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branch core-updates updated (e7f0835 -> 8d59c26)
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From: |
guix-commits |
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Subject: |
branch core-updates updated (e7f0835 -> 8d59c26) |
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Date: |
Sun, 6 Jun 2021 15:36:39 -0400 (EDT) |
mbakke pushed a change to branch core-updates
in repository guix.
from e7f0835 gnu: nss: Use (guix utils).
add 3a396b0 gnu: python-genshi: Update to 0.7.5.
add 9419f97 gnu: python-terminado: Update to 0.10.0.
add 2f97a66 gnu: python-urllib3: Don't use 'package/inherit' on
replacement package.
add 080770e gnu: python-django-statici18n: Update to 2.1.0.
add 35bd94a etc: Add more SELinux permissions for the daemon.
add d51b8ac gnu: Remove python2-notebook.
add 8a0e94f gnu: Remove python2-ipython-cluster-helper.
add 015869d gnu: cmdtest: Use a source file-name.
add dac6c21 gnu: zam-plugins: Update source hash.
add bc4d81d lint: archival: Lookup content in Disarchive database.
add d900cba gnu: luakit: Update to 2.3.
add cfec09a import: hackage: Prefix licenses with 'license:'.
add 6a54e81 gnu: Add jumpapp.
add c8d6fa7 doc: Add information about first patch.
add 58b85f7 gnu: Add xdo.
add d49402a gnu: cl-trivial-features: Update to 1.0.
add 9351b2a gnu: squashfs-tools: Prepare for GCC 10.
add dbcf2b6 gnu: Fix erroneous uses of 'package/inherit'.
add 250a216 gnu: OpenSSL: Replace with 1.1.1k [fixes CVE-2021-3449 and
CVE-2021-3450].
add a9f84f9 gnu: libx11: Update replacement to 1.7.1 [fixes
CVE-2021-31535].
add 030bdbf gnu: notmuch: Update to 0.32.1.
add 4b08aad doc: Correct spelling
add 1c4144a gnu: ois: Update to 1.5.1.
add b83a8c7 gnu: filezilla: Update to 3.54.1.
add f72e2d2 gnu: slurm: Update to 20.11.7.
add ba31fbb gnu: cava: Update to 0.7.4.
add d289a60 gnu: nvc: Update to 1.5.1.
add 755d494 gnu: butt: Update to 0.1.30.
add 6c7dc0b gnu: butt: Add snippet.
add da671c1 gnu: abook: Fix typo in description.
add 97cb3cf gnu: parallel: Update to 20210522.
add ada6f39 gnu: hddtemp: Update to 0.4.3.
add 5c49c38 gnu: diffoscope: Update to 175.
add 0dcb822 gnu: exfatprogs: Update to 1.1.2.
add 45dd728 gnu: freeipmi: Update to 1.6.8.
add cbaa8e0 gnu: python-django-compressor: Update to 2.4.12.4.1.
add 5524460 gnu: retroarch: Update to 1.9.3.
add 363095f gnu: ltris: Update to 1.2.3.
add d694018 gnu: libetonyek: Update to 0.1.10.
add aa65bba gnu: libmediaart: Update to 1.9.5.
add b40090b gnu: mm-common: Update to 1.0.3.
add 36d2e48 gnu: lmdb: Update to 0.9.29.
add ec81488 gnu: md4c: Update to 0.4.8.
add 169cbd8 gnu: Respect the root file-system's CHECK? field.
add 5b76cda gnu: qutebrowser: Update to 2.2.2.
add 2bd09dd gnu: surf: Update to 2.1.
add b95fbb5 gnu: whois: Update to 5.5.9.
add 88c8a91 gnu: frrouting: Update to 7.5.17.5.1.
add 22d4c2e gnu: hangups: Update to 0.4.14.
add 162fa6bd gnu: libsignal-protocol-c: Update to 2.3.3.
add cf105d9 gnu: font-sarasa-gothic: Update to 0.31.2.
add ac95609 gnu: services: Add missing wireguard related exports.
add 029a3fe gnu: python-nltk-3.4: Add missing input.
add 67ac434 gnu: python-nltk: Add missing inputs.
add 4ea6161 gnu: python-matplotlib: Don't hardcode python version.
add 0befeed gnu: linux-libre: Update to 5.12.6.
add 2e3c8a5 gnu: linux-libre 5.10: Update to 5.10.39.
add 443d3c6 gnu: linux-libre 5.4: Update to 5.4.121.
add 2fca4ac gnu: linux-libre 4.19: Update to 4.19.191.
add 9a57cac gnu: linux-libre 4.14: Update to 4.14.233.
add 19f0faf gnu: linux-libre 4.9: Update to 4.9.269.
add 1731561 gnu: linux-libre 4.4: Update to 4.4.269.
add 9b4f903 gnu: HYPRE: Update source and home page URLs.
add 488fc3d gnu: python-breathe: Update to 4.30.0.
add 3aea143 gnu: python2-shapely: Remove package.
add e47b7a7 gnu: i2pd: update to 2.38.0.
add e52c64c gnu: i2pd: Reflow package definition.
add a0b3190 gnu: i2pd: Allow skipping tests.
add 03eb0b1 gnu: infamous-plugins: Fix build.
add fa4dae6 gnu: infamous-plugins: Update to 0.3.0.
