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101/324: gnu: r-structuralvariantannotation: Update to 1.8.0.
From: |
guix-commits |
Subject: |
101/324: gnu: r-structuralvariantannotation: Update to 1.8.0. |
Date: |
Sat, 5 Jun 2021 03:14:56 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 8c0f2d9e0a68fc323da9ce05a81710344bb36cc8
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Sat Jun 5 08:49:48 2021 +0200
gnu: r-structuralvariantannotation: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to
1.8.0.
[propagated-inputs]: Add r-rlang.
[native-inputs]: Add r-knitr.
---
gnu/packages/bioconductor.scm | 11 +++++++----
1 file changed, 7 insertions(+), 4 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index de7be4c..07f1238 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4220,24 +4220,27 @@ graph construction.")
(define-public r-structuralvariantannotation
(package
(name "r-structuralvariantannotation")
- (version "1.6.0")
+ (version "1.8.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "StructuralVariantAnnotation" version))
(sha256
(base32
- "0ff40703iyf5wk77hbqhphfxnzc2wcshnjhvh66c5l0jvj9z8xvc"))))
+ "10h63h1v87nvm3bfyr6dsjlbmzxf1vks30d0xz6q4hssqq9xlzgv"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-biocgenerics" ,r-biocgenerics)
+ `(("r-assertthat" ,r-assertthat)
+ ("r-biocgenerics" ,r-biocgenerics)
("r-biostrings" ,r-biostrings)
("r-dplyr" ,r-dplyr)
("r-genomicranges" ,r-genomicranges)
+ ("r-rlang" ,r-rlang)
("r-rtracklayer" ,r-rtracklayer)
("r-stringr" ,r-stringr)
- ("r-assertthat" ,r-assertthat)
("r-variantannotation" ,r-variantannotation)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page
"https://bioconductor.org/packages/StructuralVariantAnnotation/")
(synopsis "R package designed to simplify structural variant analysis")
(description
- 79/324: gnu: r-impute: Update to 1.66.0., (continued)
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- 86/324: gnu: r-mzid: Update to 1.30.0., guix-commits, 2021/06/05
- 88/324: gnu: r-pcamethods: Update to 1.84.0., guix-commits, 2021/06/05
- 92/324: gnu: r-regioner: Update to 1.24.0., guix-commits, 2021/06/05
- 74/324: gnu: r-genomicranges: Update to 1.44.0., guix-commits, 2021/06/05
- 76/324: gnu: r-gseabase: Update to 1.54.0., guix-commits, 2021/06/05
- 77/324: gnu: r-hpar: Update to 1.34.0., guix-commits, 2021/06/05
- 81/324: gnu: r-keggrest: Update to 1.32.0., guix-commits, 2021/06/05
- 82/324: gnu: r-limma: Update to 3.48.0., guix-commits, 2021/06/05
- 89/324: gnu: r-protgenerics: Update to 1.24.0., guix-commits, 2021/06/05
- 101/324: gnu: r-structuralvariantannotation: Update to 1.8.0.,
guix-commits <=
- 110/324: gnu: r-zlibbioc: Update to 1.38.0., guix-commits, 2021/06/05
- 116/324: gnu: r-greylistchip: Update to 1.24.0., guix-commits, 2021/06/05
- 123/324: gnu: r-marray: Update to 1.70.0., guix-commits, 2021/06/05
- 118/324: gnu: r-mbkmeans: Update to 1.8.0., guix-commits, 2021/06/05
- 124/324: gnu: r-cghbase: Update to 1.52.0., guix-commits, 2021/06/05
- 128/324: gnu: r-chipcomp: Update to 1.22.0., guix-commits, 2021/06/05
- 131/324: gnu: r-interactionset: Update to 1.20.0., guix-commits, 2021/06/05
- 135/324: gnu: r-glimma: Update to 2.2.0., guix-commits, 2021/06/05
- 39/324: gnu: r-affyio: Update to 1.62.0., guix-commits, 2021/06/05
- 28/324: gnu: r-decipher: Update to 2.20.0., guix-commits, 2021/06/05