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branch core-updates updated (9038743 -> 539bf8f)
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From: |
Mark H. Weaver |
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Subject: |
branch core-updates updated (9038743 -> 539bf8f) |
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Date: |
Thu, 17 May 2018 01:03:24 -0400 (EDT) |
mhw pushed a change to branch core-updates
in repository guix.
from 9038743 gnu: gjs: Fix build.
adds b61cb24 telephony: add twinkle
adds ede121d guix: Separate the package name and version with "@", not
"-".
adds 27ba976 guix: Revert accidentally committed changes.
adds fdc9170 gnu: Add java-groovy-bootstrap.
adds b0192c8 gnu: Add groovy-bootstrap.
adds a3f253a gnu: Add groovy-tests-bootstrap.
adds 6f07785 gnu: Add groovy-test.
adds e0e4bae gnu: Add groovy-xml.
adds 19ff61f gnu: Add groovy-templates.
adds f14a197 gnu: Add groovy-groovydoc.
adds b869c5c gnu: Add groovy-ant.
adds 5b46d3f gnu: Add groovy-bsf.
adds b221e8e gnu: Add groovy-swing.
adds 136987c gnu: Add groovy-console.
adds a6494dc gnu: Add groovy-docgenerator.
adds dabce25 gnu: Add groovy-groovysh.
adds 0280865 gnu: Add groovy-jmx.
adds dae9335 gnu: Add groovy-json.
adds 3537fb6 gnu: Add groovy-jsr223.
adds 4ab3b0c gnu: Add groovy-nio.
adds 107ebf7 gnu: Add groovy-servlet.
adds 2af51fd gnu: Add groovy-sql.
adds dc51a0a gnu: Add groovy-testng.
adds 88da2d2 gnu: Add groovy-macro.
adds 22103f1 gnu: Add groovy.
adds f895a7a gnu: trim-galore: Update to 0.4.5.
adds 126c9e3 gnu: bismark: Update to 0.19.1.
adds 72aa295 gnu: Add address@hidden
adds 74c0ee6 gnu: Add android-make-stub.
adds 436515c build: Add the Android NDK build-system.
adds 116c69d gnu: liblog: Use android-ndk-build-system.
adds 11cb109 gnu: libbase: Use android-ndk-build-system.
adds f6e75b0 gnu: adb: Use android-ndk-build-system.
adds 3724d37 gnu: mkbootimg: Install "bootimg.h".
adds ad23a3f doc: Document 'android-ndk-build-system'.
adds b98d447 gnu: Patch Android system core at the origin.
adds 16c2be0 gnu: Add android-libziparchive.
adds 092f88a gnu: Add android-libsparse.
adds 7b592cf gnu: Add android-safe-iop.
adds cc39d59 gnu: Add android-bionic-uapi.
adds cbf83e0 gnu: libcutils: Install header files.
adds c87ca40 gnu: Add android-libselinux.
adds 2d804f9 gnu: Add android-ext4-utils.
adds 055e6fb gnu: Add android-f2fs-utils.
adds be906ad gnu: Add android-libutils.
adds 8bbf99a gnu: android-make-stub: Update to 0.4.
adds 81abe37 gnu: liblog: Build library correctly.
adds 6283431 gnu: Add opencv.
adds afc2bf5 gnu: rust: Do not refer to 'gcc' from the top level.
adds 455b8fe gnu: Add fastboot.
adds 8272e5e gnu: Rename "liblog" to "android-liblog".
adds 01a2389 gnu: Rename "libbase" to "android-libbase".
adds 3385db3 gnu: Rename "libcutils" to "android-libcutils".
adds 9ed36cd build-system: android-ndk: Support unit tests.
adds 0e1011b gnu: android-make-stub: Update to 0.5.
adds 1a0dd01 gnu: adb: Add missing "#include"s.
adds aa820a1 gnu: android-make-stub: Update to 0.5.1.
adds 26dcbb8 gnu: android-make-stub: Update to 0.5.2.
adds 3766aa9 build-system: android-ndk: Let upstream install header
files.
adds 0d69720 gnu: android-selinux: Simplify.
adds 5c45730 gnu: android-liblog: Don't disable tests.
adds c774d8e gnu: android-libbase: Document test failure.
adds 23e70a6 gnu: android-libsparse: Don't disable tests.
adds 52bdbaf gnu: android-make-stub: Update to 0.5.3.
