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80/215: gnu: r-beachmat: Update to 2.0.0.
From: |
guix-commits |
Subject: |
80/215: gnu: r-beachmat: Update to 2.0.0. |
Date: |
Sun, 5 May 2019 18:15:44 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 583b4fd6e357cab9b2d7c9ba579189a999ce7b86
Author: Ricardo Wurmus <address@hidden>
Date: Sun May 5 23:44:39 2019 +0200
gnu: r-beachmat: Update to 2.0.0.
* gnu/packages/bioinformatics.scm (r-beachmat): Update to 2.0.0.
[inputs]: Remove hdf5 and zlib.
[propagated-inputs]: Rmeove r-hdf5array, r-rcpp, r-rhdf5, and r-rhdf5lib.
---
gnu/packages/bioinformatics.scm | 13 +++----------
1 file changed, 3 insertions(+), 10 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index d07cb0a..87b2119 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10514,25 +10514,18 @@ packages.")
(define-public r-beachmat
(package
(name "r-beachmat")
- (version "1.4.0")
+ (version "2.0.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "beachmat" version))
(sha256
(base32
- "07zgmms0qg8gw7x0js46965bbhpfj2aa1h5ixdz9r332bxv9cdmr"))))
+ "14cz19fw97s8mhm9r2n5li44vckx069k8nqsyy64c3lkfm4vy4zx"))))
(build-system r-build-system)
- (inputs
- `(("hdf5" ,hdf5)
- ("zlib" ,zlib)))
(propagated-inputs
`(("r-biocgenerics" ,r-biocgenerics)
- ("r-delayedarray" ,r-delayedarray)
- ("r-hdf5array" ,r-hdf5array)
- ("r-rcpp" ,r-rcpp)
- ("r-rhdf5" ,r-rhdf5)
- ("r-rhdf5lib" ,r-rhdf5lib)))
+ ("r-delayedarray" ,r-delayedarray)))
(home-page "https://bioconductor.org/packages/beachmat")
(synopsis "Compiling Bioconductor to handle each matrix type")
(description "This package provides a consistent C++ class interface for a
- 122/215: gnu: r-qdnaseq: Update to 1.20.0., (continued)
- 122/215: gnu: r-qdnaseq: Update to 1.20.0., guix-commits, 2019/05/05
- 66/215: gnu: r-vsn: Update to 3.52.0., guix-commits, 2019/05/05
- 70/215: gnu: r-msnid: Update to 1.18.0., guix-commits, 2019/05/05
- 68/215: gnu: r-pcamethods: Update to 1.76.0., guix-commits, 2019/05/05
- 64/215: gnu: r-affyio: Update to 1.54.0., guix-commits, 2019/05/05
- 71/215: gnu: r-aroma-light: Update to 3.14.0., guix-commits, 2019/05/05
- 73/215: gnu: r-edaseq: Update to 2.18.0., guix-commits, 2019/05/05
- 72/215: gnu: r-deseq: Update to 1.36.0., guix-commits, 2019/05/05
- 75/215: gnu: Add r-biocfilecache., guix-commits, 2019/05/05
- 76/215: gnu: r-delayedmatrixstats: Update to 1.6.0., guix-commits, 2019/05/05
- 80/215: gnu: r-beachmat: Update to 2.0.0.,
guix-commits <=
- 79/215: gnu: r-singlecellexperiment: Update to 1.6.0., guix-commits, 2019/05/05
- 78/215: gnu: r-scater: Update to 1.12.0., guix-commits, 2019/05/05
- 77/215: gnu: r-scran: Update to 1.12.0., guix-commits, 2019/05/05
- 93/215: gnu: r-ggbio: Update to 1.32.0., guix-commits, 2019/05/05
- 89/215: gnu: r-ldblock: Update to 1.14.0., guix-commits, 2019/05/05
- 101/215: gnu: r-keggrest: Update to 1.24.0., guix-commits, 2019/05/05
- 103/215: gnu: r-annotationhub: Update to 2.16.0., guix-commits, 2019/05/05
- 87/215: gnu: r-gviz: Update to 1.28.0., guix-commits, 2019/05/05
- 84/215: gnu: r-fithic: Update to 1.10.0., guix-commits, 2019/05/05
- 91/215: gnu: r-snpstats: Update to 1.34.0., guix-commits, 2019/05/05