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branch wip-r created (now 1f4ed32)
From: |
guix-commits |
Subject: |
branch wip-r created (now 1f4ed32) |
Date: |
Thu, 19 Nov 2020 10:21:14 -0500 (EST) |
rekado pushed a change to branch wip-r
in repository guix.
at 1f4ed32 gnu: r-sushi: Update to 1.28.0.
This branch includes the following new commits:
new 90d06be gnu: r-ideoviz: Update to 1.26.0.
new 086a126 gnu: r-coverageview: Update to 1.28.0.
new 73bbcfd gnu: r-cummerbund: Update to 2.32.0.
new 1df4bae gnu: r-biocversion: Update to 3.12.0.
new c9f21a7 gnu: r-biocgenerics: Update to 0.36.0.
new 94745c0 gnu: r-affycomp: Update to 1.66.0.
new b0be735 gnu: r-affycompatible: Update to 1.50.0.
new 3a177fb gnu: r-affycontam: Update to 1.48.0.
new 6465c1f gnu: r-affycoretools: Update to 1.62.0.
new e65585a gnu: r-affxparser: Update to 1.62.0.
new eeaa50e gnu: r-annotate: Update to 1.68.0.
new 186ac30 gnu: r-hpar: Update to 1.32.0.
new 8183ef4 gnu: r-regioner: Update to 1.22.0.
new 42bd1c4 gnu: r-reportingtools: Update to 2.30.0.
new 2b027ac gnu: r-geneplotter: Update to 1.68.0.
new b604ac6 gnu: r-oligoclasses: Update to 1.52.0.
new f43639d gnu: r-oligo: Update to 1.54.0.
new 07ddb6a gnu: r-qvalue: Update to 2.22.0.
new ae652d7 gnu: r-diffbind: Update to 3.0.0.
new 088aeda gnu: r-multtest: Update to 2.46.0.
new dd1104f gnu: r-graph: Update to 1.68.0.
new 1cd3334 gnu: r-chippeakanno: Update to 3.24.0.
new 61f64f4 gnu: r-marray: Update to 1.68.0.
new 9066db9 gnu: r-cghbase: Update to 1.50.0.
new 1fd579b gnu: r-cghcall: Update to 2.52.0.
new 6696a84 gnu: r-qdnaseq: Update to 1.26.0.
new 847d431 gnu: r-bayseq: Update to 2.24.0.
new 95d5f53 gnu: r-chipcomp: Update to 1.20.0.
new b86b625 gnu: r-riboprofiling: Update to 1.20.0.
new d133d7a gnu: r-riboseqr: Update to 1.24.0.
new 5e576b9 gnu: r-interactionset: Update to 1.18.0.
new 60ae4a0 gnu: r-genomicinteractions: Update to 1.24.0.
new 16bb22a gnu: r-ctc: Update to 1.64.0.
new 524c309 gnu: r-goseq: Update to 1.42.0.
new 0d59ccd gnu: r-glimma: Update to 2.0.0.
new b287c3c gnu: r-rots: Update to 1.18.0.
new 27601ba gnu: r-plgem: Update to 1.62.0.
new 33a0408 gnu: r-inspect: Update to 1.20.0.
new 6c25971 gnu: r-dnabarcodes: Update to 1.20.0.
new 22ddcb1 gnu: r-ruvseq: Update to 1.24.0.
new 295c96d gnu: r-biocneighbors: Update to 1.8.0.
new 5b68be7 gnu: r-biocsingular: Update to 1.6.0.
new ac888d1 gnu: r-destiny: Update to 3.4.0.
new 5125c92 gnu: r-savr: Update to 1.28.0.
new 8b3e757 gnu: r-chipexoqual: Update to 1.14.0.
new 3e23951 gnu: r-copynumber: Update to 1.30.0.
new 751136f gnu: r-dnacopy: Update to 1.64.0.
new 7ffa83b gnu: r-ebseq: Update to 1.30.0.
new e06da79 gnu: r-karyoploter: Update to 1.16.0.
new 533131e gnu: r-lpsymphony: Update to 1.18.0.
new ef5dfcb gnu: r-ihw: Update to 1.18.0.
new 4b8b0ed gnu: r-icobra: Update to 1.18.0.
new 7299356 gnu: r-mast: Update to 1.16.0.
new e7be146 gnu: r-monocle: Update to 2.18.0.
new 8f08989 gnu: r-noiseq: Update to 2.34.0.
new 9ed9297 gnu: r-scdd: Update to 1.14.0.
new 9ac0bd0 gnu: r-scone: Update to 1.14.0.