add a5c2e0d ci: Add derivation inputs.
add de393bd doc: Remove reference to mips64.
add 0e00784 gnu: Add cl-arnesi.
add 1634283 gnu: Add cl-gettext.
add 77bd1b5 gnu: Add cl-parser-combinators.
add 7af6a35 gnu: Add cl-locale.
add a0dcb1a gnu: Add cl-slice.
add 3a89ff1 gnu: Add cl-djula.
add 6602d89 gnu: emasc-geiser: Update to 0.16.
add 68b6ea5 gnu: emacs-geiser-guile: Update to 0.17.
add 3c52c96 gnu: Remove unnecessary patches for emacs-geiser.
add 7c10650 gnu: lagrange: Update to 1.4.2.
add ae88e30 gnu: Add emacs-geiser-racket.
add f820315 gnu: emacs-xyz.scm: Add missing copyright line.
add b1bbeea gnu: openttd-engine: Update to 1.11.2.
add a443181 gnu: emacs-vertico: Update to 0.11.
add a68cca6 gnu: Add kanatest.
add a154048 gnu: emacs-shell-command+: Update to 2.2.0.
add bc13e79 gnu: Add perl-const-fast.
add 414e41d gnu: cuirass: Update to 1.0.0-18.b1abb44.
add 906cdbd gnu: Add perl-data-uuid.
add fe578ee gnu: Add perl-extutils-manifest.
add 5bfb84b gnu: Add perl-log-message.
add ac30a53 gnu: Add perl-log-message-simple
add dc85100 gnu: Add perl-set-intervaltree.
add c942e17 gnu: qhull: Link binaries to shared library.
add d2a8b72 gnu: cuirass: Update to 1.0.0-19.e1382f0.
add 0ffac75 gnu: qhull: Build position independent.
add d366557 gnu: nginx: Update to 1.21.0 [fixes CVE-2021-23017].
add 458126a gnu: Add rsync 3.2.3.
add 1893116 gnu: Add r-aneufinderdata.
add b84ead8 gnu: Add r-aneufinder.
add b1fee8a gnu: Add r-spp.
add af163ba gnu: Add r-phantompeakqualtools.
add 9048e7f gnu: Add r-bsgenome-btaurus-ucsc-bostau8.
add 3f2a4b0 gnu: Add r-pvclust.
add 5aa68a9 gnu: Add r-model4you.
add 94b8ad4 gnu: Add r-chipseeker.
add 63962f9 gnu: Add minimodem.
add 3d704fa gnu: cuirass: Update to 1.0.0-20.524b81d.
add 834f649 gnu: Add r-geneoverlap.
add 9987335 gnu: Add r-deepsnv.
add f921981 gnu: Add r-decipher.
add 1ae67e6 gnu: Add r-contfrac.
add 1af2da5 gnu: Add r-elliptic.
add fef452b gnu: Add r-hypergeo.
add 6c7aafb gnu: Add r-kknn.
add e53ecc6 gnu: Add r-logspline.
add 3ea32f5 gnu: Add r-effects.
add b085abb gnu: Add r-bayesfactor.
add 36a90d0 gnu: minimap2: Update to 2.18.
add c5f7203 gnu: minimap2: Install more files.
add 93a5505 gnu: emacs-forge: Update to 0.2.0.
add a5c9843 gnu: emacs-magit: Update to 3.0.0.
add bc251bc gnu: emacs-transient: Update to 0.3.4.
add a866667 gnu: Add emacs-org-inline-pdf.
add da08378 gnu: emacs-shell-command+: Use Git repo instead of ELPA URL.
add 12bdba7 gnu: Add rust-ordered-float-2.
add 510b9ff gnu: Add rust-hyphenation-commons-0.8.
add 8de658d gnu: Add rust-hyphenation-0.8.
add 754d009 gnu: Add rust-textwrap-0.12.
add e881704 gnu: Add rust-os-str-bytes-2.
add d45b6d9 gnu: Add rust-strsim-0.10.
add c0371bd gnu: Add rust-clap-derive-3.
add 0413240 gnu: Add rust-clap-3.
add a721db8 gnu: Add rust-askama-escape-0.10.
add eb3799e gnu: Add rust-askama-shared-0.11.
add 296b72d gnu: Add rust-askama-derive-0.10.
add 8bdc627 gnu: Add rust-askama-0.10.
add cba634e gnu: Add rust-seq-macro-0.2.
add efff3fd gnu: Add zoxide.
add a2155f4 guix: ci: Fix evaluation complete? field.
add 316d9e0 guix: ci: Add spec support to latest-evaluations.
add d3dcb8c gnu: Add lightspark.
add f5282a1 gnu: Add r-rcppnumerical.
add aabea83 gnu: muse-sequencer: Update to 4.0.0.
add 62d6da6 gnu: muse-sequencer: Add optional dependencies.
add 001bb08 gnu: muse-sequencer: Use qt-build-system.
add 2aa622c gnu: zoxide: Add missing space in description.
add 4e9bb49 gnu: Add r-structuralvariantannotation.
add cd5d1df gnu: Add r-hiddenmarkov.
add c662485 gnu: Add r-depmixs4.
add d80cb98 gnu: Add r-rnmf.
add 64eda9c gnu: Add r-tree.
add 315472e gnu: Add r-heatmap3.
