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01/12: gnu: Add r-mutoss.
From: |
guix-commits |
Subject: |
01/12: gnu: Add r-mutoss. |
Date: |
Mon, 9 Dec 2019 12:11:34 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit f21147625fe050721635f6e28f0f8bb48b9d0529
Author: Ricardo Wurmus <address@hidden>
Date: Mon Dec 9 18:04:34 2019 +0100
gnu: Add r-mutoss.
* gnu/packages/bioconductor.scm (r-mutoss): New variable.
---
gnu/packages/bioconductor.scm | 28 ++++++++++++++++++++++++++++
1 file changed, 28 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 5c191a2..733d4ec 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -3044,6 +3044,34 @@ for DNA and protein sequences. This package supports
several sequence
kernels, including: gkmSVM, kmer-SVM, mismatch kernel and wildcard kernel.")
(license license:gpl2+)))
+;; This is a CRAN package, but it depends on multtest from Bioconductor.
+(define-public r-mutoss
+ (package
+ (name "r-mutoss")
+ (version "0.1-12")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "mutoss" version))
+ (sha256
+ (base32
+ "1yk7p7pb2xm38d3j19ysgwmix48lvimbhkhjjwk5jmr1a0ysx298"))))
+ (properties `((upstream-name . "mutoss")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-multcomp" ,r-multcomp)
+ ("r-multtest" ,r-multtest)
+ ("r-mvtnorm" ,r-mvtnorm)
+ ("r-plotrix" ,r-plotrix)))
+ (home-page "https://github.com/kornl/mutoss/")
+ (synopsis "Unified multiple testing procedures")
+ (description
+ "This package is designed to ease the application and comparison of
+multiple hypothesis testing procedures for FWER, gFWER, FDR and FDX. Methods
+are standardized and usable by the accompanying mutossGUI package.")
+ ;; Any version of the GPL.
+ (license (list license:gpl2+ license:gpl3+))))
+
(define-public r-triform
(package
(name "r-triform")
- branch master updated (7e16db9 -> bf770d9), guix-commits, 2019/12/09
- 02/12: gnu: r-data-table: Update to 1.12.8., guix-commits, 2019/12/09
- 01/12: gnu: Add r-mutoss.,
guix-commits <=
- 03/12: gnu: r-rcpparmadillo: Update to 0.9.800.3.0., guix-commits, 2019/12/09
- 06/12: gnu: r-energy: Update to 1.7-7., guix-commits, 2019/12/09
- 04/12: gnu: r-r-utils: Update to 2.9.2., guix-commits, 2019/12/09
- 07/12: gnu: r-cli: Update to 2.0.0., guix-commits, 2019/12/09
- 08/12: gnu: r-renv: Update to 0.9.1., guix-commits, 2019/12/09
- 09/12: gnu: r-globals: Update to 0.12.5., guix-commits, 2019/12/09
- 05/12: gnu: r-callr: Update to 3.4.0., guix-commits, 2019/12/09
- 10/12: gnu: r-umap: Update to 0.2.4.0., guix-commits, 2019/12/09
- 12/12: gnu: r-metap: Update to 1.2., guix-commits, 2019/12/09
- 11/12: gnu: Add r-tfisher., guix-commits, 2019/12/09