new b8a0c31 gnu: r-geoquery: Update to 2.58.0.
new 182fe51 gnu: r-illuminaio: Update to 0.32.0.
new d8433e1 gnu: r-siggenes: Update to 1.64.0.
new b031325 gnu: r-bumphunter: Update to 1.32.0.
new 9028ab6 gnu: r-minfi: Update to 1.36.0.
new 5aa99d1 gnu: r-methylumi: Update to 2.36.0.
new 6dfdcc0 gnu: r-lumi: Update to 2.42.0.
new a2b28ba gnu: r-linnorm: Update to 2.14.0.
new 1fce5b8 gnu: r-ioniser: Update to 2.14.0.
new 8345099 gnu: r-varianttools: Update to 1.32.0.
new f994afc gnu: r-heatplus: Update to 2.36.0.
new 993f900 gnu: r-gosemsim: Update to 2.16.0.
new b99a762 gnu: r-anota: Update to 1.38.0.
new 22f8c85 gnu: r-sigpathway: Update to 1.58.0.
new cef2320 gnu: r-fgsea: Update to 1.16.0.
new cecfcdd gnu: r-dose: Update to 3.16.0.
new 1b61cc1 gnu: r-enrichplot: Update to 1.10.0.
new 13c40b5 gnu: r-clusterprofiler: Update to 3.18.0.
new 115f27a gnu: r-mlinterfaces: Update to 1.70.0.
new 6423166 gnu: r-a4core: Update to 1.38.0.
new dd8129b gnu: r-a4classif: Update to 1.38.0.
new 5389c61 gnu: r-a4preproc: Update to 1.38.0.
new 642d71f gnu: r-a4reporting: Update to 1.38.0.
new 806161f gnu: r-a4base: Update to 1.38.0.
new e8ee05a gnu: r-a4: Update to 1.38.0.
new 3d79381 gnu: r-abseqr: Update to 1.8.0.
new e7c6ff6 gnu: r-bacon: Update to 1.18.0.
new 5f71f1e gnu: r-rgadem: Update to 2.38.0.
new 45d6b79 gnu: r-motifdb: Update to 1.32.0.
new 8d30638 gnu: r-motifbreakr: Update to 2.4.0.
new a971c63 gnu: r-motifstack: Update to 1.34.0.
new bc782c5 gnu: r-genomicscores: Update to 2.2.0.
new 51c63e9 gnu: r-atacseqqc: Update to 1.14.0.
new 3880e2b gnu: r-gofuncr: Update to 1.10.0.
new 59a1939 gnu: r-abaenrichment: Update to 1.20.0.
new 0869086 gnu: r-annotationfuncs: Update to 1.40.0.
new 60fde7a gnu: r-annotationtools: Update to 1.64.0.
new 5cef7dd gnu: r-allelicimbalance: Update to 1.28.0.
new b6ae6ff gnu: r-aucell: Update to 1.12.0.
new a9c823b gnu: r-ebimage: Update to 4.32.0.
new 16d6403 gnu: r-yamss: Update to 1.16.0.
new d0fe301 gnu: r-gtrellis: Update to 1.22.0.
new 9f11df7 gnu: r-somaticsignatures: Update to 2.26.0.
new 6f02098 gnu: r-yapsa: Update to 1.16.0.
new 0221a8e gnu: r-gcrma: Update to 2.62.0.
new aea3bbb gnu: r-simpleaffy: Update to 2.66.0.
new addc13a gnu: r-yaqcaffy: Update to 1.50.0.
new d8d30c0 gnu: r-quantro: Update to 1.24.0.
new ec668a2 gnu: r-yarn: Update to 1.16.0.
new dba2da8 gnu: r-roar: Update to 1.26.0.
new 8a9d76b gnu: r-xbseq: Update to 1.22.0.
new e389eca gnu: r-massspecwavelet: Update to 1.56.0.
new cc620f2 gnu: r-xcms: Update to 3.12.0.
new 4f865f4 gnu: r-wrench: Update to 1.8.0.
new df28e1c gnu: r-wiggleplotr: Update to 1.14.0.
new 0ddb267 gnu: r-widgettools: Update to 1.68.0.
new 32a99d5 gnu: r-webbioc: Update to 1.62.0.
new 82e3113 gnu: r-zfpkm: Update to 1.12.0.
new 0effb5c gnu: r-rbowtie2: Update to 1.12.0.
new 96166a1 gnu: r-progeny: Update to 1.12.0.
new 92b97e3 gnu: r-arrmnormalization: Update to 1.30.0.
new d9291d1 gnu: r-biocfilecache: Update to 1.14.0.