adds e55e6d3 gnu: android-libziparchive: Enable tests.
adds d3324a4 gnu: android-ext4-utils: Don't disable tests.
adds 9e8f0ff gnu: android-f2fs-utils: Don't disable tests.
adds c6ee92c gnu: Add android-googletest.
adds 7715269 gnu: android-make-stub: Update to 0.5.4.
adds cad7c59 gnu: android-make-stub: Update to 0.5.5.
adds cc59bf7 gnu: android-libutils: Add android-liblog.
adds fff9243 gnu: fastboot: Simplify package.
adds b913d1e gnu: fastboot: Enable tests.
adds 362f3bf gnu: adb: Document test failure.
adds 81dec59 gnu: twinkle: Fix support for codec speex
adds f546fcb gnu: fastboot: Remove (duplicate) googletest.
adds 8297f01 gnu: fastboot: Simplify package.
adds d412dbe gnu: Update to 2.3.3.
adds 51eb4a6 gnu: android-f2fs-utils: Update synopsis and description.
adds a73489e gnu: android-f2fs-utils: Install mkf2fsuserimg.sh.
adds 8584965 gnu: gajim: Fix GtkFileChooserDialog.
adds dac1c97 union: Add 'relative-file-name'.
adds e00ade3 profiles: Optionally use relative file names for symlink
targets.
adds 3636b1c profiles: Allow lowerable objects other than packages in
<manifest-entry>.
adds 54fd5ad search-paths: Add 'set-search-paths'.
adds 47a6032 pack: Add '--relocatable'.
adds b87fc9a gnu: android-make-stub: Update to 0.6.0.
adds 36d619e services: bitlbee: Add plugins.
adds 27cbe66 gnu: libressl: Update to 2.7.3.
adds 84960cb gnu: emacs-ewmctrl: Use git helpers.
adds 0bcb925 gnu: emacs-ewmctrl: Make sure wmctrl is in the right
place.
adds 11b43f9 gnu: Add js-filesaver.
adds 3cfd12f gnu: Add snap.
adds ef6a484 services: desktop: Add alsa-service-type.
adds 9c4ff53 gnu: python-attrs: Update to 17.4.0.
adds bbc8c36 gnu: Add python-async-generator.
adds 85ccc0c gnu: Add python-pycares.
adds 3cdab3d gnu: Add python-async-timeout.
adds 2528f3c gnu: Add python-idna-ssl.
adds cef6dc6 gnu: Add python-base58.
adds c158d47 gnu: Add python-pylibscrypt.
adds 25c591b gnu: Add python-multidict.
adds f90f4c9 gnu: Add python-aiodns.
adds 2eccb41 gnu: Add python-yarl.
adds 40c6e45 gnu: Add python-libnacl.
adds 321ba56 gnu: Add python-aiohttp.
adds cb91f6a gnu: Add python-duniterpy.
adds d2cebbf gnu: icecat: Relabel patches to reflect CVE assignments.
adds 93565b4 gnu: icecat: Add more fixes from upstream mozilla-esr52.
adds 9073561 gnu: Update emacs-org, emacs-org-contrib.
adds 07ca904 system: Add mx6cuboxi installer.
adds fd5536e system: Add wandboard installer.
adds 1b96078 system: Add u-boot-novena installer.
adds 10673d1 guix: Fix typo.
adds 30da317 pack: Relocatable wrapper now properly maps the current
UID/GID.
adds 26b8cad pack: 'guix pack -S xxx' no longer adds entries twice to
the tarball.
adds 4f38754 gnu: arpack-ng-openmpi: Fix build.
adds 1a4e553 gnu: eog-plugins: Update to 3.26.2.
adds cbcdb77 gnu: diffoscope: Update to 94.
adds 2c5289b gnu: diamond: Update to 0.9.22.
adds afca98f bootloader: extlinux: Fix menu support with u-boot.
adds 3944e13 gnu: address@hidden: Update to 4.9.99.
adds 7187669 gnu: address@hidden: Update to 4.14.40.
adds 0d0b572 gnu: linux-libre: Update to 4.16.8.
adds 3bdb248 gnu: u-boot: Update to 2018.05.
adds 53e290d gnu: u-boot: Add our dtc.
adds 30ef146 gnu: make-u-boot-package: Sort printed configurations.
adds ac30d18 gnu: make-u-boot-package: Print errors to
(current-error-port).
