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09/10: gnu: Add r-arrmdata.
From: |
guix-commits |
Subject: |
09/10: gnu: Add r-arrmdata. |
Date: |
Wed, 3 Apr 2019 11:42:27 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit b50c966087b908e046da06e330c01e6d7a1ae9ca
Author: Ricardo Wurmus <address@hidden>
Date: Wed Apr 3 17:41:54 2019 +0200
gnu: Add r-arrmdata.
* gnu/packages/bioconductor.scm (r-arrmdata): New variable.
---
gnu/packages/bioconductor.scm | 24 ++++++++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index d033258..b949b89 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -778,6 +778,30 @@ datasets which are derived from the Allen Brain Atlas:
All datasets are restricted to protein coding genes.")
(license license:gpl2+)))
+(define-public r-arrmdata
+ (package
+ (name "r-arrmdata")
+ (version "1.18.0")
+ (source (origin
+ (method url-fetch)
+ ;; We cannot use bioconductor-uri here because this tarball is
+ ;; located under "data/experiment/" instead of "bioc/".
+ (uri (string-append "https://www.bioconductor.org/packages/"
+ "release/data/experiment/src/contrib/"
+ "ARRmData_" version ".tar.gz"))
+ (sha256
+ (base32
+ "0r1y3zn7ly4k3ngx55vfavn9s6aidbddlv2fbmj7hj3hvpslmyly"))))
+ (properties
+ `((upstream-name . "ARRmData")))
+ (build-system r-build-system)
+ (home-page "https://www.bioconductor.org/packages/ARRmData/")
+ (synopsis "Example dataset for normalization of Illumina 450k methylation
data")
+ (description
+ "This package provides raw beta values from 36 samples across 3 groups
+from Illumina 450k methylation arrays.")
+ (license license:artistic2.0)))
+
(define-public r-hsmmsinglecell
(package
(name "r-hsmmsinglecell")
- branch master updated (8079008 -> 307586c), guix-commits, 2019/04/03
- 01/10: gnu: Add r-wrench., guix-commits, 2019/04/03
- 04/10: gnu: Add r-webbioc., guix-commits, 2019/04/03
- 02/10: gnu: Add r-wiggleplotr., guix-commits, 2019/04/03
- 08/10: gnu: Add r-progeny., guix-commits, 2019/04/03
- 07/10: gnu: Add r-rbowtie2., guix-commits, 2019/04/03
- 09/10: gnu: Add r-arrmdata.,
guix-commits <=
- 05/10: gnu: Add r-zfpkm., guix-commits, 2019/04/03
- 06/10: gnu: r-rcas: Add upstream name., guix-commits, 2019/04/03
- 10/10: gnu: Add r-arrmnormalization., guix-commits, 2019/04/03
- 03/10: gnu: Add r-widgettools., guix-commits, 2019/04/03