new b593c71 gnu: r-iclusterplus: Update to 1.26.0.
new 17ad079 gnu: r-rbowtie: Update to 1.30.0.
new 622fdec gnu: r-sgseq: Update to 1.24.0.
new 1629ecd gnu: r-rhisat2: Update to 1.6.0.
new 86f3cb3 gnu: r-quasr: Update to 1.30.0.
new b42644c gnu: r-rqc: Update to 1.24.0.
new e074d3d gnu: r-birewire: Update to 3.22.0.
new 2449ac6 gnu: r-multidataset: Update to 1.18.0.
new 12faa8a gnu: r-ropls: Update to 1.22.0.
new 6d4307b gnu: r-biosigner: Update to 1.18.0.
new 3ce6d2a gnu: r-annotatr: Update to 1.16.0.
new e9f7170 gnu: r-rsubread: Update to 2.4.0.
new fd5f9a7 gnu: r-flowutils: Update to 1.54.0.
new bf169ad gnu: r-consensusclusterplus: Update to 1.54.0.
new 9f19d62 gnu: r-cytolib: Update to 2.2.0.
new 29fbd70 gnu: r-flowcore: Update to 2.2.0.
new 2293e66 gnu: r-flowmeans: Update to 1.50.0.
new ebebd6d gnu: r-ncdfflow: Update to 2.36.0.
new 509331f gnu: r-ggcyto: Update to 1.18.0.
new f1a6433 gnu: r-flowviz: Update to 1.54.0.
new fecfe46 gnu: r-flowclust: Update to 3.28.0.
new b1337a7 gnu: r-rprotobuflib: Update to 2.2.0.
new d5c0c9a gnu: r-flowworkspace: Update to 4.2.0.
new 015efc2 gnu: r-flowstats: Update to 4.2.0.
new c7b4c3c gnu: r-opencyto: Update to 2.2.0.
new 5a335eb gnu: r-cytoml: Update to 2.2.0.
new 3ec1245 gnu: r-flowsom: Update to 1.22.0.
new 8e9c04d gnu: r-mixomics: Update to 6.14.0.
new 81d9b26 gnu: r-depecher: Update to 1.6.0.
new f25e563 gnu: r-rcistarget: Update to 1.10.0.
new e375b15 gnu: r-cicero: Update to 1.8.0.
new 7a81e8a gnu: r-genie3: Update to 1.12.0.
new 115f7b3 gnu: r-roc: Update to 1.66.0.
new f257ecc gnu: r-watermelon: Update to 1.34.0.
new 2c57c8d gnu: r-gdsfmt: Update to 1.26.0.
new c1405d0 gnu: r-bigmelon: Update to 1.16.0.
new 8902ef4 gnu: r-seqbias: Update to 1.38.0.
new 621bc1e gnu: r-reqon: Update to 1.36.0.
new 95f24b6 gnu: r-wavcluster: Update to 2.24.0.
new ec8fad1 gnu: r-timeseriesexperiment: Update to 1.8.0.
new 63209ac gnu: r-variantfiltering: Update to 1.26.0.
new 8461fc9 gnu: r-variancepartition: Update to 1.20.0.
new bf0587b gnu: r-htqpcr: Update to 1.44.0.
new 0fb1e11 gnu: r-unifiedwmwqpcr: Update to 1.26.0.
new d19c591 gnu: r-bgmix: Update to 1.50.0.
new 1e1212a gnu: r-bgx: Update to 1.56.0.
new 061ec74 gnu: r-bhc: Update to 1.42.0.
new 0d63ff3 gnu: r-bicare: Update to 1.48.0.
new d935ece gnu: r-bifet: Update to 1.10.0.
new f3c28ad gnu: r-rsbml: Update to 2.48.0.
new aa368b0 gnu: r-hypergraph: Update to 1.62.0.
new 13d6b5b gnu: r-hyperdraw: Update to 1.42.0.
new 76ee853 gnu: r-biggr: Update to 1.26.0.
new be0969e gnu: r-bigmemoryextras: Update to 1.38.0.
new ed5ec42 gnu: r-bigpint: Update to 1.6.0.
new fd3d2e9 gnu: r-chemminer: Update to 3.42.0.
new b357f22 gnu: r-bioassayr: Update to 1.28.0.
new 0238572 gnu: r-biobroom: Update to 1.22.0.
new 4b9d046 gnu: r-graphite: Update to 1.36.0.
new d74d844 gnu: r-reactomepa: Update to 1.34.0.
new f3235d2 gnu: r-ebarrays: Update to 2.54.0.
new 3821f6f gnu: r-bioccasestudies: Update to 1.52.0.
