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branch wip-texlive updated (d350d5e -> 378d94e)
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From: |
guix-commits |
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Subject: |
branch wip-texlive updated (d350d5e -> 378d94e) |
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Date: |
Tue, 6 Aug 2019 04:36:53 -0400 (EDT) |
rekado pushed a change to branch wip-texlive
in repository guix.
from d350d5e gnu: texlive-amsfonts: Build .ins file instead of
installing fonts twice.
adds 96a9a8d gnu: llvm: Add 'system->llvm-target' procedure.
adds 7304d56 gnu: julia: Update to 1.1.1.
adds 2fa23d8 deploy: Honor '--no-grafts'.
adds 3c618b9 deploy: Handle the '--system' command line option.
adds b9a178b doc: Warn about GPG warning.
adds 7dfda55 gnu: libvirt-glib: Update to 2.0.0.
adds 7e2c050 gnu: libvirt-glib: Propagate pkg-config requirements.
adds 4f20e0a gnu: spice-gtk: Update to 0.37.
adds 8126142 gnu: terminator: Propagate gsettings-desktop-schemas.
adds 97bc8c4 gnu: emacs-gitpatch: Update to 0.5.1.
adds 1c0b2e7 gnu: Add r-umap.
adds 6deb08a gnu: Add r-kableextra.
adds ad8f46c gnu: Add r-all.
adds a6fedf1 gnu: Add r-flowcore.
adds a0422d1 gnu: Add r-flowutils.
adds ed6f49f gnu: Add r-consensusclusterplus.
adds e0cb053 gnu: Add r-flowmeans.
adds 1502751 gnu: Add r-flowsom.
adds 1adb9cb gnu: Add r-mixomics.
adds a0efa06 gnu: Add r-depecher.
adds 81c3dc3 maint: Switch to Guile-JSON 3.x.
adds 584a3ca gnu: guile-json: Define 'guile-json-1'.
adds 91f5571 gnu: Explicitly refer to 'guile-json-1' when needed.
adds 8172ab2 gnu: starfighter: Update to 2.0.0.3.
adds 7c04118 gnu: Add xchm.
adds 15027b8 gnu: xpra: Update to 2.5.3.
adds 108edc9 gnu: exim: Update to 4.92.1 [fixes CVE-2019-13917].
adds ec8c168 gnu: Go 1.11: Update to 1.11.12.
adds 1074b37 gnu: Go 1.12: Update to 1.12.7.
adds f115d81 gnu: Add perl-mail-authenticationresults.
adds ac629e6 gnu: Add perl-net-dns-resolver-mock.
adds 930c52a gnu: Add perl-mail-dkim.
adds 8582202 gnu: Add dkimproxy.
adds b07aea6 gnu: clustershh: Add missing perl-sort-naturally input.
adds 12ea257 gnu: clusterssh: Don't propagate xterm.
adds 41097b2 gnu: libvirt: Don't use bogus cgroup.
adds 66e3900 gnu: dkimproxy: Add IPv6 support.
adds 2b456dd gnu: dkimproxy: Correct licence.
adds ce3a71c gnu: perl-net-dns-resolver-mock: Unpropagate perl-net-dns.
adds 858be79 gnu: perl-net-dns-resolver-mock: Edit synopsis &
description.
adds d045dce gnu: dkimproxy: Keyword-stuff descriptions.
adds 8c07824 gnu: dkimproxy: Factorise wrapping.
adds 28e4c3b gnu: dkimproxy: Fix dkim_responder.pl.
adds 3d909a0 gnu: youtube-dl: Update to 2019.07.16.
adds 332a276 gnu: clusterssh: Run.
adds cf40f8e gnu: vlc: Update to 3.0.7.1.
adds 422e187 gnu: jami-client-gnome: Rename to 'jami'.
adds c4c2449 git: 'update-cached-checkout' supports a 'tag-or-commit'
type of ref.
adds 177fecb git: <git-checkout> allows tags in its 'commit' field.
adds 10a8c2b git: 'switch-to-ref' resolves tag targets.
adds 4d04bc5 guix build: '--with-commit' recognizes "v[0-9]" tags.
adds 20269b6 gnu: sdl2: Update to 2.0.10.
