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11/14: gnu: Add python-tifffile.
From: |
guix-commits |
Subject: |
11/14: gnu: Add python-tifffile. |
Date: |
Tue, 23 Jun 2020 17:30:25 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 09f527827a544f8ea3f1b7d0326d4febffdbaf4b
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Tue Jun 23 18:02:31 2020 +0200
gnu: Add python-tifffile.
* gnu/packages/python-xyz.scm (python-tifffile): New variable.
---
gnu/packages/python-xyz.scm | 26 ++++++++++++++++++++++++++
1 file changed, 26 insertions(+)
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm
index 9ab3323..a728494 100644
--- a/gnu/packages/python-xyz.scm
+++ b/gnu/packages/python-xyz.scm
@@ -5342,6 +5342,32 @@ ImageJ ROIs, an undocumented and ImageJ application
specific format to store
regions of interest, geometric shapes, paths, text, etc for image overlays.")
(license license:bsd-3)))
+(define-public python-tifffile
+ (package
+ (name "python-tifffile")
+ (version "2020.6.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "tifffile" version))
+ (sha256
+ (base32
+ "0xv3ynkbrsibqvx7250075idb7wm3canjd6lx2nzf3cbp6l07577"))))
+ (build-system python-build-system)
+ ;; Tests require lfdfiles, which depends on tifffile
+ (arguments `(#:tests? #f))
+ (propagated-inputs
+ `(("python-numpy" ,python-numpy)
+ ;;("python-lfdfiles" ,python-lfdfiles)
+ ("python-roifile" ,python-roifile)))
+ (home-page "https://www.lfd.uci.edu/~gohlke/")
+ (synopsis "Read and write TIFF(r) files")
+ (description "This package lets you read image and metadata from many
+bio-scientific formats such as plain TIFF, BigTIFF, OME-TIFF, STK, LSM, SGI,
+NIH, ImageJ, MicroManager, MD GEL, and FluoView files. It also lets you write
+numpy arrays to TIFF, BigTIFF, and ImageJ hyperstack compatible files.")
+ (license license:bsd-3)))
+
(define-public python-pycparser
(package
(name "python-pycparser")
- 06/14: gnu: Add python-progressbar2., (continued)
- 06/14: gnu: Add python-progressbar2., guix-commits, 2020/06/23
- 08/14: gnu: python-scikit-image: Update to 0.17.2., guix-commits, 2020/06/23
- 07/14: gnu: python-gridmap: Update to 0.14.0., guix-commits, 2020/06/23
- 09/14: gnu: Add python-msgpack-numpy., guix-commits, 2020/06/23
- 12/14: gnu: Add python-lfdfiles., guix-commits, 2020/06/23
- 10/14: gnu: Add python-roifile., guix-commits, 2020/06/23
- 14/14: gnu: python-pywavelets: Update to 1.1.1., guix-commits, 2020/06/23
- 04/14: gnu: python-pyflakes: Update to 2.2.0., guix-commits, 2020/06/23
- 05/14: gnu: python-pycodestyle: Update to 2.6.0., guix-commits, 2020/06/23
- 13/14: gnu: Add python-imageio., guix-commits, 2020/06/23
- 11/14: gnu: Add python-tifffile.,
guix-commits <=