new 3ea5bc8 gnu: r-biocgraph: Update to 1.52.0.
new c50bb85 gnu: r-experimenthub: Update to 1.16.0.
new ed94820 gnu: r-multiassayexperiment: Update to 1.16.0.
new bf37d9f gnu: r-bioconcotk: Update to 1.10.0.
new fc1ae20 gnu: r-biocor: Update to 1.14.0.
new d8c6eed gnu: r-biocpkgtools: Update to 1.8.0.
new 037a480 gnu: r-biocset: Update to 1.4.0.
new d0978e2 gnu: r-biocworkflowtools: Update to 1.16.0.
new 2b4d0cb gnu: r-biodist: Update to 1.62.0.
new 1e0d38f gnu: r-pcatools: Update to 2.2.0.
new bce92cd gnu: r-rgreat: Update to 1.22.0.
new eef3de3 gnu: r-m3c: Update to 1.12.0.
new 1ee2c97 gnu: r-icens: Update to 1.62.0.
new 8340c1c gnu: r-fourcseq: Update to 1.24.0.
new 87f7fc0 gnu: r-preprocesscore: Update to 1.52.0.
new 9f71118 gnu: r-rgraphviz: Update to 2.34.0.
new f27d343 gnu: r-fithic: Update to 1.16.0.
new 3e6f12d gnu: r-hitc: Update to 1.34.0.
new ddd54b8 gnu: r-hdf5array: Update to 1.18.0.
new 79e5080 gnu: r-rhdf5lib: Update to 1.12.0.
new 1a1e36b gnu: r-beachmat: Update to 2.6.0.
new ba1693f gnu: r-singlecellexperiment: Update to 1.12.0.
new 142ccf1 gnu: r-scater: Update to 1.18.0.
new 4ee0e62 gnu: r-scran: Update to 1.18.0.
new e196c86 gnu: r-delayedmatrixstats: Update to 1.12.0.
new 370396c gnu: r-genefilter: Update to 1.72.0.
new 1354909 gnu: r-deseq2: Update to 1.30.0.
new 7ac0758 gnu: r-dexseq: Update to 1.36.0.
new 452e118 gnu: r-annotationforge: Update to 1.32.0.
new 19c8ec4 gnu: r-rbgl: Update to 1.66.0.
new e7b6988 gnu: r-gseabase: Update to 1.52.0.
new 8aad494 gnu: r-category: Update to 2.56.0.
new 37514a8 gnu: r-gostats: Update to 2.56.0.
new f5b7e22 gnu: r-shortread: Update to 1.48.0.
new 5f8fb38 gnu: r-systempiper: Update to 1.24.0.
new 038a782 gnu: r-grohmm: Update to 1.24.0.
new 75a731f gnu: r-biocviews: Update to 1.58.0.
new d2ace98 gnu: r-biocstyle: Update to 2.18.0.
new 0e2b04c gnu: r-bioccheck: Update to 1.26.0.
new 588a361 gnu: r-s4vectors: Update to 0.28.0.
new 837e752 gnu: r-iranges: Update to 2.24.0.
new 16795b0 gnu: r-genomeinfodb: Update to 1.26.0.
new c6b6e49 gnu: r-edger: Update to 3.32.0.
new e7503fa gnu: r-variantannotation: Update to 1.36.0.
new f8e74a7 gnu: r-limma: Update to 3.46.0.
new b165c46 gnu: r-xvector: Update to 0.30.0.
new 808b243 gnu: r-genomicranges: Update to 1.42.0.
new 42e0c79 gnu: r-biobase: Update to 2.50.0.
new 920b787 gnu: r-annotationdbi: Update to 1.52.0.
new 9ef68be gnu: r-biomart: Update to 2.46.0.
new ad03bb7 gnu: r-biocparallel: Update to 1.24.0.
new ae7f27a gnu: r-biostrings: Update to 2.58.0.
new 0aed77c gnu: r-rsamtools: Update to 2.6.0.
new fa09ee9 gnu: r-delayedarray: Update to 0.16.0.
new 248649c gnu: r-summarizedexperiment: Update to 1.20.0.
new d02cb5a gnu: r-genomicalignments: Update to 1.26.0.
new 0f2c10f gnu: r-rtracklayer: Update to 1.50.0.
new 2a2c6f0 gnu: r-genomicfeatures: Update to 1.42.0.
new 556a036 gnu: r-topgo: Update to 2.41.0.
new 5d1b670 gnu: r-bsgenome: Update to 1.58.0.
new 9e492d9 gnu: r-impute: Update to 1.64.0.
