[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
144/265: gnu: r-biomart: Update to 2.42.0.
From: |
guix-commits |
Subject: |
144/265: gnu: r-biomart: Update to 2.42.0. |
Date: |
Sun, 15 Dec 2019 09:40:25 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 68a9d9f26a306a54c79536a832d35d856f7179d3
Author: Ricardo Wurmus <address@hidden>
Date: Sun Dec 15 15:13:05 2019 +0100
gnu: r-biomart: Update to 2.42.0.
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.42.0.
[propagated-inputs]: Add r-biocfilecache, r-openssl, and r-rappdirs; remove
r-rcurl.
---
gnu/packages/bioinformatics.scm | 8 +++++---
1 file changed, 5 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index b14289e..e85ccad 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7648,21 +7648,23 @@ annotation data packages using SQLite data storage.")
(define-public r-biomart
(package
(name "r-biomart")
- (version "2.40.5")
+ (version "2.42.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "biomaRt" version))
(sha256
(base32
- "1kjvxnkpsx3j2hji3cg3ka2gv8a9mg117lzzxyqjb7qa4zw7dipx"))))
+ "0difh4dsccjzhpfkvajy2adh98ym9164gd6clnsnic6qr6sk86ss"))))
(properties
`((upstream-name . "biomaRt")))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
+ ("r-biocfilecache" ,r-biocfilecache)
("r-httr" ,r-httr)
+ ("r-openssl" ,r-openssl)
("r-progress" ,r-progress)
- ("r-rcurl" ,r-rcurl)
+ ("r-rappdirs" ,r-rappdirs)
("r-stringr" ,r-stringr)
("r-xml" ,r-xml)))
(home-page "https://bioconductor.org/packages/biomaRt")
- 160/265: gnu: r-shortread: Update to 1.44.0., (continued)
- 160/265: gnu: r-shortread: Update to 1.44.0., guix-commits, 2019/12/15
- 101/265: gnu: r-snpstats: Update to 1.36.0., guix-commits, 2019/12/15
- 92/265: gnu: r-rhdf5lib: Update to 1.8.0., guix-commits, 2019/12/15
- 119/265: gnu: r-msnid: Update to 1.20.0., guix-commits, 2019/12/15
- 126/265: gnu: r-bamsignals: Update to 1.18.0., guix-commits, 2019/12/15
- 129/265: gnu: r-motifrg: Update to 1.30.0., guix-commits, 2019/12/15
- 125/265: gnu: r-rcas: Update to 1.12.0., guix-commits, 2019/12/15
- 134/265: gnu: r-bsgenome: Update to 1.54.0., guix-commits, 2019/12/15
- 143/265: gnu: r-biocparallel: Update to 1.20.0., guix-commits, 2019/12/15
- 147/265: gnu: r-genomicranges: Update to 1.38.0., guix-commits, 2019/12/15
- 144/265: gnu: r-biomart: Update to 2.42.0.,
guix-commits <=
- 151/265: gnu: r-edger: Update to 3.28.0., guix-commits, 2019/12/15
- 150/265: gnu: r-variantannotation: Update to 1.32.0., guix-commits, 2019/12/15
- 152/265: gnu: r-genomeinfodb: Update to 1.22.0., guix-commits, 2019/12/15
- 153/265: gnu: r-iranges: Update to 2.20.1., guix-commits, 2019/12/15
- 155/265: gnu: r-bioccheck: Update to 1.22.0., guix-commits, 2019/12/15
- 166/265: gnu: r-dexseq: Update to 1.32.0., guix-commits, 2019/12/15
- 163/265: gnu: r-gseabase: Update to 1.48.0., guix-commits, 2019/12/15
- 164/265: gnu: r-rbgl: Update to 1.62.1., guix-commits, 2019/12/15
- 167/265: gnu: r-deseq2: Update to 1.26.0., guix-commits, 2019/12/15
- 170/265: gnu: r-htqpcr: Update to 1.40.0., guix-commits, 2019/12/15