[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
branch wip-texlive updated (378d94e -> 9bd1333)
From: |
guix-commits |
Subject: |
branch wip-texlive updated (378d94e -> 9bd1333) |
Date: |
Wed, 7 Aug 2019 16:27:15 -0400 (EDT) |
rekado pushed a change to branch wip-texlive
in repository guix.
from 378d94e Merge remote-tracking branch 'origin/master' into
wip-texlive
adds 932f795 gnu: kitty: Update to 0.14.3.
adds 49fd98b gnu: faudio: Update to 19.08.
adds 6eccb08 gnu: r-boot: Update to 1.3-23.
adds ecebfe5 gnu: r-foreign: Update to 0.8-72.
adds d6e54e7 gnu: r-nlme: Update to 3.1-141.
adds c2e85d0 gnu: r-digest: Update to 0.6.20.
adds eae8e56 gnu: r-testthat: Update to 2.2.1.
adds 7d36001 gnu: r-dplyr: Update to 0.8.3.
adds 8d932e7 gnu: r-coda: Update to 0.19-3.
adds b29ecb8 gnu: r-xml2: Update to 1.2.1.
adds c02bb7e gnu: r-checkmate: Update to 1.9.4.
adds 3511aff gnu: r-openssl: Update to 1.4.1.
adds 9236b2c gnu: r-httr: Update to 1.4.1.
adds 1df8708 gnu: r-git2r: Update to 0.26.1.
adds 78896ba gnu: r-devtools: Update to 2.1.0.
adds 9b02d1c gnu: r-hms: Update to 0.5.0.
adds 6af62ad gnu: r-rcpparmadillo: Update to 0.9.600.4.0.
adds feb261e gnu: r-rmarkdown: Update to 1.14.
adds 2de0f88 gnu: r-blob: Update to 1.2.0.
adds 9075204 gnu: r-rsqlite: Update to 2.1.2.
adds b41d03d gnu: r-iterators: Update to 1.0.12.
adds 5a01128 gnu: r-foreach: Update to 1.4.7.
adds 8629598 gnu: r-doparallel: Update to 1.0.15.
adds 8d84a0a gnu: r-domc: Update to 1.3.6.
adds b2fea05 gnu: r-rngtools: Update to 1.4.
adds db93ef0 gnu: r-cowplot: Update to 1.0.0.
adds 58aa971 gnu: r-fastica: Update to 1.2-2.
adds ddfd0af gnu: r-mclust: Update to 5.4.5.
adds 0910ff0 gnu: r-robust: Update to 0.4-18.1.
adds 599fbee gnu: r-pbapply: Update to 1.4-1.
adds 17e43c4 gnu: r-quantreg: Update to 5.42.1.
adds d36430d gnu: r-desolve: Update to 1.24.
adds 710ecc9 gnu: r-clipr: Update to 0.7.0.
adds 6a04f25 gnu: r-ellipsis: Update to 0.2.0.1.
adds 3e0128e gnu: r-callr: Update to 3.3.1.
adds b44c120 gnu: r-curl: Update to 4.0.
adds b89805f gnu: r-haven: Update to 2.1.1.
adds cd7e9fb gnu: r-pkgbuild: Update to 1.0.4.
adds 4522ec8 gnu: r-rcpp: Update to 1.0.2.
adds 80cdd36 gnu: r-lpsolve: Update to 5.6.13.2.
adds 3337fd1 gnu: r-energy: Update to 1.7-6.
adds 099b7c5 gnu: r-lava: Update to 1.6.6.
adds f3640ce gnu: Add r-linprog.
adds a80620b gnu: r-geometry: Update to 0.4.2.
adds 417f7ed gnu: r-recipes: Update to 0.1.6.
adds bed3424 gnu: r-jomo: Update to 2.6-9.
adds 04d42a9 gnu: r-mice: Update to 3.6.0.
adds 83e3e72 gnu: r-hardyweinberg: Update to 1.6.3.
adds 7098019 gnu: r-vioplot: Update to 0.3.2.
adds 503d5b5 gnu: r-processx: Update to 3.4.1.
adds 56444d1 gnu: r-vctrs: Update to 0.2.0.