add 4fa1275 gnu: Add r-visdat.
add eba5b5c gnu: gwenhywfar: Update to 5.6.0.
add 88c442b gnu: aqbanking: Update to 6.3.0.
add 2a8417d gnu: warzone2100: Update to 4.0.1.
add b7664df gnu: Add r-rnexml.
add 84d551d gnu: Add r-howmany.
add 416eaac gnu: Add r-locfdr.
add 22950d6 gnu: Add r-rncl.
add 9f27579 gnu: Add r-phylobase.
add 1edec0e gnu: Add r-zinbwave.
add 2f91ab7 gnu: Add r-benchmarkmedata.
add ad827f5 gnu: Add r-benchmarkme.
add 700b10f gnu: Add r-mbkmeans.
add 2fc74f3 gnu: Add r-clusterexperiment.
add 832f7c3 gnu: guix-build-coordinator: Update to 0-28.675c52d.
add 8296109 gnu: linux-libre: Update to 5.12.7.
add 92d459d gnu: linux-libre 5.10: Update to 5.10.40.
add f9677bf gnu: linux-libre 5.4: Update to 5.4.122.
add 72538ad gnu: linux-libre 4.19: Update to 4.19.192.
add 2239d98 gnu: linux-libre 4.14: Update to 4.14.234.
add aa024b7 gnu: linux-libre 4.9: Update to 4.9.270.
add e7d5ea9 gnu: linux-libre 4.4: Update to 4.4.270.
add 1ab3aab gnu: Add cl-for.
add 23ab706 gnu: Add cl-flare.
add c555f54 gnu: Add perl-bsd-resource.
add 12392cf gnu: Add r-princurve.
add 5abf8a5 gnu: Add r-slingshot.
add cf9ddbd gnu: Add r-tradeseq.
add 89fd577 gnu: Add r-rffc.
add e7698cb gnu: Add r-pacman.
add 9bffc2b gnu: Add r-memuse.
add 32cce42 gnu: Add r-pinfsc50.
add c8286c8 gnu: Add r-vcfr.
add c7e5007 gnu: emacs-modus-themes: Update to 1.4.0.
add 35311e3 gnu: Add python-simpervisor.
add 34ab622 gnu: Add julia-versionparsing.
add 114db2b gnu: Add julia-invertedindices.
add ced4744 gnu: Add julia-fuzzycompletions.
add 40a7da2 gnu: Add julia-tableiointerface.
add d54d21d gnu: Add julia-indexing.
add f74305a gnu: Add julia-dictionaries.
add a033f81 gnu: Add julia-colorschemes.
add f11621f gnu: Add julia-plotutils.
add 014421e gnu: Add julia-scratch.
add 1ce87b8 gnu: sassc: Update to 3.6.2.
add 3627ac3 gnu: mpd: Update to 0.22.8.
add c59606a gnu: fio: Update to 3.27.
add e6eacc3 gnu: xfsprogs: Update to 5.12.0.
add cedcab1 gnu: libnftnl: Update to 1.2.0.
add e2d3f8d gnu: nftables: Update to 0.9.9.
add a16ce0b gnu: lightspark: Update to 0.8.4.1.
add f2c66d7 gnu: iperf: Update to 3.10.
add 80594d6 gnu: iperf: Omit static library.
add 963c235 gnu: libopenmpt: Update to 0.5.9.
add 9401cb5 gnu: shotwell: Update to 0.30.12.
add f0b9250 gnu: ccl: Update to 1.12.1.
add 49c2e3f gnu: libndp: Update to 1.8.
add 0fd84b7 gnu: lksctp-tools: Edit synopsis & description.
add 32acea7 gnu: lksctp-tools: Update to 1.0.19.
add 847af45 gnu: phodav: Add gsettings-desktop-schemas input.
add 5f1c469 gnu: botan: Update to 2.18.1.
add d1b3b5b gnu: botan: Respect #:tests?.
add 8d4d32d gnu: guix-build-coordinator: Update to 0-29.8c98f47.
add 11ac8ac gnu: entr: Update to 4.9.
add 0b31e45 gnu: Add python-logutils.
add 167fc14 gnu: Add python-helper.
add a30e616 gnu: Add python-htsget.
add 87c9f63 gnu: Add python-pyega3.
add bb5a3e9 gnu: Add python-argopt.
add bd32bcc gnu: gnuradio: Add python-matplotlib dependency explicitly.
add 4ad3f81 gnu: Add python-cachetools.
add 5e0b11f gnu: hackrf: Update to 2021.03.1.
add 90e1f9c gnu: cuirass: Update to 1.0.0-21.65ae16b.
add c82b374 gnu: intel-mpi-benchmarks: Remove top-level reference to
'openmpi'.
add 7243a8c deploy: Error out when the FILE argument is missing.
add 681af1f scripts: Commands warn when passed zero arguments.
add 50d5bb1 git-download: 'git-predicate' now ignores deleted files.
add ebbfee8 git-download: Support submodules in 'git-predicate'.
add a800224 gnu: libraft: Update to 0.10.1
add 3f5bc6c import: opam: Generate license for package.
add 45a96b3 gnu: tryton: Factor out custom ‘check’ phase.
add 0ab7796 gnu: tryton: Use local 'inputs' instead of global
'%build-inputs'.
