instead of having custom
caching.
adds cc6f491 gnu: Move crypto packages from python to python-crypto.
adds b95c17c gnu: Move Python packages from crypto to python-crypto.
adds 589e3f4 gnu: Move more packages from python to python-web.
adds 304a53f ui: Add source file name to the package search metrics.
adds 0d549f6 gnu: messaging: Add libsignal-protocol-c.
adds d9cd1c2 gnu: messaging: Enable OMEMO for dino.
adds 42e5260 gnu: xpra: Fix paths.
adds 15712cc gnu: spectrwm: Update to 3.1.0.
adds afc4382 gnu: wget: Add wget2.
adds 0b4dbb4 gnu: syslinux: Add explicit dependency on mtools.
adds ef2c6b4 gnu: Add qucs-s.
adds 232b3d3 workers: 'pool-idle?' returns true only if the workers
are idle.
adds 19fd722 workers: Add test with exceptions.
adds d5ce7bc workers: Display backtrace in pre-unwind handler.
adds 284d7da gnu: libnftnl: Update to 1.0.8.
adds 64a4d39 gnu: nftables: Update to 0.8.
adds cf8ec42 gnu: gnome-disk-utility: Update to 3.26.2.
adds 9bc646d gnu: eog: Update to 3.26.2.
adds 669be6a gnu: cool-retro-term: Fix qml path.
adds 3fe4c9d gnu: Add emacs-transmission.
adds fc8d695 gnu: cheese: Update to 3.26.0.
adds ff49437 gnu: Add qmidiroute.
adds ac257f1 gnu: Move testing packages from python.scm to check.scm.
adds 98c6a02 gnu: Move more web packages from python.scm to
python-web.scm.
adds be6eb2f gnu: python-scikit-learn: Move from python.scm to
machine-learning.scm.
adds a8714bf gnu: Move database packages from python.scm to
databases.scm.
adds 45eee2d doc: Write "file system" instead of "partition" as
appopriate.
adds d72f76d gnu: eolie: Update to 0.9.12.
adds 8710d4d gnu: java-swt: Update to 4.7.1a.
adds 40f372a gnu: tuxguitar: Build with icedtea-8.
adds 2581188 gnu: vim: Update to 8.0.1300.
adds d8e2571 build-system/go: Don't let Go executables refer to the Go
compiler.
adds b3b07df gnu: dino: Update to 0.0-2-2a514d096.
adds f10120d gnu: linux-libre: Remove Nouveau from arm configuration.
adds b9f2370 gnu: linux-libre: Remove Tegra DRM from arm configuration.
adds ccedfd3 gnu: r-org-hs-eg-db: Remove duplicate package definition.
adds d595fed gnu: r-org-hs-eg-db: Update to 3.5.0.
adds 676507e gnu: r-org-hs-eg-db: Clarify description.
adds 4982d0a gnu: Remove duplicates from (gnu packages java).
adds c151b0b gnu: Remove duplicate from (gnu packages cran).
adds 90dbd98 gnu: Remove duplicate from (gnu packages bioinformatics).
adds 9c2d0a0 gnu: Remove duplicate from (gnu packages gnupg).
adds 9ef9c64 gnu: Remove duplicates from (gnu packages statistics).
adds 57dc9b5 gnu: r-genomationdata: Update to 1.10.0.
adds f3569f5 gnu: r-org-mm-eg-db: Update to 3.5.0.
adds 19fc299 gnu: r-org-dm-eg-db: Update to 3.5.0.
adds e466429 gnu: r-org-ce-eg-db: Update to 3.5.0.
adds 592f4a9 gnu: r-go-db: Update to 3.5.0.
adds 261b38a gnu: r-genomeinfodbdata: Update to 0.99.1.
adds c5a8ecb gnu: Remove duplicates from (gnu packages tex).
adds 82af2c2 build-system: texlive: Only make a union of directories.
adds 9869bb1 gnu: Add bitshuffle.
adds cea8346 gnu: Add java-snappy.
adds 823997e gnu: Add java-iq80-snappy.
adds 965ba54 licenses: Add cddl1.1.
adds 5fb3e82 gnu: Add java-jboss-jms-api-spec.
adds 3ff47c6 gnu: Add java-mail.
adds 217b20e gnu: Add java-jeromq.
adds 51263ff gnu: Add java-commons-csv.
adds 229a986 gnu: Add java-commons-collections.
adds 5aa2f3f gnu: Add java-commons-beanutils.
adds 46c6905 gnu: Add java-kafka-clients.
adds dfef423 gnu: Add java-log4j-core.
adds 2caf873 gnu: Add java-log4j-1.2-api.
adds 0b54e19 gnu: Add java-jdom.
adds 78745d3 gnu: Add java-geronimo-xbean-reflect.
