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02/02: gnu: gess: Use WRAP-SCRIPT.
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guix-commits |
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Subject: |
02/02: gnu: gess: Use WRAP-SCRIPT. |
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Date: |
Tue, 3 Mar 2020 05:34:08 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 4d5d07f75cc4ff1b1eb27837671d5c2553e8a3d8
Author: Ricardo Wurmus <address@hidden>
AuthorDate: Tue Mar 3 11:32:47 2020 +0100
gnu: gess: Use WRAP-SCRIPT.
* gnu/packages/bioinformatics.scm (gess)[arguments]: Use WRAP-SCRIPT.
[inputs]: Add guile-3.0 for wrapper.
---
gnu/packages/bioinformatics.scm | 5 +++--
1 file changed, 3 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index b1913dc..0c12e7c 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -11089,7 +11089,7 @@ import matplotlib
matplotlib.use('Agg')
" line)))
;; Make sure GESS has all modules in its path
- (wrap-program (string-append target "GESS.py")
+ (wrap-script (string-append target "GESS.py")
`("PYTHONPATH" ":" = (,target ,(getenv "PYTHONPATH"))))
(mkdir-p bin)
(symlink (string-append target "GESS.py")
@@ -11101,7 +11101,8 @@ matplotlib.use('Agg')
("python2-scipy" ,python2-scipy)
("python2-numpy" ,python2-numpy)
("python2-networkx" ,python2-networkx)
- ("python2-biopython" ,python2-biopython)))
+ ("python2-biopython" ,python2-biopython)
+ ("guile" ,guile-3.0))) ; for the script wrapper
(home-page "https://compbio.uthscsa.edu/GESS_Web/";)
(synopsis "Detect exon-skipping events from raw RNA-seq data")
(description