new 319aef6 gnu: r-seqpattern: Update to 1.22.0.
new b1bac3a gnu: r-genomation: Update to 1.22.0.
new f3a8df6 gnu: r-seqlogo: Update to 1.56.0.
new eec879e gnu: r-zlibbioc: Update to 1.36.0.
new e50b058 gnu: r-rhtslib: Update to 1.22.0.
new 4131939 gnu: r-bamsignals: Update to 1.22.0.
new 33289d9 gnu: r-rcas: Update to 1.16.0.
new 551e677 gnu: r-mutationalpatterns: Update to 3.0.0.
new 1244ba2 gnu: r-tximport: Update to 1.18.0.
new 10e4874 gnu: r-rhdf5: Update to 2.34.0.
new 1247314 gnu: r-annotationfilter: Update to 1.14.0.
new 6796cff gnu: r-chipseq: Update to 1.40.0.
new 5a161fb gnu: r-copywriter: Update to 2.22.0.
new 6057e0d gnu: r-methylkit: Update to 1.16.0.
new c1f9e2c gnu: r-sva: Update to 3.38.0.
new d1a56a2 gnu: r-protgenerics: Update to 1.22.0.
new ca99b4d gnu: r-mzr: Update to 2.24.0.
new 8fd0a19 gnu: r-affyio: Update to 1.60.0.
new 4eddd53 gnu: r-affy: Update to 1.68.0.
new 4ba8431 gnu: r-vsn: Update to 3.58.0.
new b7962fc gnu: r-mzid: Update to 1.28.0.
new 994d24b gnu: r-pcamethods: Update to 1.82.0.
new 2ddda74 gnu: r-msnbase: Update to 2.16.0.
new aa74bf3 gnu: r-msnid: Update to 1.24.0.
new b86c7ae gnu: r-aroma-light: Update to 3.20.0.
new f7503bd gnu: r-edaseq: Update to 2.24.0.
new 9190b82 gnu: r-interactivedisplaybase: Update to 1.28.0.
new df9ccdd gnu: r-annotationhub: Update to 2.22.0.
new 8641376 gnu: r-fastseg: Update to 1.36.0.
new 93daa19 gnu: r-keggrest: Update to 1.30.0.
new 2867196 gnu: r-gage: Update to 2.40.0.
new 68e1cb5 gnu: r-genomicfiles: Update to 1.26.0.
new db52252 gnu: r-complexheatmap: Update to 2.6.0.
new cb802cc gnu: r-dirichletmultinomial: Update to 1.32.0.
new 2b49c50 gnu: r-ensembldb: Update to 2.14.0.
new bb7f6de gnu: r-organismdbi: Update to 1.32.0.
new 8864e30 gnu: r-biovizbase: Update to 1.38.0.
new af73cd2 gnu: r-ggbio: Update to 1.38.0.
new 2dcd69e gnu: r-gqtlbase: Update to 1.21.1.
new 10cbb1e gnu: r-snpstats: Update to 1.40.0.
new 57c81ed gnu: r-erma: Update to 1.6.0.
new a64ed46 gnu: r-ldblock: Update to 1.20.0.
new 9164672 gnu: r-gqtlstats: Update to 1.21.3.
new 31f9375 gnu: r-gviz: Update to 1.34.0.
new 7bcb394 gnu: r-gwascat: Update to 2.22.0.
new 1f4ed32 gnu: r-sushi: Update to 1.28.0.
The 288 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "add" were already present in the repository and have only
been added to this reference.
- branch wip-r created (now 1f4ed32),
guix-commits <=
- 02/288: gnu: r-coverageview: Update to 1.28.0., guix-commits, 2020/11/19
- 01/288: gnu: r-ideoviz: Update to 1.26.0., guix-commits, 2020/11/19
- 09/288: gnu: r-affycoretools: Update to 1.62.0., guix-commits, 2020/11/19
- 06/288: gnu: r-affycomp: Update to 1.66.0., guix-commits, 2020/11/19
- 04/288: gnu: r-biocversion: Update to 3.12.0., guix-commits, 2020/11/19
- 12/288: gnu: r-hpar: Update to 1.32.0., guix-commits, 2020/11/19
- 07/288: gnu: r-affycompatible: Update to 1.50.0., guix-commits, 2020/11/19
- 14/288: gnu: r-reportingtools: Update to 2.30.0., guix-commits, 2020/11/19
- 16/288: gnu: r-oligoclasses: Update to 1.52.0., guix-commits, 2020/11/19
- 18/288: gnu: r-qvalue: Update to 2.22.0., guix-commits, 2020/11/19