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06/06: gnu: Add r-sigpathway.
From: |
guix-commits |
Subject: |
06/06: gnu: Add r-sigpathway. |
Date: |
Mon, 25 Mar 2019 11:20:18 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit a6d867fed9d54f8fe650be45ffb781b16f26dc7a
Author: Ricardo Wurmus <address@hidden>
Date: Mon Mar 25 16:20:04 2019 +0100
gnu: Add r-sigpathway.
* gnu/packages/bioconductor.scm (r-sigpathway): New variable.
---
gnu/packages/bioconductor.scm | 22 ++++++++++++++++++++++
1 file changed, 22 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 656a594..59ca93d 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2702,3 +2702,25 @@ variances and the random variance model. As 10s of
thousands of mRNAs are
analyzed in parallell the library performs a number of tests to assure that
the data set is suitable for such analysis.")
(license license:gpl3)))
+
+(define-public r-sigpathway
+ (package
+ (name "r-sigpathway")
+ (version "1.50.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "sigPathway" version))
+ (sha256
+ (base32
+ "0pygrla2q2151981gshzv51jnj60h1df3vby5gsxqvxn2pdr4bv3"))))
+ (properties `((upstream-name . "sigPathway")))
+ (build-system r-build-system)
+ (home-page "https://www.pnas.org/cgi/doi/10.1073/pnas.0506577102")
+ (synopsis "Pathway analysis")
+ (description
+ "This package is used to conduct pathway analysis by calculating the NT_k
+and NE_k statistics in a statistical framework for determining whether a
+specified group of genes for a pathway has a coordinated association with a
+phenotype of interest.")
+ (license license:gpl2)))
- branch master updated (3080b81 -> a6d867f), guix-commits, 2019/03/25
- 03/06: gnu: Add r-heatplus., guix-commits, 2019/03/25
- 04/06: gnu: Add r-gosemsim., guix-commits, 2019/03/25
- 06/06: gnu: Add r-sigpathway.,
guix-commits <=
- 01/06: gnu: Add r-triform., guix-commits, 2019/03/25
- 02/06: gnu: Add r-varianttools., guix-commits, 2019/03/25
- 05/06: gnu: Add r-anota., guix-commits, 2019/03/25