adds 35e427d gnu: u-boot-pine64-plus: Use bundled dtc.
adds 78ad8db gnu: u-boot-versatilepb: Remove package.
adds d6680dc hydra: Switch back to "-" instead of "@" in package job
names.
adds dd82ac1 gnu: xpra: Update to 2.3.
adds ecfc85d gnu: gnome-disk-utility: Update to 3.28.2.
adds 1df811f gnu: wine-staging-patchset-data: Update to 3.8.
adds efa465f gnu: wine-staging: Update to 3.8.
adds 8e6450f gnu: libreoffice: Update to 5.4.7.1.
adds 241caa6 gnu: MPD: Remove unecessary dependency on libmad.
adds 1d6dc2a gnu: gst-plugins-ugly: Remove libmad from the build
environment.
adds dd4fe0c gnu: Add u-boot-cubieboard.
adds 0fcfed3 gnu: make-u-boot-package: Install "u-boot".
adds 9dc0cf8 gnu: Go 1.9: Update to 1.9.6.
adds fb6357c gnu: Go 1.10: Update to 1.10.2.
adds e18e7cb gnu: hypre: Add missing dependency on Perl.
adds 437f62f utils: Add 'version-prefix?'.
adds 348987d packages: 'find-packages-by-name' properly honors version
prefixes.
adds d801cd0 gnu: Add Robocut.
adds e42c364 gnu: ImageMagick: Update to 6.9.9-43.
adds 307cdd6 gnu: viewnior: Update to 1.7.
adds aa8ac02 gnu: myrepos: Fix CVE-2018-7032.
adds fb8aff7 gnu: speedtest-cli: Update to 2.0.0.
adds 9e7b87d build: 'test-env' does not 'guix download' non-existent
files.
adds 68fdb38 gnu: robocut: Remove unnecessary dependency on qttools.
adds 44cea57 gnu: Add ghc-quickcheck-2.9.
adds e5d92c1 gnu: Add ghc-array.
adds 7d4e377 gnu: Add ghc-containers.
adds 563ab27 gnu: Add emacs-dts-mode.
adds 2b79c68 gnu: mupdf: Update to 1.13.0.
adds 34e00c7 gnu: guile-dbi: Fix RPATH and dependencies.
adds 20b51b1 gnu: Add pass-rotate.
adds f93c7a8 gnu: services: Fix wesnothd-configuration? symbol export.
adds 3203440 gnu: Add emacs-orgalist.
adds 5ac7bf5 doc: Update documentation of guix lint
adds 5834e4b gnu: opencv: Ignore CVEs.
adds 91e5885 pack: Link top-level entries of wrapped packages.
adds 30d722c gexp: Disable deprecation warnings for 'imported-modules'.
adds f858e58 gnu: Add guile-simple-zmq.
adds 183db72 gnu: Add r-bsgenome-dmelanogaster-ucsc-dm6.
adds cbd2e3d gnu: wesnoth: Update to 1.14.1.
adds 20f5c86 gnu: inkscape: Disable "icon-theme.cache" generation.
adds 5209f4d gnu: filezilla: Update to 0.12.2.
adds 4eeed44 gnu: python-statsmodels: Fix build.
adds 5f93600 gnu: nano: Update to 2.9.7.
adds 2fd345c doc: Improve 'guix size' documentation.
adds 63dbdf8 doc: Update 'guix size' example.
adds 40dc6df gnu: emacs-orgalist: Fix texinfo markup in description.
adds 6f84dc4 gnu: wine: Update to 3.0.1.
adds cbf58af gnu: dolphin-emu: Update to commit
47fd8c6eff4cdea7660d0fa78040f98d1d4fa136.
adds e7395b9 gnu: prosody: Update to 0.10.1 [security fixes].
adds 3659b0d gnu: maim: Update to 5.5.1.
adds ebbc0fe gnu: uim: Update to 1.8.8.
adds 8e0c5d4 gnu: dunst: Update to 1.3.2.
adds 9af5a51 gnu: perl-xml-compile-tester: Update to 0.91.
adds 4b4a4f5 gnu: perl-xml-compile-wsdl11: Update to 3.07.
adds 8c2ab74 gnu: i3status: Update to 2.12.
adds 1380455 gnu: lynx: Update to 2.8.9dev.18.
adds 5abd390 gnu: links: Update to 2.16.
