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01/03: gnu: r-vegan: Move from bioinformatics to cran.
From: |
guix-commits |
Subject: |
01/03: gnu: r-vegan: Move from bioinformatics to cran. |
Date: |
Sun, 13 Jan 2019 07:04:28 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit c80fb90f4a04deca33ef7e7b92d4678ca5ef93af
Author: Ricardo Wurmus <address@hidden>
Date: Sun Jan 13 12:14:32 2019 +0100
gnu: r-vegan: Move from bioinformatics to cran.
* gnu/packages/bioinformatics.scm (r-vegan): Move from here...
* gnu/packages/cran.scm (r-vegan): ...to here.
---
gnu/packages/bioinformatics.scm | 30 ------------------------------
gnu/packages/cran.scm | 31 +++++++++++++++++++++++++++++++
2 files changed, 31 insertions(+), 30 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 42f5c3b..66785d0 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -6338,36 +6338,6 @@ between two different types of motif instances using as
much relevant
information as possible.")
(license (list license:gpl2+ license:gpl3+))))
-(define-public r-vegan
- (package
- (name "r-vegan")
- (version "2.5-3")
- (source
- (origin
- (method url-fetch)
- (uri (cran-uri "vegan" version))
- (sha256
- (base32
- "023xznh0iy0496icpchadmp7a3rk3nj9s48fvwlvp3dssw58yp3c"))))
- (build-system r-build-system)
- (native-inputs
- `(("gfortran" ,gfortran)))
- (propagated-inputs
- `(("r-cluster" ,r-cluster)
- ("r-knitr" ,r-knitr) ; needed for vignettes
- ("r-lattice" ,r-lattice)
- ("r-mass" ,r-mass)
- ("r-mgcv" ,r-mgcv)
- ("r-permute" ,r-permute)))
- (home-page "https://cran.r-project.org/web/packages/vegan")
- (synopsis "Functions for community ecology")
- (description
- "The vegan package provides tools for descriptive community ecology. It
-has most basic functions of diversity analysis, community ordination and
-dissimilarity analysis. Most of its multivariate tools can be used for other
-data types as well.")
- (license license:gpl2+)))
-
(define-public r-annotate
(package
(name "r-annotate")
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 4ba6699..1bd20b1 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -1,5 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015, 2016, 2017, 2018, 2019 Ricardo Wurmus <address@hidden>
+;;; Copyright © 2016, 2017 Ben Woodcroft <address@hidden>
;;; Copyright © 2017, 2018 Roel Janssen <address@hidden>
;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <address@hidden>
;;; Copyright © 2017 Raoul Bonnal <address@hidden>
@@ -82,6 +83,36 @@
the system clipboards.")
(license license:gpl3)))
+(define-public r-vegan
+ (package
+ (name "r-vegan")
+ (version "2.5-3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "vegan" version))
+ (sha256
+ (base32
+ "023xznh0iy0496icpchadmp7a3rk3nj9s48fvwlvp3dssw58yp3c"))))
+ (build-system r-build-system)
+ (native-inputs
+ `(("gfortran" ,gfortran)))
+ (propagated-inputs
+ `(("r-cluster" ,r-cluster)
+ ("r-knitr" ,r-knitr) ; needed for vignettes
+ ("r-lattice" ,r-lattice)
+ ("r-mass" ,r-mass)
+ ("r-mgcv" ,r-mgcv)
+ ("r-permute" ,r-permute)))
+ (home-page "https://cran.r-project.org/web/packages/vegan")
+ (synopsis "Functions for community ecology")
+ (description
+ "The vegan package provides tools for descriptive community ecology. It
+has most basic functions of diversity analysis, community ordination and
+dissimilarity analysis. Most of its multivariate tools can be used for other
+data types as well.")
+ (license license:gpl2+)))
+
(define-public r-tidyverse
(package
(name "r-tidyverse")