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35/288: gnu: r-glimma: Update to 2.0.0.
From: |
guix-commits |
Subject: |
35/288: gnu: r-glimma: Update to 2.0.0. |
Date: |
Mon, 16 Nov 2020 15:06:45 -0500 (EST) |
rekado pushed a commit to branch wip-r
in repository guix.
commit 6040997e62ffe56f5b8e0ec40cd460eaaa4d1342
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri Oct 30 15:48:42 2020 +0100
gnu: r-glimma: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-glimma): Update to 2.0.0.
---
gnu/packages/bioconductor.scm | 12 ++++++++----
1 file changed, 8 insertions(+), 4 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 066ba73..ee31f71 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2220,20 +2220,24 @@ defined categories which are over/under represented in
RNA-seq data.")
(define-public r-glimma
(package
(name "r-glimma")
- (version "1.16.0")
+ (version "2.0.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "Glimma" version))
(sha256
(base32
- "1bxfgwjqb9p400a5a5q6p17kcnl3ddz090llihkfih9kyxii9n4y"))))
+ "0gy30v30lw27frhmw39pzacqzrv2vwj5rsp6gb3yifllrahdiffv"))))
(properties `((upstream-name . "Glimma")))
(build-system r-build-system)
(propagated-inputs
- `(("r-edger" ,r-edger)
+ `(("r-deseq2" ,r-deseq2)
+ ("r-edger" ,r-edger)
+ ("r-htmlwidgets" ,r-htmlwidgets)
("r-jsonlite" ,r-jsonlite)
- ("r-s4vectors" ,r-s4vectors)))
+ ("r-limma" ,r-limma)
+ ("r-s4vectors" ,r-s4vectors)
+ ("r-summarizedexperiment" ,r-summarizedexperiment)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/Shians/Glimma")
- 17/288: gnu: r-oligo: Update to 1.54.0., (continued)
- 17/288: gnu: r-oligo: Update to 1.54.0., guix-commits, 2020/11/16
- 18/288: gnu: r-qvalue: Update to 2.22.0., guix-commits, 2020/11/16
- 19/288: gnu: r-diffbind: Update to 3.0.0., guix-commits, 2020/11/16
- 23/288: gnu: r-marray: Update to 1.68.0., guix-commits, 2020/11/16
- 24/288: gnu: r-cghbase: Update to 1.50.0., guix-commits, 2020/11/16
- 26/288: gnu: r-qdnaseq: Update to 1.26.0., guix-commits, 2020/11/16
- 28/288: gnu: r-chipcomp: Update to 1.20.0., guix-commits, 2020/11/16
- 30/288: gnu: r-riboseqr: Update to 1.24.0., guix-commits, 2020/11/16
- 36/288: gnu: r-rots: Update to 1.18.0., guix-commits, 2020/11/16
- 33/288: gnu: r-ctc: Update to 1.64.0., guix-commits, 2020/11/16
- 35/288: gnu: r-glimma: Update to 2.0.0.,
guix-commits <=
- 31/288: gnu: r-interactionset: Update to 1.18.0., guix-commits, 2020/11/16
- 37/288: gnu: r-plgem: Update to 1.62.0., guix-commits, 2020/11/16
- 38/288: gnu: r-inspect: Update to 1.20.0., guix-commits, 2020/11/16
- 39/288: gnu: r-dnabarcodes: Update to 1.20.0., guix-commits, 2020/11/16
- 40/288: gnu: r-ruvseq: Update to 1.24.0., guix-commits, 2020/11/16
- 41/288: gnu: r-biocneighbors: Update to 1.8.0., guix-commits, 2020/11/16
- 42/288: gnu: r-biocsingular: Update to 1.6.0., guix-commits, 2020/11/16
- 43/288: gnu: r-destiny: Update to 3.4.0., guix-commits, 2020/11/16
- 60/288: gnu: r-siggenes: Update to 1.64.0., guix-commits, 2020/11/16
- 49/288: gnu: r-karyoploter: Update to 1.16.0., guix-commits, 2020/11/16