adds 5c79375 guix system: Add 'reconfigure' module.
adds 5c8c8c4 guix system: Reimplement 'reconfigure'.
adds d23a00b tests: Add reconfigure system test.
adds 548e0af discovery: 'scheme-files' ignores hidden files.
adds 2cc5ec7 gexp: 'compiled-modules' can cross-compile.
adds 2e8cabb gexp: 'program-file' honors the current system and
cross-compilation target.
adds c1cae86 gnu: Add emacs-bug-hunter.
adds 74a2489 Add emacs-gnus-alias.
adds 9f0ae84 gnu: Add emacs-ox-epub.
adds 40c4c00 gnu: Add emacs-ox-pandoc.
adds d3f2f86 gnu: Add emacs-wc-mode.
adds 1a2d0d2 gnu: Add emacs-mastodon.
adds 4b03565 gnu: hpcguix-web: Update to f39c90b.
adds 24446ce gnu: linux-libre: Restrict ‘dmesg’ to privileged users.
adds d0aff87 gnu: linux-libre: Verbosely pack the deblobbed
linux-libre tarball.
adds e78c2b5 gnu: linux-libre: Update deblobbing scripts.
adds d83514b gnu: linux-libre@4.19: Update to 4.19.61.
adds 76b9672 gnu: linux-libre: Update to 5.2.3.
adds d8d7565 gnu: Add intel-vaapi-driver.
adds 3563220 gnu: Add libva-utils.
adds 85a4531 gnu: pngcrush: Edit description.
adds eca0a88 gnu: kodi: Update to 18.3.
adds bfbc2d8 gnu: zstd: Update to 1.4.2.
adds d5571bc gnu: nginx: Update to 1.17.2.
adds 9b7f721 gnu: feh: Update to 3.2.1.
adds b23579d gnu: signify: Update to 26.
adds 7e5eda0 gnu: unbound: Update to 1.9.2.
adds b64b66b gnu: linux-libre@4.19: Update to 4.19.62.
adds ab20b3e gnu: linux-libre: Update to 5.2.4.
adds 767a0a1 gnu: btrfs-progs: Update to 5.2.1.
adds 06c2d0e gnu: Add go-golang-org-x-text-encoding.
adds 7e6da91 gnu: go-golang-org-x-text-transform: Inherit from related
package.
adds bd184dc gnu: go-golang-org-x-text-unicode-norm: Inherit from
related package.
adds be42a38 gnu: Add go-golang-org-sql-mock.
adds a881a08 gnu: Add go-golang-org-colorful.
adds 42a0cfe gnu: Add go-github-com-gdamore-encoding.
adds d050000 gnu: go-github.com-mattn-go-runewidth: Update to
0.0.4-1.703b5e6.
adds a6689b9 gnu: Add go-github-com-gdamore-tcell.
adds f815735 gnu: Add go-github-com-mattn-go-shellwords.
adds cb3625b gnu: Add go-github-com-junegunn-fzf.
adds 33b67ef gnu: Add go-golang-org-x-tools.
adds 5bbf203 gnu: Add go-golang-org-x-crypto.
adds a3b1dc4 gnu: Add go-github-com-marten-seemann-qtls.
adds 8201afd gnu: Add go-github-com-cheekybits-genny.
adds 6d766be gnu: Add go-github-com-lucas-clemente-quic-go.
adds 2da5275 gnu: Move go-github-com-pkg-errors to the Golang package
module.
adds 8c6be10 gnu: go-github-com-pkg-errors: Update to 0.8.1-0.27936f6.
adds ea22aa1 gnu: Add go-github-com-certifi-gocertifi.
adds 8ffc727 gnu: go-github-com-getsentry-raven-go: Update to
0.2.0-0.5c24d51.
adds d0ced44 gnu: Add go-github-com-maruel-panicparse.
adds e5906bb gnu: Go Prometheus tools: Update to 0.9.3.
adds 7cb9c4e gnu: Add go-github-com-audriusbutkevicius-pfilter.
adds 48e1cbd gnu: Add go-github-com-ccding-go-stun.
adds a93e239 gnu: go-github-com-syndtr-goleveldb: Update to
1.0.1-3.c3a204f.
adds 8629d8e gnu: Prometheus Go client: Update to 0.9.4.