add 416f784 gnu: tryton: Allow disabling the test suite.
add 45b9875 gnu: cuirass: Update to 1.0.0-22.3ac739b.
add 4ec964e gnu: jami-gnome: Include phases from the
glib-or-gtk-build-system.
add 0b70eb0 gnu: gnutls: Replace with 3.6.16 [fixes CVE-2021-20305].
add b1ae0f3 gnu: Add mosaicatcher.
add f8c4437 guix package: Do not warn about "missing arguments" when
there's nothing to do.
add 22f95a0 doc: Spell out the implications of disabling substitutes.
add a44fa37 guix build: Emit "nothing to do" warning only when needed.
add f5871b1 gnu: Add cbc.
add 30713c2 gnu: ipopt: Update to 3.13.4
add 02f6144 gnu: Add mbuffer.
add 803be09 gnu: Add hostscope.
add d7c356e gnu-maintenance: 'release-file?' accepts 'v' prefix as in
"PKG-v1.2.tgz".
add 84f8bae gnu-maintenance: 'generic-html' correctly handles relative
release URLs.
add ca1caf9 gnu: hostscope: Add 'release-monitoring-url' property.
add 9d439e3 gnu: Add xjobs.
add cefa260 gnu: xjobs: Add 'release-monitoring-url' property.
add 63ee921 gnu: emacs-amx: Update to 3.4.
add 6860b15 gnu: emacs-auto-sudoedit: Update to 1.1.0.
add c649946 gnu: emacs-chronometrist: Update to 0.7.0.
add c8fc1e4 gnu: emacs-cider: Update to 1.1.1.
add f95a062 gnu: emacs-counsel-jq: Update to 1.1.
add a37159c gnu: emacs-csharp-mode: Update to 0.11.0.
add 12489ee gnu: emacs-cwl-mode: Update to 0.2.6.
add 6417b97 Revert "gnu: Add mosaicatcher."
add 6490764 gnu: nyacc: Update to 1.04.0.
add e3cde9a gnu: Add mosaicatcher.
add 6e1cf43 gnu: cuirass: Update to 1.0.0-23.58e3551.
add ef5c6f9 gnu: mc: Support mice.
add 11e4ccc Sort module imports in (gnu packages mc).
add 38e8ffe gnu: mc: Order inputs alphabetically.
add 947398c gnu: emacs: Support console mice.
add 9e632a5 gnu: isc-dhcp: Update to 4.4.2-P1 [fixes CVE-2021-25217].
add ee20613 gnu: isc-dhcp: Update home page.
add 38c892f gnu: libjcat: Update to 0.1.8.
add 1374347 gnu: libolm: Update to 3.2.3.
add f3a15e5 gnu: emacs-datetime: Update to 0.7.
add f22c1cb gnu: emacs-dired-sidebar: Update to 0.2.0.
add d7c61c3 gnu: emacs-d-mode: Update to 2.0.11.
add a8aafa3 gnu: emacs-d-mode: Clean up description.
add d936eee gnu: emacs-dockerfile-mode: Update to 1.4.
add 23fb3fa gnu: emacs-doom-modeline: Update to 3.1.1.
add 9a254d5 gnu: emacs-ebib: Update to 2.32.1.
add bc068d3 gnu: emacs-eldev: Update to 0.9.1.
add 13ab81d gnu: emacs-elfeed-score: Update to 0.7.8.
add 218bea8 gnu: emacs-esxml: Update to 0.3.7.
add 1a597af gnu: emacs-evil-commentary: Update to 2.2.0.
add fac0967 gnu: emacs-evil-matchit: Update to 2.3.11.
add 838835d gnu: emacs-evil-nerd-commenter: Update to 3.5.4.
add e1e7cb6 gnu: emacs-ewmctrl: Update to 1.0.0.
add da71f74 gnu: emacs-exwm-x: Update to 2.0.2.
add c899ed0 gnu: emacs-find-file-in-project: Update to 6.0.7.
add 8691ea2 gnu: emacs-geiser-racket: Remove ".git" suffix from origin
URI.
add feb9ae9 gnu: emacs-ghub: Update to 3.5.3.
add e1e4684 gnu: emacs-gitlab-ci-mode: Update to 20190824.12.2.
add 649d9bc gnu: emacs-gitlab-ci-mode: Drop ".git" suffix in source URI.
add e35f0c4 gnu: emacs-god-mode: Update to 2.17.3.
add b273527 gnu: emacs-helm: Update to 3.7.1.
add 7c45ad2 gnu: emacs-helm-ag: Update to 0.64.
add d4037e7 gnu: emacs-helm-org-rifle: Update to 1.7.1.
add 71fd285 gnu: emacs-highlight-defined: Update to 0.1.6.
add 57b9db9 gnu: emacs-hl-todo: Update to 3.3.0.
add 7327504 gnu: emacs-ido-completing-read+: Update to 4.13.
add e11cb6b gnu: emacs-jsonnet-mode: Update to 0.1.3.
add 9921102 gnu: emacs-magit-annex: Update to 1.8.0.
add bf9e2fe gnu: emacs-magit-svn: Update to 2.2.3.
add 20f0027 gnu: emacs-markdown-preview-mode: Update to 0.9.4.
add 130f407 gnu: emacs-minitest: Update to 0.9.2.
