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250/296: gnu: r-cytoml: Update to 2.0.0.
From: |
guix-commits |
Subject: |
250/296: gnu: r-cytoml: Update to 2.0.0. |
Date: |
Fri, 12 Jun 2020 19:30:42 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 8d5a83b7c635636bb70a7ae260ffb47d1628b340
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Sat Jun 13 01:01:58 2020 +0200
gnu: r-cytoml: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-cytoml): Update to 2.0.0.
[propagated-inputs]: Remove r-ncdfflow; add r-rcpparmadillo, r-rhdf5lib, and
r-tibble.
---
gnu/packages/bioconductor.scm | 8 +++++---
1 file changed, 5 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 596fdad..43e30f8 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -6248,14 +6248,14 @@ sequential way to mimic the manual gating strategy.")
(define-public r-cytoml
(package
(name "r-cytoml")
- (version "1.12.1")
+ (version "2.0.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "CytoML" version))
(sha256
(base32
- "0wgi8rwb4spxzd5xvs5amfr5g82ny2nad57j3nmhnhnj1cpirjxz"))))
+ "0zpq2j4y9i5lls1kj2w4spl8qjp3076idsr2a2rjvy1fykzlp01q"))))
(properties `((upstream-name . "CytoML")))
(build-system r-build-system)
(inputs
@@ -6274,15 +6274,17 @@ sequential way to mimic the manual gating strategy.")
("r-graph" ,r-graph)
("r-jsonlite" ,r-jsonlite)
("r-lattice" ,r-lattice)
- ("r-ncdfflow" ,r-ncdfflow)
("r-opencyto" ,r-opencyto)
("r-plyr" ,r-plyr)
("r-rbgl" ,r-rbgl)
("r-rcpp" ,r-rcpp)
+ ("r-rcpparmadillo" ,r-rcpparmadillo)
("r-rcppparallel" ,r-rcppparallel)
("r-rgraphviz" ,r-rgraphviz)
+ ("r-rhdf5lib" ,r-rhdf5lib)
("r-rprotobuflib" ,r-rprotobuflib)
("r-runit" ,r-runit)
+ ("r-tibble" ,r-tibble)
("r-xml" ,r-xml)
("r-yaml" ,r-yaml)))
(native-inputs
- 233/296: gnu: r-ropls: Update to 1.20.0., (continued)
- 233/296: gnu: r-ropls: Update to 1.20.0., guix-commits, 2020/06/12
- 234/296: gnu: r-biosigner: Update to 1.16.0., guix-commits, 2020/06/12
- 238/296: gnu: r-consensusclusterplus: Update to 1.52.0., guix-commits, 2020/06/12
- 118/296: gnu: r-oligo: Update to 1.52.0., guix-commits, 2020/06/12
- 144/296: gnu: r-destiny: Update to 3.2.0., guix-commits, 2020/06/12
- 235/296: gnu: r-annotatr: Update to 1.14.0., guix-commits, 2020/06/12
- 240/296: gnu: r-flowcore: Update to 2.0.1., guix-commits, 2020/06/12
- 243/296: gnu: r-ggcyto: Update to 1.16.0., guix-commits, 2020/06/12
- 244/296: gnu: r-flowviz: Update to 1.52.0., guix-commits, 2020/06/12
- 245/296: gnu: r-flowclust: Update to 3.26.0., guix-commits, 2020/06/12
- 250/296: gnu: r-cytoml: Update to 2.0.0.,
guix-commits <=
- 253/296: gnu: r-depecher: Update to 1.4.0., guix-commits, 2020/06/12
- 256/296: gnu: r-genie3: Update to 1.10.0., guix-commits, 2020/06/12
- 257/296: gnu: r-roc: Update to 1.64.0., guix-commits, 2020/06/12
- 201/296: gnu: r-ebimage: Update to 4.30.0., guix-commits, 2020/06/12
- 221/296: gnu: r-progeny: Update to 1.10.0., guix-commits, 2020/06/12
- 222/296: gnu: r-arrmnormalization: Update to 1.28.0., guix-commits, 2020/06/12
- 228/296: gnu: r-quasr: Update to 1.28.0., guix-commits, 2020/06/12
- 246/296: gnu: r-rprotobuflib: Update to 2.0.0., guix-commits, 2020/06/12
- 248/296: gnu: r-flowstats: Update to 4.0.0., guix-commits, 2020/06/12
- 249/296: gnu: r-opencyto: Update to 2.0.0., guix-commits, 2020/06/12