241/324: gnu: r-flowsom: Update to 2.0.0.

[guix-commits]

rekado pushed a commit to branch master
in repository guix.

commit 9ed2ec5bffe4fae0c30272344096b2cb56765d18
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Sat Jun 5 08:50:06 2021 +0200

    gnu: r-flowsom: Update to 2.0.0.
    
    * gnu/packages/bioconductor.scm (r-flowsom): Update to 2.0.0.
    [propagated-inputs]: Remove r-tsne; add r-colorramps, r-dplyr, r-ggforce, 
r-ggnewscale,
    r-ggplot2, r-ggpointdensity, r-ggpubr, r-ggrepel, r-magrittr,
    r-pheatmap, r-rlang, r-rtsne, r-scattermore, and r-tidyr.
---
 gnu/packages/bioconductor.scm | 19 ++++++++++++++++---
 1 file changed, 16 insertions(+), 3 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 71fa213..3388d93 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -9774,25 +9774,38 @@ standard to exchange gated cytometry data with other 
software platforms.")
 (define-public r-flowsom
   (package
     (name "r-flowsom")
-    (version "1.22.0")
+    (version "2.0.0")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "FlowSOM" version))
        (sha256
         (base32
-         "0gydp6q6zqkadw356k9br646zfynz8gk9ckbx9d297x503j5sgwf"))))
+         "18h7p7g3w9imyd1c93jllgp4kd74z96cs85wcqfhmd26nx18hl82"))))
     (properties `((upstream-name . "FlowSOM")))
     (build-system r-build-system)
     (propagated-inputs
      `(("r-biocgenerics" ,r-biocgenerics)
+       ("r-colorramps" ,r-colorramps)
        ("r-consensusclusterplus" ,r-consensusclusterplus)
        ("r-cytoml" ,r-cytoml)
+       ("r-dplyr" ,r-dplyr)
        ("r-flowcore" ,r-flowcore)
        ("r-flowworkspace" ,r-flowworkspace)
+       ("r-ggforce" ,r-ggforce)
+       ("r-ggnewscale" ,r-ggnewscale)
+       ("r-ggplot2" ,r-ggplot2)
+       ("r-ggpointdensity" ,r-ggpointdensity)
+       ("r-ggpubr" ,r-ggpubr)
+       ("r-ggrepel" ,r-ggrepel)
        ("r-igraph" ,r-igraph)
+       ("r-magrittr" ,r-magrittr)
+       ("r-pheatmap" ,r-pheatmap)
        ("r-rcolorbrewer" ,r-rcolorbrewer)
-       ("r-tsne" ,r-tsne)
+       ("r-rlang" ,r-rlang)
+       ("r-rtsne" ,r-rtsne)
+       ("r-scattermore" ,r-scattermore)
+       ("r-tidyr" ,r-tidyr)
        ("r-xml" ,r-xml)))
     (home-page "https://bioconductor.org/packages/FlowSOM/";)
     (synopsis "Visualize and interpret cytometry data")