53/53: gnu: r-ggm: Move to (gnu packages bioconductor).

[guix-commits]

rekado pushed a commit to branch master
in repository guix.

commit 8017eb0ae8d7fee1669e909b116670da374d0ce3
Author: Ricardo Wurmus <address@hidden>
AuthorDate: Sat Feb 22 14:12:22 2020 +0100

    gnu: r-ggm: Move to (gnu packages bioconductor).
    
    * gnu/packages/cran.scm (r-ggm): Move this variable from here...
    * gnu/packages/bioconductor.scm (r-ggm): ...to here.
---
 gnu/packages/bioconductor.scm | 24 ++++++++++++++++++++++++
 gnu/packages/cran.scm         | 23 -----------------------
 2 files changed, 24 insertions(+), 23 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index a6ee025..9546b46 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1569,6 +1569,30 @@ expressed genes in DNA microarray experiments.")
      "This package implements some simple graph handling capabilities for R.")
     (license license:artistic2.0)))
 
+;; This is a CRAN package, but it depends on a Bioconductor package.
+(define-public r-ggm
+  (package
+    (name "r-ggm")
+    (version "2.5")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (cran-uri "ggm" version))
+       (sha256
+        (base32
+         "11wc6k2kj2ydy0dyks5mbvbhxm1r43id87anl1jg6dn0yv4m78di"))))
+    (properties `((upstream-name . "ggm")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-graph" ,r-graph)
+       ("r-igraph" ,r-igraph)))
+    (home-page "https://cran.r-project.org/package=ggm";)
+    (synopsis "Functions for graphical Markov models")
+    (description
+     "This package provides functions and datasets for maximum likelihood
+fitting of some classes of graphical Markov models.")
+    (license license:gpl2+)))
+
 (define-public r-codedepends
   (package
     (name "r-codedepends")
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index f8eb99d..60947c5 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -19965,29 +19965,6 @@ uses a trans-dimensional @dfn{Markov Chain Monte 
Carlo} (MCMC) approach based
 on a continuous-time birth-death process.")
     (license license:gpl2+)))
 
-(define-public r-ggm
-  (package
-    (name "r-ggm")
-    (version "2.5")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (cran-uri "ggm" version))
-       (sha256
-        (base32
-         "11wc6k2kj2ydy0dyks5mbvbhxm1r43id87anl1jg6dn0yv4m78di"))))
-    (properties `((upstream-name . "ggm")))
-    (build-system r-build-system)
-    (propagated-inputs
-     `(("r-graph" ,r-graph)
-       ("r-igraph" ,r-igraph)))
-    (home-page "https://cran.r-project.org/package=ggm";)
-    (synopsis "Functions for graphical Markov models")
-    (description
-     "This package provides functions and datasets for maximum likelihood
-fitting of some classes of graphical Markov models.")
-    (license license:gpl2+)))
-
 (define-public r-d3network
   (package
     (name "r-d3network")