adds b80027e gnu: Add java-tukaani-xz.
adds 0726d4e gnu: Add java-plexus-container-default-bootstrap.
adds 0858b9d gnu: Add java-plexus-io.
adds b51df3c gnu: Add java-plexus-archiver.
adds a083729 gnu: Add java-plexus-container-default.
adds 762b5a8 gnu: Move more testing packages from python.scm to
check.scm.
adds 33dc54b gnu: Move date/time packages from python.scm to time.scm.
adds 653f2b9 gnu: python-pylast: Update to 2.0.0.
adds b8e2af9 gnu: bitshuffle: Let build phase return #t.
adds 04e9113 gnu: bitshuffle-for-snappy: Simplify.
adds 218d1dd gnu: java-mail: Let build phase return boolean.
adds 3182a1d gnu: audacity: Update to 2.2.0.
adds 05c80e6 gnu: mes: Update to 0.11.
adds a7963b4 gnu: libassuan: Update to 2.4.4.
adds 42ca84b gnu: libreoffice: Remove GTK+ 2.
adds 6563d58 gnu: owncloud-client: Don't check for updates.
adds 5af27a8 gnu: owncloud-client: Update to 2.3.4.
adds 84bd924 gnu: nano: Update to 2.9.0.
adds f4dd303 gnu: Patch ikiwiki to set PERL5LIB in the CGI wrapper.
adds c146314 Update email address for ng0.
adds a0e52af gnu: tevent: Update to 0.9.34.
adds baba4d6 gnu: samba: Update to 4.7.2.
adds 53bbafd gnu: strace: Update to 4.20.
adds 0632c6a gnu: bitcoin: Update to 0.15.1.
adds a93447b gnu: nss, nss-certs: Update to 3.34.
new 2dd1292 Merge branch 'master' into core-updates
The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
Makefile.am | 8 +-
build-aux/hydra/gnu-system.scm | 34 +-
doc/contributing.texi | 12 +-
doc/guix.texi | 241 +-
gnu.scm | 100 +-
gnu/build/linux-boot.scm | 43 +-
gnu/local.mk | 23 +-
gnu/packages.scm | 10 +-
gnu/packages/accessibility.scm | 2 +-
gnu/packages/admin.scm | 17 +-
gnu/packages/aidc.scm | 7 +-
gnu/packages/android.scm | 1 +
gnu/packages/aspell.scm | 2 +
gnu/packages/audio.scm | 100 +-
gnu/packages/autotools.scm | 2 +-
.../{4.13-x86_64.conf => 4.14-arm.conf} | 7397 +++++++++-----------
.../linux-libre/{4.13-i686.conf => 4.14-i686.conf} | 324 +-
.../{4.13-x86_64.conf => 4.14-x86_64.conf} | 330 +-
gnu/packages/backup.scm | 8 +-
gnu/packages/benchmark.scm | 4 +-
gnu/packages/bioinformatics.scm | 1136 ++-
gnu/packages/bittorrent.scm | 15 +-
gnu/packages/bootloaders.scm | 29 +-
gnu/packages/calendar.scm | 2 +
gnu/packages/certs.scm | 4 +-
gnu/packages/check.scm | 1437 +++-
gnu/packages/compression.scm | 260 +-
gnu/packages/cran.scm | 325 +-
gnu/packages/crypto.scm | 101 +-
gnu/packages/cups.scm | 36 +
gnu/packages/cyrus-sasl.scm | 2 +-
gnu/packages/databases.scm | 661 +-
gnu/packages/dav.scm | 4 +-
gnu/packages/django.scm | 7 +-
gnu/packages/docker.scm | 3 +-
gnu/packages/ebook.scm | 14 +-
gnu/packages/emacs.scm | 82 +-
gnu/packages/engineering.scm | 314 +-
gnu/packages/enlightenment.scm | 2 +-
gnu/packages/file-systems.scm | 118 +
gnu/packages/finance.scm | 34 +-
gnu/packages/firmware.scm | 6 +-
gnu/packages/fontutils.scm | 4 +-
gnu/packages/freedesktop.scm | 6 +-
gnu/packages/game-development.scm | 10 +-
gnu/packages/games.scm | 2 +
gnu/packages/gcc.scm | 1 +
gnu/packages/glib.scm | 9 +-
gnu/packages/gnome.scm | 154 +-
gnu/packages/gnucash.scm | 13 +-
gnu/packages/gnupg.scm | 127 +-
gnu/packages/gnuzilla.scm | 63 +-
gnu/packages/graph.scm | 4 +-
gnu/packages/graphviz.scm | 28 +
gnu/packages/guile.scm | 6 +-
gnu/packages/haskell-check.scm | 728 ++
gnu/packages/haskell-crypto.scm | 530 ++
gnu/packages/haskell-web.scm | 845 +++
