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01/01: guix: Update to Bioconductor 3.8.
From: |
Ricardo Wurmus |
Subject: |
01/01: guix: Update to Bioconductor 3.8. |
Date: |
Tue, 6 Nov 2018 12:22:25 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 9da4848632ea47bbd55ba1d8f8756d91961c44fe
Author: Ricardo Wurmus <address@hidden>
Date: Tue Nov 6 18:21:24 2018 +0100
guix: Update to Bioconductor 3.8.
* guix/import/cran.scm (%bioconductor-version): Update to 3.8.
* guix/build-system/r.scm (bioconductor-uri): Update archive URL.
---
guix/build-system/r.scm | 2 +-
guix/import/cran.scm | 4 ++--
2 files changed, 3 insertions(+), 3 deletions(-)
diff --git a/guix/build-system/r.scm b/guix/build-system/r.scm
index d5f8979..664515d 100644
--- a/guix/build-system/r.scm
+++ b/guix/build-system/r.scm
@@ -53,7 +53,7 @@ release corresponding to NAME and VERSION."
(list (string-append
"https://bioconductor.org/packages/release/bioc/src/contrib/"
name "_" version ".tar.gz")
;; TODO: use %bioconductor-version from (guix import cran)
- (string-append
"https://bioconductor.org/packages/3.7/bioc/src/contrib/Archive/"
+ (string-append
"https://bioconductor.org/packages/3.8/bioc/src/contrib/Archive/"
name "_" version ".tar.gz")))
(define %r-build-system-modules
diff --git a/guix/import/cran.scm b/guix/import/cran.scm
index 89c84f7..8f2c102 100644
--- a/guix/import/cran.scm
+++ b/guix/import/cran.scm
@@ -127,9 +127,9 @@ package definition."
(define %cran-url "http://cran.r-project.org/web/packages/")
(define %bioconductor-url "https://bioconductor.org/packages/")
-;; The latest Bioconductor release is 3.7. Bioconductor packages should be
+;; The latest Bioconductor release is 3.8. Bioconductor packages should be
;; updated together.
-(define %bioconductor-version "3.7")
+(define %bioconductor-version "3.8")
(define %bioconductor-packages-list-url
(string-append "https://bioconductor.org/packages/"