adds c17e69b gnu: go-gopkg-in-yaml-v2: Update to 2.2.2.
adds a2dbcfd gnu: go-gopkg-in-check-v1: Update to v1-1.0.0-1.788fd78.
adds 957e6f7 gnu: Go standard 'sys' packages: Update to
0.0.0-3.5ed2794.
adds 307f2c4 gnu: Go standard library 'net' packages: Update to
0.0.0-3.d28f0bd.
adds 371b704 gnu: go-github-com-prometheus-client-model-go: Update to
0.0.2-1.fd36f42.
adds a85a78e gnu: go-github-com-golang-protobuf-proto: Update to 1.3.1.
adds eebf638 gnu:
go-github-com-prometheus-common-internal-bitbucket-org-ww-goautoneg: Update to
0.4.1.
adds 2cdfaa0 gnu: go-github-com-prometheus-procfs: Update to 0.0.3.
adds 695d2a3 gnu: go-github-com-prometheus-common-model: Update to
0.4.1.
adds 2047089 gnu: go-github-com-prometheus-common-expfmt: Update to
0.4.1.
adds 0c3c597 gnu: Update default Go compiler to Go 1.12.
adds 18c4b0a gnu: Syncthing: Update to 1.2.0.
adds be27b8f gnu: youtube-dl: Update to 2019.07.30.
adds 983906b gnu: Add r-d3r.
adds b03dd5c gnu: Add r-sankeyd3.
adds 79f0492 gnu: Add r-glasso.
adds b46a0ee gnu: Add r-cicero.
adds 37120e7 gnu: Add r-rhpcblasctl.
adds 3e63f07 gnu: Add r-pbmcapply.
adds 8f7d7cd gnu: Add r-speedglm.
adds c4a5ce4 gnu: Add r-rcppparallel.
adds 0b2883e gnu: Add r-grr.
adds cf51d89 gnu: Add r-matrix-utils.
adds 86c46d7 gnu: Add r-uwot.
adds b2dce6b gnu: Add r-monocle3.
adds c55cd98 gnu: Add scintilla.
adds 2363ed0 gnu: Add geany.
adds 5473261 gnu: grammalecte: Update to 1.2.1.
adds f9622ec gnu: flare-engine: Update to 1.11.
adds ffbaefc gnu: flare-game: Update to 1.11.
adds 274ba54 gnu: Blender: Update to 2.80.
adds 33abd52 gnu: hubbub: Update to 0.3.6.
adds c033093 gnu: libwapcaplet: Update to 0.4.2.
adds 816edf3 gnu: libcss: Update to 0.9.0.
adds 2dd9b64 gnu: libdom: Update to 0.4.0.
adds 0a7473f gnu: libnspsl: Update to 0.1.5.
adds 595d4ab gnu: nsgenbind: Update to 0.7.
adds 33d1308 gnu: netsurf: Update to 3.9.
adds 2c61897 gnu: Add libnslog.
adds 9e43348 gnu: netsurf: Add libnslog input.
adds 9898a2d gnu: python-glances: Update to 3.1.1.
adds 15b4c91 gnu: python-glances: Don't check for updates by default.
adds bab94ff gnu: python-glances: Please ‘guix lint’.
adds e4ce009 gnu: Add sbcl-mk-string-metrics.
adds becb69c gnu: Add emacs-org-redmine.
adds 7169084 gnu: emacs-org-ql: Update to 0.1.
adds 3d88855 gnu: claws-mail: Add startup-notification.
adds 14bb1c4 gnu: Add r-cicero-monocle3.
adds af825b1 gnu: Remove python2-trezor and python2-trezor-agent.
adds fd9832e gnu: linux-libre@4.14: Update to 4.14.135.
adds ead739e gnu: linux-libre@4.19: Update to 4.19.63.
adds ee825b5 gnu: linux-libre: Update to 5.2.5.
adds 6af4cb3 gnu: blender: Remove stale warning about it being an RC
build.
adds 7018f92 gnu: sane-backends-minimal: Update to 1.0.28.
adds a094693 gnu: sane-backends: Build back ends that need JPEG
support.
adds 3935507 gnu: intel-vaapi-driver: Restrict supported systems.
