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115/215: gnu: r-diffbind: Update to 2.12.0.
From: |
guix-commits |
Subject: |
115/215: gnu: r-diffbind: Update to 2.12.0. |
Date: |
Sun, 5 May 2019 18:15:51 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 4c221b3bbf117ee6723403c72ed4b74e8fb0ece7
Author: Ricardo Wurmus <address@hidden>
Date: Sun May 5 23:53:41 2019 +0200
gnu: r-diffbind: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 2.12.0.
[propagated-inputs]: Add r-rhtslib; remove r-zlibbioc.
---
gnu/packages/bioconductor.scm | 8 ++++----
1 file changed, 4 insertions(+), 4 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index ec3fbc7..ffa3b89 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -989,14 +989,14 @@ problems in genomics, brain imaging, astrophysics, and
data mining.")
(define-public r-diffbind
(package
(name "r-diffbind")
- (version "2.10.0")
+ (version "2.12.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "DiffBind" version))
(sha256
(base32
- "0j8pal40lr1gv8sss96hhkj7l1qn9sy4q4l2kqd4rfwl7qrcnfw5"))))
+ "1ialb1j2xa21a8dzss76qky83rg8y6jwdwi0mhy8b088zvxavich"))))
(properties `((upstream-name . "DiffBind")))
(build-system r-build-system)
(inputs
@@ -1018,11 +1018,11 @@ problems in genomics, brain imaging, astrophysics, and
data mining.")
("r-locfit" ,r-locfit)
("r-rcolorbrewer" , r-rcolorbrewer)
("r-rcpp" ,r-rcpp)
+ ("r-rhtslib" ,r-rhtslib)
("r-rsamtools" ,r-rsamtools)
("r-s4vectors" ,r-s4vectors)
("r-summarizedexperiment" ,r-summarizedexperiment)
- ("r-systempiper" ,r-systempiper)
- ("r-zlibbioc" ,r-zlibbioc)))
+ ("r-systempiper" ,r-systempiper)))
(home-page "http://bioconductor.org/packages/DiffBind")
(synopsis "Differential binding analysis of ChIP-Seq peak data")
(description
- 212/215: gnu: r-rbowtie2: Update to 1.6.0., (continued)
- 212/215: gnu: r-rbowtie2: Update to 1.6.0., guix-commits, 2019/05/05
- 206/215: gnu: r-xcms: Update to 3.6.0., guix-commits, 2019/05/05
- 211/215: gnu: r-zfpkm: Update to 1.6.0., guix-commits, 2019/05/05
- 204/215: gnu: r-xbseq: Update to 1.16.0., guix-commits, 2019/05/05
- 215/215: gnu: r-chippeakanno: Update to 3.18.0., guix-commits, 2019/05/05
- 116/215: gnu: r-ripseeker: Update to 1.24.0., guix-commits, 2019/05/05
- 129/215: gnu: r-ctc: Update to 1.58.0., guix-commits, 2019/05/05
- 134/215: gnu: r-inspect: Update to 1.14.0., guix-commits, 2019/05/05
- 113/215: gnu: r-geneplotter: Update to 1.62.0., guix-commits, 2019/05/05
- 132/215: gnu: r-rots: Update to 1.12.0., guix-commits, 2019/05/05
- 115/215: gnu: r-diffbind: Update to 2.12.0.,
guix-commits <=
- 154/215: gnu: r-illuminaio: Update to 0.26.0., guix-commits, 2019/05/05
- 146/215: gnu: r-ihw: Update to 1.12.0., guix-commits, 2019/05/05
- 182/215: gnu: r-rgadem: Update to 2.31.0., guix-commits, 2019/05/05
- 209/215: gnu: r-widgettools: Update to 1.62.0., guix-commits, 2019/05/05
- 126/215: gnu: r-riboseqr: Update to 1.18.0., guix-commits, 2019/05/05
- 131/215: gnu: r-glimma: Update to 1.12.0., guix-commits, 2019/05/05
- 138/215: gnu: r-destiny: Update to 2.14.0., guix-commits, 2019/05/05
- 150/215: gnu: r-noiseq: Update to 2.28.0., guix-commits, 2019/05/05
- 155/215: gnu: r-siggenes: Update to 1.58.0., guix-commits, 2019/05/05
- 156/215: gnu: r-bumphunter: Update to 1.26.0., guix-commits, 2019/05/05