add 6f7b302 gnu: emacs-no-littering: Update to 1.2.2.
add c0ea8d8 gnu: emacs-olivetti: Update to 1.11.4.
add 400a2a6 gnu: emacs-org-fragtog: Update to 0.3.2.
add 42178c8 gnu: emacs-orgit: Update to 1.7.0.
add b037cac gnu: emacs-org-re-reveal: Update to 3.9.0.
add 57e6d4e gnu: emacs-org-roam-bibtex: Update to 0.6.0-pre.2.
add 55c812c gnu: emacs-org-static-blog: Update to 1.5.0.
add 8689821 gnu: emacs-org-trello: Update to 0.8.2.
add b7a9b63 gnu: emacs-package-lint: Update to 0.15.
add 8fd54b9 gnu: emacs-pandoc-mode: Update to 2.31.
add eb00037 gnu: emacs-parsec: Update to 0.1.4.
add 39eb5a1 gnu: emacs-perspective: Update to 2.15.
add c85289a gnu: emacs-projectile: Update to 2.4.0.
add b4f579b gnu: emacs-pubmed: Update to 0.5.
add 9e29523 gnu: emacs-puppet-mode: Update to 0.4.
add ea9276d gnu: emacs-pyim: Update to 3.7.9.
add b6c3e24 gnu: emacs-python-black: Update to 1.1.0.
add d40adba gnu: emacs-rainbow-delimiters: Update to 2.1.5.
add 997573f gnu: emacs-robe: Update to 0.8.3.
add 368887f gnu: emacs-roguel-ike: Update to 0.1.1.
add 0fc6f38 gnu: emacs-simple-modeline: Update to 1.4.
add b1f613f gnu: emacs-solaire-mode: Update to 1.1.5.
add e4f8ae2 gnu: emacs-templatel: Update to 0.1.6.
add 71fe50b gnu: emacs-tide: Update to 4.2.3.
add c4e6b6e gnu: emacs-visual-fill-column: Update to 2.4.
add e579aeb gnu: emacs-wc-mode: Update to 1.4.1.
add 28e6e48 gnu: emacs-webpaste: Update to 3.2.1.
add 87e3a63 gnu: emacs-window-purpose: Update to 1.8.
add 0a7a267 gnu: emacs-with-editor: Update to 3.0.4.
add 555bc7a gnu: emacs-with-simulated-input: Update to 3.0.
add b76db6e gnu: emacs-writegood-mode: Update to 2.0.4.
add 636d25c gnu: links: Update to 2.23.
add d5aa478 gnu: oil: Update to 0.8.11.
add 34fe60e gnu: httpd: Update to 2.4.48.
add 65161eb gnu: svt-hevc: Update to 1.5.1.
add f0b20dc gnu: remmina: Update to 1.4.17.
add 7aa9785 gnu: welle-io: Update to 2.3.
add 95f104b gnu: hamlib: Update to 4.2.
add 949b376 gnu: Add emacs-literate-elisp.
add a208b50 gnu: emacs-chronometrist: Add missing propagated input.
add ef8d95c gnu: emacs-ebib: Add missing propagated input.
add 7de36f7 gnu: emacs-esxml: Limit packaged files.
add 8415731 gnu: libfm-qt: Update to 0.17.1.
add 1ae280c gnu: lxqt-qtplugin: Update to 0.17.0.
add 64f28a6 gnu: lxqt-build-tools: Update to 0.9.0.
add c4df64d gnu: libqtxdg: Update to 3.7.1.
add 9e23419 gnu: liblxqt: Update to 0.17.0.
add 7cd8866 gnu: libsysstat: Update to 0.4.5.
add cfd40e6 gnu: lxqt-about: Update to 0.17.0.
add a5fe520 gnu: lxqt-admin: Update to 0.17.0.
add e84f3a7 gnu: lxqt-config: Update to 0.17.1.
add c10b29b gnu: lxqt-globalkeys: Update to 0.17.0.
add f4a88fe gnu: lxqt-notificationd: Update to 0.17.0.
add af56f2e gnu: lxqt-policykit: Update to 0.17.0.
add d0133d5 gnu: lxqt-powermanagement: Update to 0.17.1.
add 9987e7a gnu: lxqt-runner: Update to 0.17.0.
add 78604a1 gnu: lxqt-session: Update to 0.17.1.
add e842014 gnu: lxqt-panel: Update to 0.17.1.
add d71c5ec gnu: lxqt-sudo: Update to 0.17.0.
add 4979d4e gnu: lxqt-themes: Update to 0.17.0.
add 8878369 gnu: pcmanfm-qt: Update to 0.17.0.
add 528a3c4 gnu: lximage-qt: Update to 0.17.0.
add aff495c gnu: obconf-qt: Update to 0.16.1.
add 50b98fe gnu: pavucontrol-qt: Update to 0.17.0.
add 4ff16c5 gnu: qtermwidget: Update to 0.17.0.
add 680f3a3 gnu: qterminal: Update to 0.17.0.
add 76f4af8 gnu: screengrab: Update to 2.2.0.
add 50ea35b gnu: lxqt-archiver: Update to 0.4.0.
add 223b40b gnu: compton-conf: Update to 0.16.0.
add 811a027 gnu: qps: Update to 2.3.0.
add 73c8bb7 gnu: lxqt-openssh-askpass: Update to 0.17.0.