adds 9f8f2d9 gnu: r-pillar: Update to 1.4.2.
adds dbd3950 gnu: r-shinyace: Update to 0.4.0.
adds 9c69d79 gnu: r-radiant-data: Update to 1.0.0.
adds cc7176c gnu: r-zip: Update to 2.0.3.
adds e3abc13 gnu: r-dosnow: Update to 1.0.18.
adds 2d36377 gnu: r-reticulate: Update to 1.13.
adds c187e8f gnu: r-factominer: Update to 1.42.
adds 72c967e gnu: r-abn: Update to 2.1.
adds 44de742 gnu: r-insight: Update to 0.4.1.
adds a510dc6 gnu: r-proc: Update to 1.15.3.
adds 2634feb gnu: r-raster: Update to 2.9-23.
adds 332c8df gnu: r-magick: Update to 2.1.
adds 5357c59 gnu: r-emmeans: Update to 1.4.
adds 5ae4cbb gnu: r-performance: Update to 0.3.0.
adds 7343fa8 gnu: r-ggeffects: Update to 0.11.0.
adds a5a6481 gnu: r-sjplot: Update to 2.7.0.
adds 99765ab gnu: r-usethis: Update to 1.5.1.
adds 65555b1 gnu: r-afex: Update to 0.24-1.
adds ef93e90 gnu: r-rgl: Update to 0.100.26.
adds 14148ef gnu: r-tidytree: Update to 0.2.5.
adds e0f20dc gnu: r-sparsesvd: Update to 0.2.
adds b154b02 gnu: r-flare: Update to 1.6.0.2.
adds 12618b5 gnu: r-rnifti: Update to 0.11.1.
adds 031afc4 gnu: r-shades: Update to 1.4.0.
adds 6275418 gnu: Add r-gargle.
adds 504a513 gnu: r-bigrquery: Update to 1.2.0.
adds ffb97e6 gnu: r-spatialextremes: Update to 2.0-7.2.
adds d5d631b gnu: r-future: Update to 1.14.0.
adds eebd93e gnu: r-rsvd: Update to 1.0.2.
adds 01629c6 gnu: r-bayesm: Update to 3.1-3.
adds 51c9504 gnu: r-lavaan: Update to 0.6-4.
adds bd00835 gnu: r-irkernel: Update to 1.0.2.
adds 8518744 gnu: r-rematch2: Update to 2.1.0.
adds 24d4398 gnu: r-classint: Update to 0.4-1.
adds 4eed03e gnu: r-deldir: Update to 0.1-23.
adds 2deb152 gnu: r-sf: Update to 0.7-7.
adds 1a88de1 gnu: r-ldheatmap: Update to 0.99-7.
adds 22d556a gnu: r-bookdown: Update to 0.12.
adds 006c3dc gnu: r-dalex: Update to 0.4.4.
adds 5b87fae gnu: r-enrichr: Update to 2.0.
adds 6fa5987 gnu: r-citr: Update to 0.3.1.
adds 00300de gnu: r-xgboost: Update to 0.90.0.2.
adds 8a5f9d3 gnu: r-edger: Update to 3.26.6.
adds fbd761f gnu: r-limma: Update to 3.40.6.
adds 2ebd2b4 gnu: r-biomart: Update to 2.40.3.
adds 6f8760d gnu: r-summarizedexperiment: Update to 1.14.1.
adds e16fe0b gnu: r-rtracklayer: Update to 1.44.2.
adds 76d9b08 gnu: r-genomicfeatures: Update to 1.36.4.
adds afe4be4 gnu: r-rcas: Update to 1.10.1.
adds c8e141a gnu: r-msnid: Update to 1.18.1.
adds 109b8ad gnu: r-chippeakanno: Update to 3.18.2.
adds fcbd896 gnu: r-genomicinteractions: Update to 1.18.1.
adds fbe5a08 gnu: r-atacseqqc: Update to 1.8.5.
adds d6158ec gnu: r-abaenrichment: Update to 1.14.1.
adds b120789 gnu: r-rsubread: Update to 1.34.6.
adds 86445c8 gnu: ffmpeg: Update to 4.2.
