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100/324: gnu: r-slingshot: Update to 2.0.0.
From: |
guix-commits |
Subject: |
100/324: gnu: r-slingshot: Update to 2.0.0. |
Date: |
Sat, 5 Jun 2021 03:14:56 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 8e0dac09c4f7afea565e5b4b8f907d0fac148c9e
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Sat Jun 5 08:49:48 2021 +0200
gnu: r-slingshot: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-slingshot): Update to 2.0.0.
[propagated-inputs]: Remove r-ape; add r-s4vectors and r-trajectoryutils.
---
gnu/packages/bioconductor.scm | 11 ++++++-----
1 file changed, 6 insertions(+), 5 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 8a1f3a2..de7be4c 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4188,21 +4188,22 @@ structures to hold pseudotime inference results.")
(define-public r-slingshot
(package
(name "r-slingshot")
- (version "1.8.0")
+ (version "2.0.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "slingshot" version))
(sha256
(base32
- "0sz4frlk7c1g8adyfcgi1mf1xsf9n5zib4bw7j9kl711dbhvkqwl"))))
+ "1aqsz2kxwax8d8d5iv3zk5hlyk5aya1wbxs1wky2rgccw4d35whx"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-ape" ,r-ape)
- ("r-igraph" ,r-igraph)
+ `(("r-igraph" ,r-igraph)
("r-matrixstats" ,r-matrixstats)
("r-princurve" ,r-princurve)
+ ("r-s4vectors" ,r-s4vectors)
("r-singlecellexperiment" ,r-singlecellexperiment)
- ("r-summarizedexperiment" ,r-summarizedexperiment)))
+ ("r-summarizedexperiment" ,r-summarizedexperiment)
+ ("r-trajectoryutils" ,r-trajectoryutils)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/slingshot")
- 120/324: gnu: r-graph: Update to 1.70.0., (continued)
- 120/324: gnu: r-graph: Update to 1.70.0., guix-commits, 2021/06/05
- 126/324: gnu: r-qdnaseq: Update to 1.28.0., guix-commits, 2021/06/05
- 121/324: gnu: r-chippeakanno: Update to 3.26.0., guix-commits, 2021/06/05
- 127/324: gnu: r-bayseq: Update to 2.26.0., guix-commits, 2021/06/05
- 130/324: gnu: r-riboseqr: Update to 1.26.0., guix-commits, 2021/06/05
- 137/324: gnu: r-plgem: Update to 1.64.0., guix-commits, 2021/06/05
- 146/324: gnu: r-dnacopy: Update to 1.66.0., guix-commits, 2021/06/05
- 147/324: gnu: r-ebseq: Update to 1.32.0., guix-commits, 2021/06/05
- 151/324: gnu: r-icobra: Update to 1.20.0., guix-commits, 2021/06/05
- 97/324: gnu: r-seqlogo: Update to 1.58.0., guix-commits, 2021/06/05
- 100/324: gnu: r-slingshot: Update to 2.0.0.,
guix-commits <=
- 102/324: gnu: r-summarizedexperiment: Update to 1.22.0., guix-commits, 2021/06/05
- 108/324: gnu: r-vsn: Update to 3.60.0., guix-commits, 2021/06/05
- 117/324: gnu: r-diffbind: Update to 3.2.1., guix-commits, 2021/06/05
- 125/324: gnu: r-cghcall: Update to 2.54.0., guix-commits, 2021/06/05
- 136/324: gnu: r-rots: Update to 1.20.0., guix-commits, 2021/06/05
- 94/324: gnu: r-rhdf5filters: Update to 1.4.0., guix-commits, 2021/06/05
- 93/324: gnu: r-reportingtools: Update to 2.32.0., guix-commits, 2021/06/05
- 112/324: gnu: r-oligoclasses: Update to 1.54.0., guix-commits, 2021/06/05
- 133/324: gnu: r-ctc: Update to 1.66.0., guix-commits, 2021/06/05
- 132/324: gnu: r-genomicinteractions: Update to 1.26.0., guix-commits, 2021/06/05