add 3e29412 gnu: lxqt-connman-applet: Update to 0.15-db1618d5.
add c03908f gnu: lxqt: Use the projects version number.
add 20eea7b gnu: lxqt: Use picom instead of compton.
add 6d5ff52 gnu: lxqt-config: Move libkscreen to propagated-inputs.
add f8adff1 gnu: Update lxqt home-page for all lxqt packages.
add 338f012 doc: lxqt-desktop-service: Update lxqt homepage url.
add 395e20e gnu: Register gnu/services/ci.scm and gnu/tests/ci.scm.
add c094e57 gnu: Break up import loop between (gnu packages racket) and
(gnu packages chez).
add 036f998 gnu: guile-studio: Update to 0.1.1.
add c636233 gnu: linux-libre: Update to 5.12.8.
add a6a22f7 gnu: linux-libre 5.10: Update to 5.10.41.
add 570b4c8 gnu: linux-libre 5.4: Update to 5.4.123.
add 18562b7 gnu: emacs-org-generate: Disable tests to let the package
build.
add dd083bd gnu: emacs-evil-magit: Update to 0.4.2-5.98c076f.
add 055d0fa gnu: Add guile-drmaa.
add d7d6c9e gnu: bootloader: Fix install-allwinner64-u-boot.
add b5069d8 gnu: linux-libre@5.12: Apply patch to fix eDP panel on
Pinebook Pro.
add fd90a36 gnu: cuirass: Update to 1.0.0-24.f0be14a.
add 8774e1b gnu: cuirass: Update to 1.0.0-25.2120276.
add 4562c60 gnu: rlwrap: Update to 0.45.1.
add efd524e gnu: rlwrap: Fix single-quotation in Texinfo.
add fc71a45 gnu: python-cookiecutter: Update to 1.7.3.
add 2a600ae gnu: python-fastjsonschema: Update to 2.15.1.
add cc142c9 gnu: net-snmp: Update to 5.9.1.
add 3573e73 gnu: net-snmp: Omit static library.
add 237b744 gnu: python-hupper: Update to 1.10.3.
add ae30385 gnu: Add lingot.
add c00b176 gnu: vapoursynth: Wrap with own PYTHONPATH.
add 0f6902e gnu: julia-jllwrappers: Move to (gnu packages julia-jll).
add e5ff6dc gnu: julia-compilersupportlibraries-jll: Move to (gnu
packages julia-jll).
add cc54d4b gnu: julia-gumbo-jll: Move to (gnu packages julia-jll).
add f0e0b9a gnu: julia-jpegturbo-jll: Move to (gnu packages julia-jll).
add e2496a8 gnu: julia-mbedtls-jll: Move to (gnu packages julia-jll).
add 0083404 gnu: julia-openspecfun-jll: Move to (gnu packages julia-jll).
add fda20c7 gnu: julia-zlib-jll: Move to (gnu packages julia-jll).
add 4a1d456 gnu: julia-zstd-jll: Move to (gnu packages julia-jll).
add 8ca2dc0 gnu: julia-libpng-jll: Move to (gnu packages julia-jll).
add da12e8f gnu: julia-libtiff-jll: Move to (gnu packages julia-jll).
add 191c345 gnu: julia-imagemagick-jll: Move to (gnu packages julia-jll).
add 4073aea gnu: Add julia-x264-jll.
add 76cdb2b gnu: Add julia-bzip2-jll.
add a1b7d59 gnu: Add julia-fribidi-jll.
add 741aab4 gnu: Add julia-freetype2-jll.
add 6e07d69 gnu: Add julia-libfdk-aac-jll.
add d3f8731 gnu: Add julia-lame-jll.
add 75ea06d gnu: Add julia-ogg-jll.
add 92e817e gnu: Add julia-libvorbis-jll.
add 5cd1372 gnu: Add julia-x265-jll.
add a18d0aa gnu: Add julia-openssl-jll.
add afff06e gnu: Add julia-opus-jll.
add f711bb1 gnu: Add julia-libass-jll.
add 94963f0 gnu: Add julia-ffmpeg-jll.
add 0c1b344 gnu: Add julia-ffmpeg.
add b3ffbab gnu: Add julia-libiconv-jll.
add 09b63f2 gnu: Add julia-libffi-jll.
add 7180dcd gnu: Add julia-xml2-jll.
add ceb7936 gnu: Add julia-gettext-jll.
add 088e1a5 gnu: Add julia-pcre-jll.
add 5f7fb56 gnu: Add julia-libmount-jll.
add b729895 gnu: Add julia-glib-jll.
add a4dbdba gnu: Add julia-pixman-jll.
add e2ee668 gnu: Add julia-libuuid-jll.
add 3d12f59 gnu: Add julia-expat-jll.
add 154f0a9 gnu: Add julia-xorg-libxau-jll.
add 71b0d28 gnu: Add julia-xorg-libxdmcp-jll.
add cf4a0c1 gnu: Add julia-libgpg-error-jll.
add 2ee28bf gnu: Add julia-libgcrypt-jll.
add 6e79595 gnu: Add julia-xorg-xtrans-jll.
add f57a0f4 gnu: Add julia-lzo-jll.
add 8a2e54c gnu: Add julia-xslt-jll.