adds e7dfbae gnu: mksh: Update to 57.
adds 0ca3ee4 gnu: wireshark: Update to 3.0.3.
adds 01b37d0 gnu: Add trezord.
adds a41cd13 gnu: python-duniterpy: Update to 0.55.1.
adds 5d72793 gnu: silkaj: Update to 0.7.3.
adds d623e98 gnu: snap: Update to 5.0.8.
adds d9e3f9d gnu: giac: Update to 1.5.0-63.
adds 9b76aa1 gnu: php: Don't use NAME in source URI.
adds 951fd85 gnu: pcre@2: Fix run-time crash [security fix].
adds 61919f0 gnu: php: Update to 7.3.8.
adds a17fe3f gnu: Add missing pcre2-fix-jit_match-crash.patch.
adds 4bb1582 gnu: fontforge: Update to 20190801.
adds 3ab8c22 gnu: fontforge: Use top-level home page.
adds 7c13793 Revert "gnu: fontforge: Update to 20190801."
adds 1db6f13 reconfigure: Reload all shepherd files when upgrading
services.
adds 6ba457c gnu: Add sbcl-cl-str.
adds 000faac gnu: sbcl-trivia: Fix .asd loading.
adds ad9fd1b gnu: texmacs: Update to 1.99.11.
adds 095c09c gnu: krita: Update to 4.2.5.
adds 82ebb78 gnu: you-get: Update to 0.4.1328.
adds 09fd82c gnu: wine-staging: Update to 4.13.
adds 036feaf gnu: wine64-staging: Adapt patch script.
adds 2d0e802 gnu: guile-next: Update to 2.9.3.
adds 144cb83 gnu: youtube-dl: Update to 2019.08.02.
adds b5e912a gnu: man-pages: Update to 5.02.
adds 9ea820a gnu: mtd-utils: Update to 2.1.1.
adds f8f2b04 gnu: mtd-utils: Support cryptography.
adds 245fae9 gnu: gmp: Use @acronym{} in Texinfo.
adds 932b607 gnu: mpfr: Use @acronym{} in Texinfo.
adds aaf80ba gnu: mpc: Use @acronym{} in Texinfo.
adds ded545d gnu: mpfi: Use @acronym{} in Texinfo.
adds ac6b784 build/cargo-build-system: Patch cargo checksums.
adds f339cb1 gnu: re2: Update to 2019-08-01.
adds 7f2e852 gnu: ungoogled-chromium: Update to 76.0.3809.87-0.6ea9390.
adds e920037 gnu: docker-cli: Print a usable version string.
adds 9728def gnu: enchant: Update to 2.2.5.
adds febbe43 gnu: exiv2: Update to 0.27.2.
adds 16feaee gnu: libevent: Update to 2.1.11.
adds 2e2db09 gnu: strace: Update to 5.2.
adds 4f86825 gnu: samba: Update to 4.10.6.
adds cb96d23 gnu: i3status: Update to 2.13.
adds 15b5963 gnu: i3-wm: Update to 4.17.
adds 621ce95 gnu: x265: Update source URI.
adds 5b689de gnu: x265: Update to 3.1.2.
adds e643d90 gnu: docker-compose: Remove Windows-specific input.
adds d12578f gnu: python-docker-py: Propagate dependencies.
adds 35600cd gnu: docker-compose: Remove inputs for old Python
versions.
adds 95580bd gnu: nss: Update to 3.45 [security fixes].
adds 71f9016 gnu: linux-libre@4.4: Update to 4.4.187.
adds 8079493 gnu: linux-libre@4.9: Update to 4.9.187.
adds cf19417 gnu: linux-libre@4.14: Update to 4.14.136.
adds b4478eb gnu: linux-libre@4.19: Update to 4.19.64.
adds 5ee4d11 gnu: linux-libre: Update to 5.2.6.
adds d9340de gnu: khmer: Make gzip timestamps writable.
adds 71804546 gnu: python-scikit-learn: Make gzip timestamps writable.
adds dedafb9 gnu: emacs-org: Update to 9.2.5.
adds b705b13 gnu: emacs-org-contrib: Update to 20190805.
adds 213315d gnu: Add libhandy.
adds 7fb91e4 gnu: emacs-helm: Update to 3.3.
