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01/03: gnu: crossmap: Update to 0.3.8.
From: |
guix-commits |
Subject: |
01/03: gnu: crossmap: Update to 0.3.8. |
Date: |
Wed, 26 Feb 2020 08:07:40 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit b38dd34f40ff9a779f9e8faf2c8d3739b6d6270f
Author: Ricardo Wurmus <address@hidden>
AuthorDate: Wed Feb 26 13:14:57 2020 +0100
gnu: crossmap: Update to 0.3.8.
* gnu/packages/bioinformatics.scm (crossmap): Update to 0.3.8.
[arguments]: Remove to build with default Python.
[inputs]: Add python-pybigwig; replace python2-bx-python, python2-numpy, and
python2-pysam with their Python 3 variants.
[native-inputs]: Replace python2-cython and python2-nose with their Python 3
variants.
---
gnu/packages/bioinformatics.scm | 16 ++++++++--------
1 file changed, 8 insertions(+), 8 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 7f2a852..1f17c01 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -2272,23 +2272,23 @@ time.")
(define-public crossmap
(package
(name "crossmap")
- (version "0.2.9")
+ (version "0.3.8")
(source (origin
(method url-fetch)
(uri (pypi-uri "CrossMap" version))
(sha256
(base32
- "1byhclrqnqpvc1rqkfh4jwj6yhn0x9y7jk47i0qcjlhk0pjkw92p"))))
+ "1sb2f2qbxya4fzw3yjl09vbrs8vfmw22zrygrvz004sf9gb1vkan"))))
(build-system python-build-system)
- (arguments `(#:python ,python-2))
(inputs
- `(("python-bx-python" ,python2-bx-python)
- ("python-numpy" ,python2-numpy)
- ("python-pysam" ,python2-pysam)
+ `(("python-bx-python" ,python-bx-python)
+ ("python-numpy" ,python-numpy)
+ ("python-pybigwig" ,python-pybigwig)
+ ("python-pysam" ,python-pysam)
("zlib" ,zlib)))
(native-inputs
- `(("python-cython" ,python2-cython)
- ("python-nose" ,python2-nose)))
+ `(("python-cython" ,python-cython)
+ ("python-nose" ,python-nose)))
(home-page "http://crossmap.sourceforge.net/")
(synopsis "Convert genome coordinates between assemblies")
(description