adds 2112a99 gnu: youtube-dl: Update to 2018.05.09.
adds 14bec76 gnu: feh: Update to 2.26.2.
adds 1cffa65 gnu: graphicsmagick: Update to 1.3.29.
adds 75ea6fe gnu: phonon: Update to 4.10.1.
adds 7c52558 gnu: usbutils: Update to 010.
adds 1df4d1b gnu: python-graphviz: Update to 0.8.3.
adds 41c77ba gnu: rng-tools: Update to 6.2.
adds f3afef5 gnu: rng-tools: Use INVOKE.
adds 9a2ac95 gnu: r-desolve: Update to 1.21.
adds 0a0d6f4 gnu: libraw: Update to 0.18.11.
adds b85c185 gnu: libnftnl: Update to 1.1.0.
adds e17af38 gnu: libfm: Update to 1.3.0.2.
adds 34c2bc5 gnu: python-numexpr: Update to 2.6.5.
adds 3aa5b7d gnu: python-netifaces: Update to 0.10.7.
adds 2ef651a gnu: python-ddt: Update to 1.1.3.
adds 01635bc gnu: dash: Update to 0.5.10.1.
adds 4c32897 gnu: r-bit: Update to 1.1-13.
adds 610e56d gnu: r-stringr: Update to 1.3.1.
adds 500aba8 gnu: r-plotrix: Update to 3.7-1.
adds d059a01 gnu: r-rcppprogress: Update to 0.4.1.
adds 649b334 gnu: libdca: Update to 0.0.6.
adds 029dd51 gnu: address@hidden: Update to 4.4.132.
adds c0bd585 gnu: address@hidden: Update to 4.9.100.
adds 22d4667 gnu: address@hidden: Update to 4.14.41.
adds 2cf8531 gnu: linux-libre: Update to 4.16.9.
new 539bf8f Merge branch 'master' into core-updates
The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
Makefile.am | 5 +-
NEWS | 5 +
build-aux/hydra/gnu-system.scm | 3 +-
build-aux/test-env.in | 1 +
doc/guix.texi | 124 ++-
gnu/bootloader/extlinux.scm | 1 +
gnu/bootloader/u-boot.scm | 34 +-
gnu/local.mk | 16 +-
gnu/packages.scm | 2 +-
gnu/packages/android.scm | 613 ++++++++---
gnu/packages/aux-files/run-in-namespace.c | 313 ++++++
gnu/packages/bioconductor.scm | 32 +
gnu/packages/bioinformatics.scm | 82 +-
gnu/packages/bootloaders.scm | 41 +-
gnu/packages/commencement.scm | 2 +-
gnu/packages/dunst.scm | 5 +-
gnu/packages/education.scm | 73 +-
gnu/packages/emacs.scm | 85 +-
gnu/packages/emulators.scm | 12 +-
gnu/packages/ftp.scm | 4 +-
gnu/packages/games.scm | 5 +-
gnu/packages/gnome.scm | 8 +-
gnu/packages/gnuzilla.scm | 34 +-
gnu/packages/golang.scm | 8 +-
gnu/packages/graphviz.scm | 4 +-
gnu/packages/groovy.scm | 1156 ++++++++++++++++++++
gnu/packages/gstreamer.scm | 1 -
gnu/packages/guile.scm | 111 +-
gnu/packages/haskell-check.scm | 14 +
gnu/packages/haskell.scm | 55 +
gnu/packages/image-processing.scm | 205 ++++
gnu/packages/image-viewers.scm | 40 +-
gnu/packages/imagemagick.scm | 8 +-
gnu/packages/inkscape.scm | 9 +-
gnu/packages/javascript.scm | 39 +
gnu/packages/kde-frameworks.scm | 4 +-
gnu/packages/libreoffice.scm | 4 +-
gnu/packages/linux.scm | 64 +-
gnu/packages/lxde.scm | 4 +-
gnu/packages/maths.scm | 10 +-
gnu/packages/messaging.scm | 14 +-
gnu/packages/mpd.scm | 3 +-
gnu/packages/nano.scm | 4 +-
gnu/packages/networking.scm | 4 +-
gnu/packages/package-management.scm | 4 +-
gnu/packages/password-utils.scm | 33 +-
gnu/packages/patches/adb-add-libraries.patch | 30 +
.../groovy-add-exceptionutilsgenerator.patch | 98 ++
...> icecat-CVE-2018-5157-and-CVE-2018-5158.patch} | 0
gnu/packages/patches/libutils-add-includes.patch | 11 +
