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11/19: gnu: Add r-rbamtools.
From: |
guix-commits |
Subject: |
11/19: gnu: Add r-rbamtools. |
Date: |
Wed, 9 Jan 2019 11:14:10 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit fe4e9f03492521f641e326cb21108367a44b1a63
Author: Ricardo Wurmus <address@hidden>
Date: Wed Jan 9 16:47:51 2019 +0100
gnu: Add r-rbamtools.
* gnu/packages/cran.scm (r-rbamtools): New variable.
---
gnu/packages/cran.scm | 22 ++++++++++++++++++++++
1 file changed, 22 insertions(+)
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index dd924a1..e10465b 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -10148,3 +10148,25 @@ of Schaefer and Strimmer (2005a,b,c) and Opgen-Rhein
and Strimmer (2006, 2007)
for learning large-scale gene association networks (including assignment of
putative directions).")
(license license:gpl3+)))
+
+(define-public r-rbamtools
+ (package
+ (name "r-rbamtools")
+ (version "2.16.11.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "rbamtools" version))
+ (sha256
+ (base32
+ "0gzkb1xyrkriv45wq8gv7qfwjslnvwkfkk5jjc4wg5kmm0ydpdzj"))))
+ (build-system r-build-system)
+ (inputs `(("zlib" ,zlib)))
+ (propagated-inputs
+ `(("r-refgenome" ,r-refgenome)))
+ (home-page "https://cran.r-project.org/web/packages/rbamtools")
+ (synopsis "Read and write BAM (binary alignment) files")
+ (description
+ "This package provides an R interface to functions of the SAMtools
+library.")
+ (license license:artistic2.0)))
- branch master updated (658b2b6 -> cba08f6), guix-commits, 2019/01/09
- 01/19: gnu: Add r-dotcall64., guix-commits, 2019/01/09
- 02/19: gnu: Add r-spam., guix-commits, 2019/01/09
- 04/19: gnu: Add r-spatialextremes., guix-commits, 2019/01/09
- 03/19: gnu: Add r-fields., guix-commits, 2019/01/09
- 05/19: gnu: Add r-drc., guix-commits, 2019/01/09
- 06/19: gnu: Add r-rmeta., guix-commits, 2019/01/09
- 10/19: gnu: Add r-genenet., guix-commits, 2019/01/09
- 08/19: gnu: Add r-survivalroc., guix-commits, 2019/01/09
- 07/19: gnu: Add r-bootstrap., guix-commits, 2019/01/09
- 11/19: gnu: Add r-rbamtools.,
guix-commits <=
- 09/19: gnu: Add r-longitudinal., guix-commits, 2019/01/09
- 16/19: gnu: Add r-ppls., guix-commits, 2019/01/09
- 12/19: gnu: Add r-protviz., guix-commits, 2019/01/09
- 18/19: gnu: Add r-parcor., guix-commits, 2019/01/09
- 13/19: gnu: Add r-cmprsk., guix-commits, 2019/01/09
- 14/19: gnu: Add r-etm., guix-commits, 2019/01/09
- 19/19: gnu: Add r-mcmc., guix-commits, 2019/01/09
- 17/19: gnu: Add r-huge., guix-commits, 2019/01/09
- 15/19: gnu: Add r-epi., guix-commits, 2019/01/09