add f5cf709 gnu: Add julia-xorg-libpthread-stubs-jll.
add 6b10ebc gnu: Add julia-xorg-libxcb-jll.
add 2b93e8c gnu: Add julia-xorg-libx11-jll.
add 7cb9173 gnu: Add julia-xorg-libxext-jll.
add d604f4f gnu: Add julia-fontconfig-jll.
add 390bedd gnu: Add julia-xorg-libxrender-jll.
add 7f8cbd0 gnu: Add julia-cairo-jll.
add 98cfe46 gnu: Add julia-xorg-libxfixes-jll.
add 92873d3 gnu: Add julia-xorg-libxcursor-jll.
add 7946cd3 gnu: Add julia-libglvnd-jll.
add 2cc2507 gnu: Add julia-xorg-libxi-jll.
add f703342 gnu: Add julia-xorg-libxinerama-jll.
add d390330 gnu: Add julia-xorg-libxrandr-jll.
add 46fafec gnu: Add julia-glfw-jll.
add 824f4ba gnu: Add julia-wayland-jll.
add dfaddea gnu: Add julia-wayland-protocols-jll.
add a2eb232 gnu: Add julia-xorg-libxkbfile-jll.
add d6227a3 gnu: Add julia-xorg-xkbcomp-jll.
add 845be82 gnu: Add julia-xorg-xkeyboard-config-jll.
add 4d6ef7e gnu: Add julia-xkbcommon-jll.
add 47bcda6 gnu: Add julia-xorg-xcb-util-jll.
add d5c186e gnu: Add julia-xorg-xcb-util-wm-jll.
add 13b1181 gnu: Add julia-xorg-xcb-util-image-jll.
add 24ad2dc gnu: Add julia-xorg-xcb-util-keysyms-jll.
add 274fb92 gnu: Add julia-xorg-xcb-util-renderutil-jll.
add 0e7925f gnu: Add julia-qt5base-jll.
add ab942d5 gnu: Add julia-plotthemes.
add 8f856c8 gnu: Add julia-splitapplycombine.
add 9d6bf9a gnu: Add julia-measures.
add 296fe37 gnu: vapoursynth: Make python a regular input.
add d9e4298 gnu: emacs-consult: Update to 0.8.
add 13df9f8 gnu: emacs-marginalia: Update to 0.6.
add 3c5a58c gnu: mame: Update to 0.232.
add 17ace33 gnu: axoloti-runtime: Patch firmware Makefile.
add 32a44fb gnu: vapoursynth: Update to 53.
add e9cbb97 gnu: cryptsetup: Update to 2.3.6.
add bf2a361 gnu: cryptsetup: Rewrite synopsis & description.
add d342d06 gnu: julia-plotutils: Fix typo in description.
add 836f5fc gnu: zoxide: Fix typo in synopsis.
add d127fdd doc: Fix typos.
add 6086e6e gnu: r-benchmarkmedata: Fix typo in description.
add b9ac7d9 doc: Add a note about networking requirements for SSH access
to VMs.
add 221141c gnu: gnuastro: Update to 0.15.
add ad7c7b5 gnu: Add python-google.
add 47f31c0 gnu: Add python-pyflow.
add c7f0237 gnu: yml2: Update to 2.7.0.
add 85d8028 gnu: pep-engine: Update to 2.1.34.
add c178f85 gnu: libpEpAdapter: Update to 2.1.21.
add 140087f gnu: python-pep-adapter: Update to 2.1.3.
add c85edf2 gnu: java-pep-adapter 2.1.23.
add ccbf9c4 gnu: Add julia-dataapi.
add 21df298 gnu: Add julia-datavalueinterfaces.
add 43f26ea gnu: Add julia-iteratorinterfaceextensions.
add 3f40ba7 gnu: Add julia-tabletraits.
add e886181 gnu: Add julia-datavalues.
add a61e13f gnu: Add julia-tableshowutils.
add 209a80c gnu: Add julia-queryoperators.
add db2bfcb gnu: Add julia-missings.
add 2bd2406 gnu: Add julia-tables.
add f7f1efe gnu: Add julia-statsapi.
add 6dd2634 gnu: Add julia-arraylayouts.
add fa945a5 gnu: Add julia-matrixfactorizations.
add 2615a8b gnu: Add julia-optimtestproblems.
add 73b6f78 gnu: Add julia-exprtools.
add f273a4b gnu: Add julia-mocking.
add 277fef2 gnu: Add julia-quadmath.
add 6a2d36c gnu: Add julia-tensorcore.
add ea03851 gnu: Add julia-mappedarrays.
add 2262f79 gnu: Add julia-graphics.
add a336959 gnu: Add julia-rangearrays.
add 4541cda gnu: Add julia-indirectarrays.
add 9f92c8b gnu: Add julia-pooledarrays.
add f34f8a3 gnu: Add julia-weakrefstrings.
add adedfd0 gnu: Add julia-typedtables.
add 9bb2e64 gnu: Add julia-formatting.
add d2d1f8b gnu: Add julia-prettytables.
add ca1a015 gnu: r-genomicalignments: Move to (gnu packages bioconductor).
add a88230a gnu: r-rtracklayer: Move to (gnu packages bioconductor).
add f78ff75 gnu: r-genomicfeatures: Move to (gnu packages bioconductor).