.../libutils-remove-damaging-includes.patch | 21 +
.../patches/libziparchive-add-includes.patch | 10 +
gnu/packages/patches/mupdf-CVE-2017-17858.patch | 111 --
gnu/packages/patches/mupdf-CVE-2018-1000051.patch | 88 --
gnu/packages/patches/mupdf-CVE-2018-6544.patch | 109 --
.../patches/mupdf-build-with-latest-openjpeg.patch | 27 -
gnu/packages/patches/myrepos-CVE-2018-7032.patch | 69 ++
.../patches/python-statsmodels-fix-tests.patch | 28 -
.../patches/wesnoth-fix-std-bad-cast.patch | 67 --
gnu/packages/pdf.scm | 10 +-
gnu/packages/photo.scm | 4 +-
gnu/packages/printers.scm | 69 ++
gnu/packages/python-crypto.scm | 124 +++
gnu/packages/python-web.scm | 109 ++
gnu/packages/python.scm | 102 +-
gnu/packages/rust.scm | 15 +-
gnu/packages/shells.scm | 4 +-
gnu/packages/statistics.scm | 46 +-
gnu/packages/telephony.scm | 69 ++
gnu/packages/tls.scm | 4 +-
gnu/packages/version-control.scm | 3 +-
gnu/packages/video.scm | 8 +-
gnu/packages/web-browsers.scm | 8 +-
gnu/packages/wine.scm | 10 +-
gnu/packages/wm.scm | 4 +-
gnu/packages/xdisorg.scm | 6 +-
gnu/packages/xml.scm | 8 +-
gnu/packages/xorg.scm | 10 +-
gnu/services/desktop.scm | 3 +
gnu/services/games.scm | 2 +-
gnu/services/messaging.scm | 13 +-
gnu/system/install.scm | 20 +-
guix/build-system/{dub.scm => android-ndk.scm} | 68 +-
guix/build/android-ndk-build-system.scm | 88 ++
guix/build/profiles.scm | 14 +-
guix/build/union.scm | 48 +-
guix/gexp.scm | 37 +-
guix/packages.scm | 13 +-
guix/profiles.scm | 19 +-
guix/scripts/lint.scm | 2 +-
guix/scripts/pack.scm | 218 +++-
guix/search-paths.scm | 15 +-
guix/utils.scm | 24 +-
tests/graph.scm | 2 +-
tests/guix-pack.sh | 10 +-
tests/profiles.scm | 57 +-
tests/union.scm | 18 +
tests/utils.scm | 8 +-
98 files changed, 4302 insertions(+), 957 deletions(-)
create mode 100644 gnu/packages/aux-files/run-in-namespace.c
create mode 100644 gnu/packages/groovy.scm
create mode 100644 gnu/packages/patches/adb-add-libraries.patch
create mode 100644
gnu/packages/patches/groovy-add-exceptionutilsgenerator.patch
rename gnu/packages/patches/{icecat-bug-1452075.patch =>
icecat-CVE-2018-5157-and-CVE-2018-5158.patch} (100%)
create mode 100644 gnu/packages/patches/libutils-add-includes.patch
create mode 100644 gnu/packages/patches/libutils-remove-damaging-includes.patch
create mode 100644 gnu/packages/patches/libziparchive-add-includes.patch
delete mode 100644 gnu/packages/patches/mupdf-CVE-2017-17858.patch
delete mode 100644 gnu/packages/patches/mupdf-CVE-2018-1000051.patch
delete mode 100644 gnu/packages/patches/mupdf-CVE-2018-6544.patch
delete mode 100644 gnu/packages/patches/mupdf-build-with-latest-openjpeg.patch
create mode 100644 gnu/packages/patches/myrepos-CVE-2018-7032.patch
delete mode 100644 gnu/packages/patches/python-statsmodels-fix-tests.patch
delete mode 100644 gnu/packages/patches/wesnoth-fix-std-bad-cast.patch
create mode 100644 gnu/packages/printers.scm
copy guix/build-system/{dub.scm => android-ndk.scm} (67%)
create mode 100644 guix/build/android-ndk-build-system.scm
- branch core-updates updated (9038743 -> 539bf8f),
Mark H. Weaver <=