gnu/packages/haskell.scm | 2183 +-----
gnu/packages/ibus.scm | 9 +-
gnu/packages/idris.scm | 2 +
gnu/packages/image-viewers.scm | 13 +-
gnu/packages/image.scm | 1 +
gnu/packages/imagemagick.scm | 4 +-
gnu/packages/irc.scm | 7 +-
gnu/packages/iso-codes.scm | 4 +-
gnu/packages/java.scm | 766 +-
gnu/packages/javascript.scm | 34 +
gnu/packages/jrnl.scm | 5 +-
gnu/packages/kde-frameworks.scm | 534 +-
gnu/packages/kde.scm | 6 +-
gnu/packages/kodi.scm | 60 +
gnu/packages/language.scm | 1 +
gnu/packages/ldc.scm | 1 +
gnu/packages/libffi.scm | 1 +
gnu/packages/libreoffice.scm | 48 +-
gnu/packages/libupnp.scm | 8 +-
gnu/packages/libusb.scm | 2 +-
gnu/packages/linux.scm | 105 +-
gnu/packages/logging.scm | 1 +
gnu/packages/machine-learning.scm | 56 +-
gnu/packages/mail.scm | 13 +-
gnu/packages/markup.scm | 2 +-
gnu/packages/maths.scm | 11 +-
gnu/packages/mc.scm | 2 +-
gnu/packages/medical.scm | 1 +
gnu/packages/mes.scm | 10 +-
gnu/packages/messaging.scm | 58 +-
gnu/packages/mingw.scm | 6 +-
gnu/packages/mp3.scm | 5 +-
gnu/packages/mpd.scm | 1 +
gnu/packages/mpi.scm | 8 +-
gnu/packages/music.scm | 43 +-
gnu/packages/nano.scm | 4 +-
gnu/packages/networking.scm | 1 +
gnu/packages/nutrition.scm | 1 +
gnu/packages/nvi.scm | 3 +-
gnu/packages/ocaml.scm | 2 +-
gnu/packages/openstack.scm | 44 +-
gnu/packages/package-management.scm | 34 +-
gnu/packages/parallel.scm | 9 +-
gnu/packages/password-utils.scm | 22 +-
.../audacity-build-with-system-portaudio.patch | 64 +
...inline.patch => gcc-4-compile-with-gcc-5.patch} | 6 +-
gnu/packages/patches/icecat-bug-1348660-pt5.patch | 727 ++
gnu/packages/patches/icecat-bug-1415133.patch | 40 +
...ktexteditor-5.39.0-autotests-dependencies.patch | 49 +
.../patches/libetonyek-build-with-mdds-1.2.patch | 74 -
gnu/packages/patches/libvisio-fix-tests.patch | 35 -
gnu/packages/patches/mupdf-CVE-2017-15587.patch | 10 +-
gnu/packages/patches/netsurf-system-utf8proc.patch | 51 +-
.../patches/owncloud-disable-updatecheck.patch | 49 +
gnu/packages/patches/psm-arch.patch | 13 +
gnu/packages/patches/psm-ldflags.patch | 13 +
gnu/packages/patches/psm-repro.patch | 14 +
.../python-networkx2-reproducible-build.patch | 29 +
gnu/packages/patches/qemu-CVE-2017-15038.patch | 51 +
gnu/packages/patches/qemu-CVE-2017-15268.patch | 62 +
gnu/packages/patches/qemu-CVE-2017-15289.patch | 66 +
gnu/packages/pdf.scm | 58 +-
gnu/packages/perl-check.scm | 1169 ++++
gnu/packages/perl.scm | 1141 +--
gnu/packages/python-crypto.scm | 637 ++
gnu/packages/python-web.scm | 2444 +++++++
gnu/packages/python.scm | 5666 +--------------
gnu/packages/qt.scm | 2 +-
gnu/packages/rdf.scm | 3 +
gnu/packages/regex.scm | 4 +-
gnu/packages/rust.scm | 2 +-
gnu/packages/samba.scm | 12 +-
gnu/packages/sdl.scm | 18 +-
gnu/packages/sssd.scm | 4 +
gnu/packages/statistics.scm | 198 +-
gnu/packages/storage.scm | 1 +
gnu/packages/suckless.scm | 2 +-
gnu/packages/sync.scm | 6 +-
gnu/packages/syncthing.scm | 66 +-
gnu/packages/synergy.scm | 28 +-
gnu/packages/tcl.scm | 2 +-
gnu/packages/terminals.scm | 6 +-
gnu/packages/tex.scm | 81 +-
gnu/packages/time.scm | 280 +-
gnu/packages/tls.scm | 51 +
gnu/packages/tor.scm | 2 +
gnu/packages/tryton.scm | 4 +
gnu/packages/version-control.scm | 10 +-
gnu/packages/video.scm | 18 +-
gnu/packages/vim.scm | 6 +-
gnu/packages/virtualization.scm | 6 +-
