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10/96: gnu: Add r-seuratobject.
From: |
guix-commits |
Subject: |
10/96: gnu: Add r-seuratobject. |
Date: |
Wed, 10 Feb 2021 19:06:24 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 213ee6574286eef61b34df0d9b40287ee7152e41
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Feb 11 00:35:38 2021 +0100
gnu: Add r-seuratobject.
* gnu/packages/cran.scm (r-seuratobject): New variable.
---
gnu/packages/cran.scm | 29 +++++++++++++++++++++++++++++
1 file changed, 29 insertions(+)
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 19aafd6..58c6a90 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -25857,6 +25857,35 @@ as allowing spectra with different resolutions.")
data to rasters. It speeds up plotting of data with millions of points.")
(license license:gpl3+)))
+(define-public r-seuratobject
+ (package
+ (name "r-seuratobject")
+ (version "4.0.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "SeuratObject" version))
+ (sha256
+ (base32
+ "03k27z7g76wy7mfja2cpxq183xk0906k9gxb2j6p1zw341gv4gii"))))
+ (properties `((upstream-name . "SeuratObject")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-matrix" ,r-matrix)
+ ("r-rcpp" ,r-rcpp)
+ ("r-rcppeigen" ,r-rcppeigen)
+ ("r-rlang" ,r-rlang)
+ ("r-sctransform" ,r-sctransform)))
+ (home-page "https://satijalab.org/seurat")
+ (synopsis "Data structures for single cell data")
+ (description
+ "This package defines S4 classes for single-cell genomic data and
+associated information, such as dimensionality reduction embeddings,
+nearest-neighbor graphs, and spatially-resolved coordinates. It provides data
+access methods and R-native hooks to ensure the Seurat object is familiar to
+other R users.")
+ (license license:gpl3)))
+
(define-public r-seurat
(package
(name "r-seurat")
- branch master updated (8f8a148 -> 682ff34), guix-commits, 2021/02/10
- 01/96: gnu: r-systemfonts: Update to 1.0.1., guix-commits, 2021/02/10
- 02/96: gnu: Add r-highlight., guix-commits, 2021/02/10
- 03/96: gnu: Add r-clustree., guix-commits, 2021/02/10
- 04/96: gnu: Add r-textshaping., guix-commits, 2021/02/10
- 05/96: gnu: Add r-ragg., guix-commits, 2021/02/10
- 06/96: gnu: Add r-downlit., guix-commits, 2021/02/10
- 08/96: gnu: Add r-cachem., guix-commits, 2021/02/10
- 10/96: gnu: Add r-seuratobject.,
guix-commits <=
- 11/96: gnu: r-stabs: Update to 0.6-4., guix-commits, 2021/02/10
- 14/96: gnu: r-reprex: Update to 1.0.0., guix-commits, 2021/02/10
- 07/96: gnu: Add r-pkgdown., guix-commits, 2021/02/10
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