adds ec405a4 gnu: perl-hash-merge: Change inputs to propagated-inputs.
adds 5bc7519 doc: Add note about signing keys.
adds d97ce20 machine: Rename 'system' field.
adds 5f04e9f reconfigure: Fix GC root installation.
adds fd3119d machine: Implement safety checks.
adds 5fe9ce9 gnu: r-bayestestr: Update to 0.2.5.
adds f275894 gnu: r-ggplotify: Update to 0.0.4.
adds ad68145 gnu: linux-libre@4.4: Update to 4.4.188.
adds 2b6c7a7 gnu: linux-libre@4.9: Update to 4.9.188.
adds 7acea31 gnu: linux-libre@4.14: Update to 4.14.137.
adds 9f90e58 gnu: linux-libre@4.19: Update to 4.19.65.
adds 9d52e3f gnu: linux-libre: Update to 5.2.7.
adds 18e7005 gnu: dolphin-emu: Update to commit 24718c1.
adds f503ed9 gnu: r-servr: Update to 0.15.
adds 33af00e gnu: r-tinytex: Update to 0.15.
adds 2132e92 gnu: r-ggpubr: Update to 0.2.2.
adds 42a8b01 gnu: r-epi: Update to 2.38.
adds fdc0688 gnu: r-dt: Update to 0.8.
adds 9fa7c20 gnu: gnome-maps: Fix runtime error.
adds 0d7f282 gnu: openconnect: Fix propagated-inputs.
adds db736ca gnu: ocproxy: Remove extra build phase.
adds fe7023a gnu: i3blocks: Remove extra build phase.
adds 2230039 gnu: vapoursynth: Remove extra build phase.
adds d05e607 gnu: libsmpeg: Remove extra build phase.
adds 1d05b68 gnu: libmediainfo: Remove extra build phase.
adds 02abfcc gnu: libetpan: Rework custom phases.
adds 7b0efd4 gnu: dovecot-trees: Remove extra build phase.
adds 1f53fda gnu: dovecot-libsodium-plugin: Remove extra build phase.
adds e3a6993 gnu: ghmm: Update source file-name field.
adds a491856 gnu: ghmm: Remove extra build phase.
adds 384242a gnu: leptonica: Remove extra build phase.
adds 3192f25 gnu: zimg: Remove extra build phase.
adds 72bc58f gnu: dosbox: Remove extra build phase.
adds 355ba48 gnu: igt-gpu-tools: Rework custom phases.
adds ec12235 reconfigure: Improve tests for system activation.
adds 55e238f deploy: Use all machine modules when loading deployment
new 9bd1333 Merge remote-tracking branch 'origin/master' into
wip-texlive
The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "adds" were already present in the repository and have only
been added to this reference.
Summary of changes:
doc/guix.texi | 20 ++-
gnu/machine.scm | 12 +-
gnu/machine/ssh.scm | 148 ++++++++++++++++-
gnu/packages/admin.scm | 2 +-
gnu/packages/audio.scm | 4 +-
gnu/packages/bioconductor.scm | 20 +--
gnu/packages/bioinformatics.scm | 32 ++--
gnu/packages/cran.scm | 319 +++++++++++++++++++++---------------
gnu/packages/emulators.scm | 12 +-
gnu/packages/geo.scm | 9 +-
gnu/packages/image.scm | 9 -
gnu/packages/linux.scm | 20 +--
gnu/packages/machine-learning.scm | 7 +-
gnu/packages/mail.scm | 16 +-
gnu/packages/maths.scm | 4 +-
gnu/packages/perl.scm | 2 +-
gnu/packages/statistics.scm | 139 ++++++++--------
gnu/packages/terminals.scm | 6 +-
gnu/packages/video.scm | 32 ++--
gnu/packages/vpn.scm | 12 +-
gnu/packages/wm.scm | 2 -
gnu/tests/reconfigure.scm | 32 +++-
guix/scripts/deploy.scm | 6 +-
guix/scripts/system/reconfigure.scm | 20 ++-
24 files changed, 551 insertions(+), 334 deletions(-)
- branch wip-texlive updated (378d94e -> 9bd1333),
guix-commits <=