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107/215: gnu: r-rsamtools: Update to 2.0.0.
From: |
guix-commits |
Subject: |
107/215: gnu: r-rsamtools: Update to 2.0.0. |
Date: |
Sun, 5 May 2019 18:15:49 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 9bcbca135b0b6bb65abbd0b2abf1dbdffba67323
Author: Ricardo Wurmus <address@hidden>
Date: Sun May 5 23:51:32 2019 +0200
gnu: r-rsamtools: Update to 2.0.0.
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 2.0.0.
[propagated-inputs]: Add r-rhtslib.
---
gnu/packages/bioinformatics.scm | 5 +++--
1 file changed, 3 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 83299ac..f6564e7 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7733,13 +7733,13 @@ biological sequences or sets of sequences.")
(define-public r-rsamtools
(package
(name "r-rsamtools")
- (version "1.34.1")
+ (version "2.0.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "Rsamtools" version))
(sha256
(base32
- "02paq7klabdkaf1b8pmmbpmyqsj3yncnfsz62rgka6r4dpsilwk9"))))
+ "1nv5idyjk75mvl4np5sig0xa6qygm1ivj33k041ffyj19q8jf7ij"))))
(properties
`((upstream-name . "Rsamtools")))
(build-system r-build-system)
@@ -7763,6 +7763,7 @@ biological sequences or sets of sequences.")
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicranges" ,r-genomicranges)
("r-iranges" ,r-iranges)
+ ("r-rhtslib" ,r-rhtslib)
("r-s4vectors" ,r-s4vectors)
("r-xvector" ,r-xvector)))
(home-page
"https://bioconductor.org/packages/release/bioc/html/Rsamtools.html")
- 135/215: gnu: r-dnabarcodes: Update to 1.14.0., (continued)
- 135/215: gnu: r-dnabarcodes: Update to 1.14.0., guix-commits, 2019/05/05
- 143/215: gnu: r-deds: Update to 1.58.0., guix-commits, 2019/05/05
- 136/215: gnu: r-ruvseq: Update to 1.18.0., guix-commits, 2019/05/05
- 137/215: gnu: r-biocneighbors: Update to 1.2.0., guix-commits, 2019/05/05
- 157/215: gnu: r-minfi: Update to 1.30.0., guix-commits, 2019/05/05
- 145/215: gnu: r-lpsymphony: Update to 1.12.0., guix-commits, 2019/05/05
- 147/215: gnu: r-icobra: Update to 1.12.0., guix-commits, 2019/05/05
- 139/215: gnu: r-savr: Update to 1.22.0., guix-commits, 2019/05/05
- 142/215: gnu: r-dnacopy: Update to 1.58.0., guix-commits, 2019/05/05
- 166/215: gnu: r-anota: Update to 1.32.0., guix-commits, 2019/05/05
- 107/215: gnu: r-rsamtools: Update to 2.0.0.,
guix-commits <=
- 152/215: gnu: r-scone: Update to 1.8.0., guix-commits, 2019/05/05
- 162/215: gnu: r-triform: Update to 1.26.0., guix-commits, 2019/05/05
- 149/215: gnu: r-monocle: Update to 2.12.0., guix-commits, 2019/05/05
- 170/215: gnu: r-enrichplot: Update to 1.4.0., guix-commits, 2019/05/05
- 176/215: gnu: r-a4preproc: Update to 1.32.0., guix-commits, 2019/05/05
- 164/215: gnu: r-heatplus: Update to 2.30.0., guix-commits, 2019/05/05
- 174/215: gnu: r-a4core: Update to 1.32.0., guix-commits, 2019/05/05
- 179/215: gnu: r-a4: Update to 1.32.0., guix-commits, 2019/05/05
- 177/215: gnu: r-a4reporting: Update to 1.32.0., guix-commits, 2019/05/05
- 186/215: gnu: r-atacseqqc: Update to 1.8.0., guix-commits, 2019/05/05