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branch staging updated (e32aea5 -> b6f946f)


From: guix-commits
Subject: branch staging updated (e32aea5 -> b6f946f)
Date: Thu, 5 Mar 2020 18:26:51 -0500 (EST)

mbakke pushed a change to branch staging
in repository guix.

    from e32aea5  Merge branch 'master' into staging
     add f19d0b1  gnu: emacs-amx: Update to 3.3.
     add 33aa372  gnu: Add abseil-cpp.
     add 74c65c9  gnu: Add gpsd.
     add 6f501b7  gnu: r-ggformula: Update to 0.9.4.
     add 8e19a9a  gnu: r-emmeans: Update to 1.4.5.
     add f4c105d  gnu: r-compositions: Update to 1.40-4.
     add 3afdf6e  gnu: r-spacyr: Update to 1.2.1.
     add d7d8af8  gnu: r-erm: Update to 1.0-1.
     add d797d24  gnu: r-foreign: Update to 0.8-76.
     add 555f227  gnu: r-nlme: Update to 3.1-145.
     add 6f6c737  gnu: r-plyr: Update to 1.8.6.
     add 39d93ce  gnu: ddrescue: Update to 1.25.
     add c8abbe1  import: pypi: Add more licenses
     add 16c896e  gnu: python-pytest-django: Use HTTPS home page.
     add 7509f34  gnu: python-pyyaml: Update home page.
     add 58d4e94  gnu: python-pbr: Update home page.
     add b07e73a  gnu: python-zope-exceptions: Update home page.
     add b5544cb  gnu: python-invoke: Use HTTPS home page.
     add 8f55136  gnu: meld: Update to 3.20.2.
     add 8b5185c  gnu: zathura-djvu: Update to 0.2.9.
     add c0ba023  gnu: weasyprint: Update to 51.
     add 01ebd86  gnu: zathura: Update to 0.4.5.
     add 13d8722  gnu: zathura-pdf-poppler: Update to 0.3.0.
     add 8863477  gnu: girara: Update to 0.3.4.
     add 95858ab  gnu: sg3-utils: Update to 1.45.
     add e884c20  gnu: crispy-doom: Update to 5.7.1.
     add dbc8a6e  gnu: python-pyodbc: Update to 4.0.30.
     add e85af13  gnu: Update pypi.python.org home pages & use HTTPS.
     add 5ba94aa  gnu: ardour: Use HTTPS home page.
     add 9cedae2  gnu: libgee: Update to 0.20.3.
     add 60ce496  gnu: gcc-8: Update to 8.4.0.
     add c1a86b6  gnu: appstream-glib: Update to 0.7.17.
     add 16af0dd  gnu: libsoup: Update to 2.68.4.
     add bd65a4c  gnu: ibus: Update to 1.5.22.
     add e26c4a7  gnu: re2: Update to 2020-03-03.
     add 3f03643  gnu: wpebackend-fdo: Update to 1.4.2.
     add 2f894cb  gnu: enchant: Update to 2.2.8.
     add 0a7aa69  gnu: libgit2: Update to 0.99.0.
     add 7554540  gnu: kodi: Update to 18.6.
     add d3c1e92  gnu: i3-wm: Update to 4.18.
     add c2d7e80  gnu: ceph: Update to 14.2.8.
     add aac148a  gnu: SuiteSparse: Update to 5.7.1.
     add 357328d  gnu: nmoldyn: Upate home page URI.
     add 7f489c5  gnu: domainfinder: Update home page URI.
     add 1ac624c  gnu: pbzip2: Use archived home-page.
     add c5bb55a  gnu: squashfs-tools: Update home page URI.
     add 6656123  gnu: coq-mathcomp: Update home page URI.
     add 85c3a49  gnu: emacs-tldr: Update to 0-1.7203d1b.
     add 69bb61f  gnu: Add guile-xapian.
     add 94aab84  gnu: sbcl-cl-webkit: Update to 20200227.
     add 3046e73  ci: Move 'cross-jobs' procedure to the top level.
     add 5a675b2  guix build: Allow non-package objects in manifest.
     add d37b5a1  weather: Allow non-package objects in manifest.
     add dd1ee16  tests: "make check-system" no longer interns source upfront.
     add c5a3d8f  tests: "make check-system" includes the current commit ID, if 
any.
     add f42f39a  guix build: Parameterize '%graft?' upfront.
     add e767168  weather: Parameterize '%graft?' upfront.
     add c0b726c  tests: Add <system-test> gexp compiler.
     add 5ec4156  tests: Add a manifest for system tests.
     add a1797f3  gnu: Add libraqm.
     add 67c5250  gnu: libraqm: Parametrize version.
     add 5d0f33c  gnu: Add emacs-ddskk.
     add 24ce642  gnu: python-h5py: Update to 2.10.0.
     add 241409c  gnu: Add python-numcodecs.
     add 8e04b23  gnu: Add python-asciitree.
     add 7032c1c  gnu: Add python-zarr.
     add a098b34  gnu: python-anndata: Update to 0.7.1.
     add 2c2b1ef  gnu: java-openjfx-build: Add snippet.
     add 91ba90c  tests: 'run-basic-test' can enter a root password.
     add 5ce84b1  installer: Use a Guile-Newt snapshot that supports 
'form-watch-fd'.
     add 63b8c08  installer: Implement a dialog on /var/guix/installer-socket.
     add f901f5d  installer: Bypass connectivity check when 
/tmp/installer-assume-online exists.
     add 8a4b11c  installer: Run commands without hopping through the shell.
     add e458726  installer: Honor /tmp/installer-system-init-options.
     add ccb1a8c  tests: install: Add "gui-installed-os".
     add 64704be  installer: Fix cow-store umount.
     add e666a92  tests: install: Add %test-gui-installed-os-encrypted.
     add 530e31b  hydra: Remove uses of _IOLBF.
     add bc8b2ff  ci: Adjust 'channel-build-system' for when the source is a 
file name.
     new b6f946f  Merge branch 'master' into staging

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "add" were already present in the repository and have only
been added to this reference.


