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02/02: gnu: Add r-rentrez.
From: |
guix-commits |
Subject: |
02/02: gnu: Add r-rentrez. |
Date: |
Thu, 4 Feb 2021 10:35:17 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit f9c0ce7179dd13879d2d868b5c4f047aa4e251c5
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Feb 4 16:34:57 2021 +0100
gnu: Add r-rentrez.
* gnu/packages/cran.scm (r-rentrez): New variable.
---
gnu/packages/cran.scm | 27 +++++++++++++++++++++++++++
1 file changed, 27 insertions(+)
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index b229e0e..00c870a 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -6568,6 +6568,33 @@ user's computer should be used to save data, caches and
logs. It is a port of
Python's @url{https://github.com/ActiveState/appdirs,Appdirs} to R.")
(license license:expat)))
+(define-public r-rentrez
+ (package
+ (name "r-rentrez")
+ (version "1.2.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "rentrez" version))
+ (sha256
+ (base32
+ "0x1g2f6hvkqqlb39z8m5qxhcvsizddic5i7rpqw0wy77xfbna9gv"))))
+ (properties `((upstream-name . "rentrez")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-httr" ,r-httr)
+ ("r-jsonlite" ,r-jsonlite)
+ ("r-xml" ,r-xml)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://docs.ropensci.org/rentrez/")
+ (synopsis "Entrez in R")
+ (description
+ "This package provides an R interface to the NCBI's EUtils API,
+allowing users to search databases like GenBank PubMed, process the results of
+those searches and pull data into their R sessions.")
+ (license license:expat)))
+
(define-public r-renv
(package
(name "r-renv")