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32/77: gnu: r-seurat: Update to 2.2.0.
From: |
Ricardo Wurmus |
Subject: |
32/77: gnu: r-seurat: Update to 2.2.0. |
Date: |
Tue, 13 Feb 2018 10:19:41 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 26e3e28cc9a55d52415d1fa7733eaae34d4ba4e4
Author: Ricardo Wurmus <address@hidden>
Date: Tue Feb 13 16:00:56 2018 +0100
gnu: r-seurat: Update to 2.2.0.
* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.2.0.
[propagated-inputs]: Remove r-ggjoy; add r-rcppeigen and r-ggridges.
---
gnu/packages/bioinformatics.scm | 7 ++++---
1 file changed, 4 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index c0cc88f..1e2455d 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9394,13 +9394,13 @@ and irregular enzymatic cleavages, mass measurement
accuracy, etc.")
(define-public r-seurat
(package
(name "r-seurat")
- (version "2.1.0")
+ (version "2.2.0")
(source (origin
(method url-fetch)
(uri (cran-uri "Seurat" version))
(sha256
(base32
- "1hqaq6bciikrsyw157w8fn4jw885air7xbkxrmism93rp4qx483x"))
+ "1yarzhbylkfk4vwp7f8710zpdglkfww2db3hmq69hjllgg80ykmw"))
;; Delete pre-built jar.
(snippet
'(begin (delete-file "inst/java/ModularityOptimizer.jar")
@@ -9437,8 +9437,8 @@ Main-Class: ModularityOptimizer\n")))
("r-fnn" ,r-fnn)
("r-fpc" ,r-fpc)
("r-gdata" ,r-gdata)
- ("r-ggjoy" ,r-ggjoy)
("r-ggplot2" ,r-ggplot2)
+ ("r-ggridges" ,r-ggridges)
("r-gplots" ,r-gplots)
("r-gridextra" ,r-gridextra)
("r-hmisc" ,r-hmisc)
@@ -9455,6 +9455,7 @@ Main-Class: ModularityOptimizer\n")))
("r-ranger" ,r-ranger)
("r-rcolorbrewer" ,r-rcolorbrewer)
("r-rcpp" ,r-rcpp)
+ ("r-rcppeigen" ,r-rcppeigen)
("r-rcppprogress" ,r-rcppprogress)
("r-reshape2" ,r-reshape2)
("r-rocr" ,r-rocr)
- 26/77: gnu: r-genomicfeatures: Update to 1.30.3., (continued)
- 26/77: gnu: r-genomicfeatures: Update to 1.30.3., Ricardo Wurmus, 2018/02/13
- 07/77: gnu: Add r-uuid., Ricardo Wurmus, 2018/02/13
- 17/77: gnu: r-vegan: Update to 2.4-6., Ricardo Wurmus, 2018/02/13
- 18/77: gnu: r-bookdown: Update to 0.6., Ricardo Wurmus, 2018/02/13
- 19/77: gnu: r-edger: Update to 3.20.8., Ricardo Wurmus, 2018/02/13
- 20/77: gnu: r-variantannotation: Update to 1.24.5., Ricardo Wurmus, 2018/02/13
- 21/77: gnu: r-limma: Update to 3.34.8., Ricardo Wurmus, 2018/02/13
- 25/77: gnu: r-rtracklayer: Update to 1.38.3., Ricardo Wurmus, 2018/02/13
- 28/77: gnu: r-wgcna: Update to 1.62., Ricardo Wurmus, 2018/02/13
- 27/77: gnu: r-genomation: Update to 1.11.3., Ricardo Wurmus, 2018/02/13
- 32/77: gnu: r-seurat: Update to 2.2.0.,
Ricardo Wurmus <=
- 34/77: gnu: r-gage: Update to 2.28.2., Ricardo Wurmus, 2018/02/13
- 38/77: gnu: r-mgcv: Update to 1.8-23., Ricardo Wurmus, 2018/02/13
- 45/77: gnu: r-tibble: Update to 1.4.2., Ricardo Wurmus, 2018/02/13
- 46/77: gnu: r-dbplyr: Update to 1.2.0., Ricardo Wurmus, 2018/02/13
- 50/77: gnu: r-git2r: Update to 0.21.0., Ricardo Wurmus, 2018/02/13
- 30/77: gnu: r-methylkit: Update to 1.4.1., Ricardo Wurmus, 2018/02/13
- 23/77: gnu: r-biomart: Update to 2.34.2., Ricardo Wurmus, 2018/02/13
- 31/77: gnu: r-msnbase: Update to 2.4.2., Ricardo Wurmus, 2018/02/13
- 29/77: gnu: r-gkmsvm: Update to 0.79.0., Ricardo Wurmus, 2018/02/13
- 40/77: gnu: r-digest: Update to 0.6.15., Ricardo Wurmus, 2018/02/13