Summary of changes:
 Makefile.am                                        |   8 +-
 build-aux/hydra/gnu-system.scm                     |   4 +-
 build-aux/hydra/guix-modular.scm                   |   4 +-
 build-aux/run-system-tests.scm                     | 115 ----
 etc/system-tests.scm                               |  94 ++++
 gnu/ci.scm                                         | 125 +++--
 gnu/installer.scm                                  |  21 +
 gnu/installer/final.scm                            |  98 +++-
 gnu/installer/newt/final.scm                       |  40 +-
 gnu/installer/newt/network.scm                     |  10 +-
 gnu/installer/newt/page.scm                        | 587 ++++++++++++++-------
 gnu/installer/newt/partition.scm                   |   8 +-
 gnu/installer/newt/user.scm                        |  64 ++-
 gnu/installer/newt/welcome.scm                     |  44 +-
 gnu/installer/steps.scm                            |  25 +-
 gnu/installer/tests.scm                            | 340 ++++++++++++
 gnu/installer/utils.scm                            | 158 ++++--
 gnu/local.mk                                       |   8 +-
 gnu/packages/audio.scm                             |   2 +-
 gnu/packages/check.scm                             |   6 +-
 gnu/packages/chemistry.scm                         |   5 +-
 gnu/packages/compression.scm                       |   6 +-
 gnu/packages/coq.scm                               |   3 +-
 gnu/packages/cpp.scm                               |  45 ++
 gnu/packages/cran.scm                              |  29 +-
 gnu/packages/databases.scm                         |   4 +-
 gnu/packages/disk.scm                              |   6 +-
 gnu/packages/django.scm                            |   2 +-
 gnu/packages/emacs-xyz.scm                         |  82 ++-
 gnu/packages/enchant.scm                           |   4 +-
 gnu/packages/fontutils.scm                         |  38 +-
 gnu/packages/games.scm                             |   4 +-
 gnu/packages/gcc.scm                               |   6 +-
 gnu/packages/glib.scm                              |   7 +-
 gnu/packages/gnome.scm                             |   8 +-
 gnu/packages/gps.scm                               |  96 +++-
 gnu/packages/graph.scm                             |   2 +-
 gnu/packages/graphviz.scm                          |   2 +-
 gnu/packages/gtk.scm                               |   6 +-
 gnu/packages/guile-xyz.scm                         |  50 +-
 gnu/packages/ibus.scm                              |   4 +-
 gnu/packages/java.scm                              |   6 +
 gnu/packages/kodi.scm                              |   4 +-
 gnu/packages/lisp-xyz.scm                          |   8 +-
 gnu/packages/maths.scm                             |  26 +-
 gnu/packages/patches/appstream-glib-2020.patch     |  31 --
 gnu/packages/patches/ceph-boost-compat.patch       |  81 ---
 .../patches/ceph-volume-respect-PATH.patch         |  22 -
 gnu/packages/patches/libgit2-avoid-python.patch    | 322 -----------
 .../patches/suitesparse-mongoose-cmake.patch       |  27 +
 gnu/packages/patchutils.scm                        |   6 +-
 gnu/packages/pdf.scm                               |  22 +-
 gnu/packages/python-web.scm                        |  22 +-
 gnu/packages/python-xyz.scm                        | 158 +++++-
 gnu/packages/regex.scm                             |   4 +-
 gnu/packages/scsi.scm                              |   6 +-
 gnu/packages/statistics.scm                        |  12 +-
 gnu/packages/storage.scm                           |   8 +-
 gnu/packages/version-control.scm                   |  44 +-
 gnu/packages/webkit.scm                            |   4 +-
 gnu/packages/wm.scm                                |   4 +-
 gnu/tests.scm                                      |   8 +-
 gnu/tests/base.scm                                 |  23 +-
 gnu/tests/install.scm                              | 204 ++++++-
 guix/import/pypi.scm                               |   7 +-
 guix/scripts/build.scm                             |  24 +-
 guix/scripts/weather.scm                           |  41 +-
 tests/guix-build.sh                                |  13 +-
 68 files changed, 2140 insertions(+), 1167 deletions(-)
 delete mode 100644 build-aux/run-system-tests.scm
 create mode 100644 etc/system-tests.scm
 create mode 100644 gnu/installer/tests.scm
 delete mode 100644 gnu/packages/patches/appstream-glib-2020.patch
 delete mode 100644 gnu/packages/patches/ceph-boost-compat.patch
 delete mode 100644 gnu/packages/patches/ceph-volume-respect-PATH.patch
 delete mode 100644 gnu/packages/patches/libgit2-avoid-python.patch
 create mode 100644 gnu/packages/patches/suitesparse-mongoose-cmake.patch



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