adds 91b351d gnu: Add emacs-evil-traces.
adds 0074b1e gnu: Add emacs-scroll-on-drag.
adds 1239146 gnu: emacs-magit-todos: Update to 1.3.
adds 1a24d8b gnu: Add emacs-helm-org-rifle.
adds 76c2e51 gnu: Add emacs-dired-toggle-sudo.
adds aca6091 gnu: emacs-highlight-indentation: Update to
0.7.0-1.d03803f.
adds fef0885 gnu: emacs-so-long: Update to 1.0-2.cfae473.
adds f48aa64 gnu: emacs-evil-expat: Update to 0.0.1-1.f4fcd0a.
adds 10989c5 gnu: emacs-lua-mode: Update to 20151025-2.95c64bb.
adds 365e94c gnu: emacs-counsel-etags: Update to 1.8.7.
adds 594d60a gnu: emacs-nodejs-repl: Update to 0.2.2.
adds d052e51 gnu: Add emacs-mc-extras.
adds c07f311 gnu: Add emacs-hercules.
adds 16fdde7 gnu: Add emacs-math-symbol-lists.
adds 12dd1a4 gnu: Add emacs-company-math.
adds f94ae7d gnu: Add emacs-nswbuff.
adds 003d153 gnu: emacs-dired-hacks: Update to 0.0.1-2.886befe.
adds 4d48e27 gnu: Add emacs-org-sidebar.
adds e15ec8b gnu: emacs-org-super-agenda: Update to 1.1.1-1.375bde4.
adds 0fae1b6 Revert "gnu: nss: Update to 3.45 [security fixes]."
adds d866acc gnu: python-libvirt: Update to 5.6.0.
adds 7b88b71 gnu: libvirt: Update to 5.6.0.
adds 96681d4 gnu: terminator: Wrap instead of propagating GSettings
schemas.
adds 2426e2c gnu: strace: Fix test failures on some systems.
adds b0c4882 gnu: flatpak: Update to 1.4.2.
adds aac6c53 gnu: libmad: Add more security fixes from Debian.
adds 6a51981 gnu: emacs-ivy: Update to 0.12.0-1.d3e4514.
new 378d94e Merge remote-tracking branch 'origin/master' into
wip-texlive
The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
Makefile.am | 1 +
configure.ac | 4 +-
doc/guix.texi | 24 +-
gnu/installer.scm | 4 +-
gnu/installer/locale.scm | 21 +-
gnu/local.mk | 8 +-
gnu/machine/ssh.scm | 189 +----
gnu/packages/admin.scm | 54 +-
gnu/packages/algebra.scm | 4 +-
gnu/packages/bioconductor.scm | 384 +++++++++-
gnu/packages/bioinformatics.scm | 14 +-
gnu/packages/chromium.scm | 98 ++-
gnu/packages/ci.scm | 2 +-
gnu/packages/compression.scm | 4 +-
gnu/packages/cran.scm | 362 +++++++++
gnu/packages/crypto.scm | 11 +-
gnu/packages/dictionaries.scm | 4 +-
gnu/packages/dns.scm | 5 +-
gnu/packages/docker.scm | 16 +-
gnu/packages/ebook.scm | 27 +-
gnu/packages/education.scm | 4 +-
gnu/packages/emacs-xyz.scm | 710 ++++++++++++++----
gnu/packages/enchant.scm | 4 +-
gnu/packages/finance.scm | 39 +-
gnu/packages/fontutils.scm | 2 +-
gnu/packages/games.scm | 31 +-
gnu/packages/gnome.scm | 61 +-
gnu/packages/golang.scm | 605 ++++++++++++---
gnu/packages/graphics.scm | 16 +-
gnu/packages/guile-xyz.scm | 6 +-
gnu/packages/guile.scm | 48 +-
gnu/packages/image-viewers.scm | 4 +-
gnu/packages/image.scm | 8 +-
gnu/packages/julia.scm | 262 ++++---
gnu/packages/kde.scm | 4 +-
gnu/packages/kodi.scm | 4 +-
gnu/packages/libevent.scm | 4 +-
gnu/packages/linux.scm | 70 +-
gnu/packages/lisp.scm | 85 ++-
gnu/packages/llvm.scm | 25 +-
gnu/packages/machine-learning.scm | 10 +-
