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01/01: gnu: Add r-illuminahumanmethylationepicmanifest.
From: |
guix-commits |
Subject: |
01/01: gnu: Add r-illuminahumanmethylationepicmanifest. |
Date: |
Wed, 13 Mar 2019 08:49:49 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 9475a248fcceaaf12733e24aeaa4c9f8cef1cec0
Author: Ricardo Wurmus <address@hidden>
Date: Wed Mar 13 13:49:20 2019 +0100
gnu: Add r-illuminahumanmethylationepicmanifest.
* gnu/packages/bioconductor.scm (r-illuminahumanmethylationepicmanifest):
New variable.
---
gnu/packages/bioconductor.scm | 26 ++++++++++++++++++++++++++
1 file changed, 26 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index f2572b4..45711ab 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -682,6 +682,32 @@ probes. It contains the compiled HumanMethylation27 and
HumanMethylation450
annotations.")
(license license:artistic2.0)))
+(define-public r-illuminahumanmethylationepicmanifest
+ (package
+ (name "r-illuminahumanmethylationepicmanifest")
+ (version "0.3.0")
+ (source (origin
+ (method url-fetch)
+ ;; We cannot use bioconductor-uri here because this tarball is
+ ;; located under "data/annotation/" instead of "bioc/".
+ (uri (string-append "https://www.bioconductor.org/packages/"
+ "release/data/annotation/src/contrib/"
+ "IlluminaHumanMethylationEPICmanifest_"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "0alhjda5g186z8b1nsmnpfswrlj7prdz8mkwx60wkkl6hkcnk6p3"))))
+ (properties
+ `((upstream-name . "IlluminaHumanMethylationEPICmanifest")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-minfi" ,r-minfi)))
+ (home-page
"https://bioconductor.org/packages/IlluminaHumanMethylationEPICmanifest/")
+ (synopsis "Manifest for Illumina's EPIC methylation arrays")
+ (description
+ "This is a manifest package for Illumina's EPIC methylation arrays.")
+ (license license:artistic2.0)))
+
;;; Experiment data