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70/151: gnu: r-bioccheck: Update to 1.18.0.
From: |
Ricardo Wurmus |
Subject: |
70/151: gnu: r-bioccheck: Update to 1.18.0. |
Date: |
Wed, 7 Nov 2018 06:28:48 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit a127d3522ad0a9c17c7ced74d15f4309d2fe22f3
Author: Ricardo Wurmus <address@hidden>
Date: Wed Nov 7 12:01:03 2018 +0100
gnu: r-bioccheck: Update to 1.18.0.
* gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.18.0.
[propagated-inputs]: Add r-knitr and r-biocmanager; remove r-biocinstaller.
---
gnu/packages/bioinformatics.scm | 7 ++++---
1 file changed, 4 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 31ded7c..2806fe6 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7167,13 +7167,13 @@ functionality.")
(define-public r-bioccheck
(package
(name "r-bioccheck")
- (version "1.16.0")
+ (version "1.18.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "BiocCheck" version))
(sha256
(base32
- "1srp1g809f1nn0fyqknr7r6dq89bw1xpjvmygr7cw6ffknbc671s"))))
+ "0zamvs5jar38293ff27imvwy0ra25y64ls9z8w3q1y4jcp8p8pg7"))))
(properties
`((upstream-name . "BiocCheck")))
(build-system r-build-system)
@@ -7200,8 +7200,9 @@ functionality.")
`(("r-codetools" ,r-codetools)
("r-graph" ,r-graph)
("r-httr" ,r-httr)
+ ("r-knitr" ,r-knitr)
("r-optparse" ,r-optparse)
- ("r-biocinstaller" ,r-biocinstaller)
+ ("r-biocmanager" ,r-biocmanager)
("r-biocviews" ,r-biocviews)
("r-stringdist" ,r-stringdist)))
(home-page "https://bioconductor.org/packages/BiocCheck")
- 65/151: gnu: r-grohmm: Update to 1.16.0., (continued)
- 65/151: gnu: r-grohmm: Update to 1.16.0., Ricardo Wurmus, 2018/11/07
- 45/151: gnu: r-matrix: Update to 1.2-15., Ricardo Wurmus, 2018/11/07
- 58/151: gnu: r-annotationforge: Update to 1.24.0., Ricardo Wurmus, 2018/11/07
- 49/151: gnu: r-tidyr: Update to 0.8.2., Ricardo Wurmus, 2018/11/07
- 50/151: gnu: r-preprocesscore: Update to 1.44.0., Ricardo Wurmus, 2018/11/07
- 59/151: gnu: r-rbgl: Update to 1.58.0., Ricardo Wurmus, 2018/11/07
- 62/151: gnu: r-gostats: Update to 2.48.0., Ricardo Wurmus, 2018/11/07
- 51/151: gnu: r-modelmetrics: Update to 1.2.2., Ricardo Wurmus, 2018/11/07
- 52/151: gnu: r-annotate: Update to 1.60.0., Ricardo Wurmus, 2018/11/07
- 77/151: gnu: r-limma: Update to 3.38.2., Ricardo Wurmus, 2018/11/07
- 70/151: gnu: r-bioccheck: Update to 1.18.0.,
Ricardo Wurmus <=
- 68/151: gnu: r-biocviews: Update to 1.50.1., Ricardo Wurmus, 2018/11/07
- 81/151: gnu: r-annotationdbi: Update to 1.44.0., Ricardo Wurmus, 2018/11/07
- 74/151: gnu: r-genomeinfodb: Update to 1.18.0., Ricardo Wurmus, 2018/11/07
- 61/151: gnu: r-category: Update to 2.48.0., Ricardo Wurmus, 2018/11/07
- 69/151: gnu: r-biocstyle: Update to 2.10.0., Ricardo Wurmus, 2018/11/07
- 66/151: gnu: r-biocgenerics: Update to 0.28.0., Ricardo Wurmus, 2018/11/07
- 84/151: gnu: r-biostrings: Update to 2.50.0., Ricardo Wurmus, 2018/11/07
- 67/151: gnu: r-biocinstaller: Update to 1.32.1., Ricardo Wurmus, 2018/11/07
- 83/151: gnu: r-biocparallel: Update to 1.16.0., Ricardo Wurmus, 2018/11/07
- 89/151: gnu: r-rtracklayer: Update to 1.42.0., Ricardo Wurmus, 2018/11/07