gnu/packages/mail.scm | 145 +++-
gnu/packages/man.scm | 4 +-
gnu/packages/mp3.scm | 3 +-
gnu/packages/multiprecision.scm | 25 +-
gnu/packages/networking.scm | 28 +-
gnu/packages/package-management.scm | 9 +-
.../patches/dkimproxy-add-ipv6-support.patch | 75 ++
.../patches/emacs-dired-toggle-sudo-emacs-26.patch | 49 ++
gnu/packages/patches/libmad-frame-length.patch | 199 -----
gnu/packages/patches/libmad-length-check.patch | 819 +++++++++++++++++++++
gnu/packages/patches/libmad-md_size.patch | 60 ++
.../patches/pcre2-fix-jit_match-crash.patch | 25 +
gnu/packages/patches/strace-ipc-tests.patch | 30 +
gnu/packages/pcre.scm | 12 +
gnu/packages/php.scm | 12 +-
gnu/packages/python-xyz.scm | 25 +-
gnu/packages/regex.scm | 4 +-
gnu/packages/samba.scm | 4 +-
gnu/packages/scanner.scm | 12 +-
gnu/packages/sdl.scm | 4 +-
gnu/packages/shells.scm | 9 +-
gnu/packages/spice.scm | 21 +-
gnu/packages/syncthing.scm | 155 ++--
gnu/packages/telephony.scm | 7 +-
gnu/packages/terminals.scm | 30 +
gnu/packages/text-editors.scm | 138 +++-
gnu/packages/textutils.scm | 47 +-
gnu/packages/tls.scm | 28 +-
gnu/packages/video.scm | 101 ++-
gnu/packages/virtualization.scm | 48 +-
gnu/packages/web.scm | 87 ++-
gnu/packages/wine.scm | 15 +-
gnu/packages/wm.scm | 20 +-
gnu/packages/xorg.scm | 4 +-
gnu/services/herd.scm | 6 +
gnu/system/vm.scm | 2 +-
gnu/tests/reconfigure.scm | 262 +++++++
guix/build/cargo-build-system.scm | 48 +-
guix/build/go-build-system.scm | 3 +
guix/discovery.scm | 8 +-
guix/docker.scm | 19 +-
guix/gexp.scm | 49 +-
guix/git-download.scm | 4 +-
guix/git.scm | 69 +-
guix/import/cpan.scm | 14 +-
guix/import/crate.scm | 6 +-
guix/import/gem.scm | 10 +-
guix/import/github.scm | 13 +-
guix/import/json.scm | 11 +-
guix/import/launchpad.scm | 13 +-
guix/import/pypi.scm | 8 +-
guix/import/stackage.scm | 4 +-
guix/import/utils.scm | 25 +-
guix/scripts/build.scm | 13 +-
guix/scripts/deploy.scm | 14 +-
guix/scripts/import/json.scm | 2 +-
guix/scripts/pack.scm | 2 +-
guix/scripts/system.scm | 181 +----
guix/scripts/system/reconfigure.scm | 232 ++++++
guix/self.scm | 2 +-
guix/swh.scm | 35 +-
m4/guix.m4 | 21 +
tests/gexp.scm | 19 +
tests/guix-build-branch.sh | 8 +-
tests/import-utils.scm | 22 +
tests/services.scm | 4 -
107 files changed, 5177 insertions(+), 1444 deletions(-)
create mode 100644 gnu/packages/patches/dkimproxy-add-ipv6-support.patch
create mode 100644 gnu/packages/patches/emacs-dired-toggle-sudo-emacs-26.patch
delete mode 100644 gnu/packages/patches/libmad-frame-length.patch
create mode 100644 gnu/packages/patches/libmad-length-check.patch
create mode 100644 gnu/packages/patches/libmad-md_size.patch
create mode 100644 gnu/packages/patches/pcre2-fix-jit_match-crash.patch
create mode 100644 gnu/packages/patches/strace-ipc-tests.patch
create mode 100644 gnu/tests/reconfigure.scm
create mode 100644 guix/scripts/system/reconfigure.scm
- branch wip-texlive updated (d350d5e -> 378d94e),
guix-commits <=