gnu/packages/vpn.scm | 1 +
gnu/packages/w3m.scm | 6 +-
gnu/packages/web-browsers.scm | 3 +-
gnu/packages/web.scm | 104 +-
gnu/packages/webkit.scm | 4 +-
gnu/packages/wget.scm | 61 +
gnu/packages/wm.scm | 13 +-
gnu/packages/xdisorg.scm | 38 +
gnu/packages/xml.scm | 1 +
gnu/packages/xorg.scm | 33 +-
gnu/services.scm | 20 +-
gnu/services/admin.scm | 6 +
gnu/services/audio.scm | 1 +
gnu/services/avahi.scm | 7 +-
gnu/services/base.scm | 12 +-
gnu/services/ssh.scm | 7 +
gnu/services/telephony.scm | 305 +
gnu/services/xorg.scm | 9 +-
gnu/system.scm | 5 +-
gnu/system/install.scm | 47 +-
gnu/system/linux-initrd.scm | 5 +-
gnu/system/vm.scm | 8 +-
gnu/tests/install.scm | 4 +-
guix/build-system/go.scm | 2 +
guix/build-system/r.scm | 9 +-
guix/build/compile.scm | 28 +-
guix/build/download.scm | 61 +-
guix/build/go-build-system.scm | 60 +-
guix/build/graft.scm | 1 +
guix/build/pull.scm | 61 +-
guix/build/texlive-build-system.scm | 2 +-
guix/cve.scm | 94 +-
guix/download.scm | 40 +-
guix/ftp-client.scm | 11 +-
guix/git.scm | 10 +-
guix/http-client.scm | 13 +-
guix/i18n.scm | 51 +
guix/import/cran.scm | 91 +-
guix/import/utils.scm | 28 +-
guix/licenses.scm | 10 +-
guix/records.scm | 18 +-
guix/scripts/refresh.scm | 3 +-
guix/ui.scm | 120 +-
guix/utils.scm | 17 +
guix/workers.scm | 28 +-
nix/scripts/list-runtime-roots.in | 94 +-
po/guix/POTFILES.in | 1 +
tests/guix-build.sh | 2 +-
tests/guix-gc.sh | 10 +-
tests/guix-package.sh | 2 +-
tests/guix-system.sh | 32 +-
tests/services.scm | 10 +-
tests/workers.scm | 26 +
202 files changed, 19664 insertions(+), 15169 deletions(-)
copy gnu/packages/aux-files/linux-libre/{4.13-x86_64.conf => 4.14-arm.conf}
(54%)
rename gnu/packages/aux-files/linux-libre/{4.13-i686.conf => 4.14-i686.conf}
(98%)
rename gnu/packages/aux-files/linux-libre/{4.13-x86_64.conf =>
4.14-x86_64.conf} (98%)
create mode 100644 gnu/packages/haskell-check.scm
create mode 100644 gnu/packages/haskell-crypto.scm
create mode 100644 gnu/packages/haskell-web.scm
create mode 100644
gnu/packages/patches/audacity-build-with-system-portaudio.patch
copy gnu/packages/patches/{gcc-4.6-gnu-inline.patch =>
gcc-4-compile-with-gcc-5.patch} (93%)
create mode 100644 gnu/packages/patches/icecat-bug-1348660-pt5.patch
create mode 100644 gnu/packages/patches/icecat-bug-1415133.patch
create mode 100644
gnu/packages/patches/ktexteditor-5.39.0-autotests-dependencies.patch
delete mode 100644 gnu/packages/patches/libetonyek-build-with-mdds-1.2.patch
delete mode 100644 gnu/packages/patches/libvisio-fix-tests.patch
create mode 100644 gnu/packages/patches/owncloud-disable-updatecheck.patch
create mode 100644 gnu/packages/patches/psm-arch.patch
create mode 100644 gnu/packages/patches/psm-ldflags.patch
create mode 100644 gnu/packages/patches/psm-repro.patch
create mode 100644
gnu/packages/patches/python-networkx2-reproducible-build.patch
create mode 100644 gnu/packages/patches/qemu-CVE-2017-15038.patch
create mode 100644 gnu/packages/patches/qemu-CVE-2017-15268.patch
create mode 100644 gnu/packages/patches/qemu-CVE-2017-15289.patch
create mode 100644 gnu/packages/perl-check.scm
create mode 100644 gnu/packages/python-crypto.scm
create mode 100644 gnu/packages/python-web.scm
create mode 100644 gnu/services/telephony.scm
create mode 100644 guix/i18n.scm
- branch core-updates updated (259b4f3 -> 2dd1292),
Marius Bakke <=