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27/131: gnu: python-screed: Adjust following Python build system changes
From: |
guix-commits |
Subject: |
27/131: gnu: python-screed: Adjust following Python build system changes. |
Date: |
Mon, 1 Feb 2021 11:56:38 -0500 (EST) |
apteryx pushed a commit to branch core-updates
in repository guix.
commit 3c0b3733104e0a5846138ed7ee25e0c15cfcb28d
Author: Maxim Cournoyer <maxim.cournoyer@gmail.com>
AuthorDate: Fri Jan 22 13:16:52 2021 -0500
gnu: python-screed: Adjust following Python build system changes.
* gnu/packages/bioinformatics.scm (python-screed)[arguments]: Remove field,
no
longer necessary.
---
gnu/packages/bioinformatics.scm | 19 -------------------
1 file changed, 19 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 85aaeb3..9bc2bb8 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -6295,25 +6295,6 @@ complexity samples.")
(base32
"148vcb7w2wr6a4w6vs2bsxanbqibxfk490zbcbg4m61s8669zdjx"))))
(build-system python-build-system)
- (arguments
- '(#:phases
- (modify-phases %standard-phases
- ;; Tests must be run after installation, as the "screed" command does
- ;; not exist right after building.
- (delete 'check)
- (add-after 'install 'check
- (lambda* (#:key inputs outputs #:allow-other-keys)
- (let ((out (assoc-ref outputs "out")))
- (setenv "PYTHONPATH"
- (string-append out "/lib/python"
- (string-take (string-take-right
- (assoc-ref inputs "python")
- 5) 3)
- "/site-packages:"
- (getenv "PYTHONPATH")))
- (setenv "PATH" (string-append out "/bin:" (getenv "PATH"))))
- (invoke "python" "setup.py" "test")
- #t)))))
(native-inputs
`(("python-pytest" ,python-pytest)
("python-pytest-cov" ,python-pytest-cov)
- 23/131: gnu: intel-xed: Adjust build phase., (continued)
- 23/131: gnu: intel-xed: Adjust build phase., guix-commits, 2021/02/01
- 26/131: gnu: bamm: Update following changes to the Python build system., guix-commits, 2021/02/01
- 25/131: gnu: python-pysam: Adjust following Python build system changes., guix-commits, 2021/02/01
- 03/131: build/python: Always add the install prefix to the Guix PYTHONPATH., guix-commits, 2021/02/01
- 02/131: build/python: Replace PYTHONPATH by GUIX_PYTHONPATH., guix-commits, 2021/02/01
- 08/131: gnu: python-fixtures-bootstrap: Do not sanity check., guix-commits, 2021/02/01
- 10/131: gnu: python-pyfakefs: Disable unreliable test, guix-commits, 2021/02/01
- 17/131: gnu: python-automat: Remove broken console script., guix-commits, 2021/02/01
- 14/131: gnu: python-traitlets: Add missing input., guix-commits, 2021/02/01
- 20/131: gnu: python2-packaging-bootstrap: Add missing dependency, guix-commits, 2021/02/01
- 27/131: gnu: python-screed: Adjust following Python build system changes.,
guix-commits <=
- 28/131: gnu: python-scanpy: Do not set PYTHONPATH., guix-commits, 2021/02/01
- 18/131: gnu: python-packaging-bootstrap: Remove dependency., guix-commits, 2021/02/01
- 22/131: gnu: solaar: Do not read PYTHONPATH from environment., guix-commits, 2021/02/01
- 24/131: gnu: python-pybedtools: Streamline following Python build system changes., guix-commits, 2021/02/01
- 33/131: gnu: ganeti: Do not set PYTHONPATH., guix-commits, 2021/02/01
- 37/131: gnu: tensorflow: Do not alter PYTHONPATH., guix-commits, 2021/02/01
- 39/131: gnu: python-rpy2: Do not set PYTHONPATH., guix-commits, 2021/02/01
- 49/131: gnu: python-hyperkitty: Do not set PYTHONPATH., guix-commits, 2021/02/01
- 53/131: gnu: meson-0.55: Update to 0.55.3., guix-commits, 2021/02/01
- 30/131: gnu: python-xmlschema: Do not set PYTHONPATH., guix-commits, 2021/02/01