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02/08: gnu: Remove python-loompy-for-pigx-scrnaseq.
From: |
guix-commits |
Subject: |
02/08: gnu: Remove python-loompy-for-pigx-scrnaseq. |
Date: |
Wed, 26 Feb 2020 04:13:09 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 59c5f85d06c9e540477270b035431de7825e32b0
Author: Ricardo Wurmus <address@hidden>
AuthorDate: Wed Feb 26 08:59:11 2020 +0100
gnu: Remove python-loompy-for-pigx-scrnaseq.
* gnu/packages/bioinformatics.scm (python-loompy-for-pigx-scrnaseq): Remove
variable.
---
gnu/packages/bioinformatics.scm | 17 -----------------
1 file changed, 17 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index e64842b..97d766b 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -12010,23 +12010,6 @@ graphs. This library makes it easy to work with
@file{.loom} files for
single-cell RNA-seq data.")
(license license:bsd-3)))
-;; pigx-scrnaseq does not work with the latest version of loompy.
-(define-public python-loompy-for-pigx-scrnaseq
- (package (inherit python-loompy)
- (name "python-loompy")
- (version "2.0.3")
- (source (origin
- (method git-fetch)
- (uri (git-reference
- (url "https://github.com/linnarsson-lab/loompy.git")
- (commit (string-append "v" version))))
- (file-name (git-file-name name version))
- (sha256
- (base32
- "0pjyl532pl8sbv71yci6h0agchn0naw2qjcwj50n6afrsahbsag3"))))
- ;; There are none.
- (arguments '(#:tests? #f))))
-
;; We cannot use the latest commit because it requires Java 9.
(define-public java-forester
(let ((commit "86b07efe302d5094b42deed9260f719a4c4ac2e6")
- branch master updated (290b55c -> 849f6bc), guix-commits, 2020/02/26
- 02/08: gnu: Remove python-loompy-for-pigx-scrnaseq.,
guix-commits <=
- 01/08: gnu: pigx-scrnaseq: Update to 1.1.3., guix-commits, 2020/02/26
- 06/08: gnu: Add r-loo., guix-commits, 2020/02/26
- 05/08: gnu: Add r-rstantools., guix-commits, 2020/02/26
- 08/08: gnu: Add r-rstanarm., guix-commits, 2020/02/26
- 04/08: gnu: Add r-shinystan., guix-commits, 2020/02/26
- 03/08: gnu: Add r-dygraphs., guix-commits, 2020/02/26
- 07/08: gnu: Add r-rstan., guix-commits, 2020/02/26