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12/14: gnu: Add r-glmmtmb.
From: |
Ricardo Wurmus |
Subject: |
12/14: gnu: Add r-glmmtmb. |
Date: |
Wed, 24 Oct 2018 23:17:56 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 413944234cf736f6e180a3c075df7e8229727d8f
Author: Ricardo Wurmus <address@hidden>
Date: Thu Oct 25 05:16:54 2018 +0200
gnu: Add r-glmmtmb.
* gnu/packages/cran.scm (r-glmmtmb): New variable.
---
gnu/packages/cran.scm | 32 ++++++++++++++++++++++++++++++++
1 file changed, 32 insertions(+)
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 70cba10..4cd11bf 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -6529,3 +6529,35 @@ most functions lies on summary statistics or fit
measures for regression
models, including generalized linear models, mixed effects models and Bayesian
models.")
(license license:gpl3)))
+
+(define-public r-glmmtmb
+ (package
+ (name "r-glmmtmb")
+ (version "0.2.2.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "glmmTMB" version))
+ (sha256
+ (base32
+ "1clpkjlmsjmn3m1z5jqv8cgw6bvpqsy4nx6k947r0jya017ny5y5"))))
+ (properties `((upstream-name . "glmmTMB")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-lme4" ,r-lme4)
+ ("r-matrix" ,r-matrix)
+ ("r-nlme" ,r-nlme)
+ ("r-rcppeigen" ,r-rcppeigen)
+ ("r-tmb" ,r-tmb)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://github.com/glmmTMB")
+ (synopsis "Generalized linear mixed models")
+ (description
+ "Fit linear and generalized linear mixed models with various extensions,
+including zero-inflation. The models are fitted using maximum likelihood
+estimation via the Template Model Builder. Random effects are assumed to be
+Gaussian on the scale of the linear predictor and are integrated out using the
+Laplace approximation. Gradients are calculated using automatic
+differentiation.")
+ (license license:agpl3+)))
- 01/14: gnu: r-sjlabelled: Update to 1.0.14., (continued)
- 01/14: gnu: r-sjlabelled: Update to 1.0.14., Ricardo Wurmus, 2018/10/24
- 04/14: gnu: Add r-th-data., Ricardo Wurmus, 2018/10/24
- 03/14: gnu: Add r-sandwich., Ricardo Wurmus, 2018/10/24
- 07/14: gnu: Add r-pwr., Ricardo Wurmus, 2018/10/24
- 05/14: gnu: Add r-multcomp., Ricardo Wurmus, 2018/10/24
- 02/14: gnu: r-sjmisc: Update to 2.7.5., Ricardo Wurmus, 2018/10/24
- 08/14: gnu: Add r-coin., Ricardo Wurmus, 2018/10/24
- 09/14: gnu: Add r-bayesplot., Ricardo Wurmus, 2018/10/24
- 11/14: gnu: Add r-sjstats., Ricardo Wurmus, 2018/10/24
- 10/14: gnu: Add r-tmb., Ricardo Wurmus, 2018/10/24
- 12/14: gnu: Add r-glmmtmb.,
Ricardo Wurmus <=
- 13/14: gnu: Add r-ggeffects., Ricardo Wurmus, 2018/10/24
- 14/14: gnu: Add r-sjplot., Ricardo Wurmus, 2018/10/24
- 06/14: gnu: Add r-emmeans., Ricardo Wurmus, 2018/10/24