add 90bbab5 gnu: r-topgo: Move to (gnu packages bioconductor).
add 537d48d gnu: r-bsgenome: Move to (gnu packages bioconductor).
add 8c7c78b gnu: r-msnid: Move to (gnu packages bioconductor).
add 4f030cc gnu: r-msnbase: Move to (gnu packages bioconductor).
add a2a1d86 gnu: r-samr: Move to (gnu packages bioconductor).
add b832fdd gnu: r-impute: Move to (gnu packages bioconductor).
add 14fb30e gnu: r-seqpattern: Move to (gnu packages bioconductor).
add f3b50aa gnu: r-go-db: Move to (gnu packages bioconductor).
add f8fe549 gnu: r-genomation: Move to (gnu packages bioconductor).
add d7fa9c1 gnu: r-genomationdata: Move to (gnu packages bioconductor).
add ad46c8a gnu: r-pcamethods: Move to (gnu packages bioconductor).
add 7756e08 gnu: r-mzid: Move to (gnu packages bioconductor).
add bb118f2 gnu: r-aroma-light: Move to (gnu packages bioconductor).
add ef954bb gnu: r-deseq: Move to (gnu packages bioconductor).
add f6f43a2 gnu: r-edaseq: Move to (gnu packages bioconductor).
add dfe6224 gnu: r-interactivedisplaybase: Move to (gnu packages
bioconductor).
add 9644745 gnu: r-annotationhub: Move to (gnu packages bioconductor).
add 32ae36e gnu: r-fastseg: Move to (gnu packages bioconductor).
add 22cda2e gnu: r-affy: Move to (gnu packages bioconductor).
add d0a5503 gnu: r-keggrest: Move to (gnu packages bioconductor).
add 84019ed gnu: r-gage: Move to (gnu packages bioconductor).
add ff65fa9 gnu: r-complexheatmap: Move to (gnu packages bioconductor).
add 0b5b41c gnu: r-genomicfiles: Move to (gnu packages bioconductor).
add d1ea2b7 gnu: r-dirichletmultinomial: Move to (gnu packages
bioconductor).
add 8182e6a gnu: r-organismdbi: Move to (gnu packages bioconductor).
add 96ae982 gnu: r-affyio: Move to (gnu packages bioconductor).
add 8d4311b gnu: r-vsn: Move to (gnu packages bioconductor).
add fea33b9 gnu: r-biovizbase: Move to (gnu packages bioconductor).
add 88cf24f gnu: r-ensembldb: Move to (gnu packages bioconductor).
add 720d269 gnu: r-mzr: Move to (gnu packages bioconductor).
add 900ef8f gnu: r-protgenerics: Move to (gnu packages bioconductor).
add 621aa3b gnu: r-sva: Move to (gnu packages bioconductor).
add c2a18ae gnu: r-motifrg: Move to (gnu packages bioconductor).
add 0006a66 gnu: r-seqlogo: Move to (gnu packages bioconductor).
add e0c8158 gnu: r-zlibbioc: Move to (gnu packages bioconductor).
add 043c309 gnu: r-rhtslib: Move to (gnu packages bioconductor).
add 45b6db4 gnu: r-bamsignals: Move to (gnu packages bioconductor).
add 7360dea gnu: r-rcas: Move to (gnu packages bioconductor).
add bf8f502 gnu: r-mutationalpatterns: Move to (gnu packages
bioconductor).
add b6e84d3 gnu: r-tximport: Move to (gnu packages bioconductor).
add 67e9936 gnu: r-rhdf5filters: Move to (gnu packages bioconductor).
add cc1dbea gnu: r-annotationfilter: Move to (gnu packages bioconductor).
add 0eaa75c gnu: r-rhdf5: Move to (gnu packages bioconductor).
add 31e50e1 gnu: r-chipseq: Move to (gnu packages bioconductor).
add 36cb010 gnu: r-copyhelper: Move to (gnu packages bioconductor).
add 7ab44ae gnu: r-copywriter: Move to (gnu packages bioconductor).
add c294c0d gnu: r-methylkit: Move to (gnu packages bioconductor).
add b0ecd6c gnu: r-phantompeakqualtools: Let-bind commit, set revision to
1.
add 1a6108c gnu: r-geneoverlap: Move out of experiment section.
add a6e7afd gnu: r-spp: Move to (gnu packages bioconductor).
add ec543ba gnu: r-chipseeker: Move out of experiment section.
add f383f9e gnu: filevercmp: Use git-version.
add 09b50a6 gnu: bismark: Use git-file-name.
add 3acfbd4 gnu: f-seq: Use git-version and git-file-name.
add 8c03308 gnu: r-chipkernels: Use git-version and git-file-name.
add d1e1c02 gnu: piranha: Use git-version.
add f463f37 gnu: bits: Use git-version and git-file-name.
add f7825ee gnu: tome4: Update to 1.7.3.
add dafd326 gnu: Add emacs-evil-paredit.
add 71854b7 gnu: Add python-easy-ansi.
add d16ddaf gnu: Add emacs-eyebrowse.
add 4092813 gnu: lagrange: Update to 1.5.0.
add 6cdc1c7 gnu: emacs-posframe: Update to 1.0.3.
add 5af640b gnu: emacs-moody: Update to 0.5.5.
add 4e74d25 gnu: texmacs: Update to 1.99.21.
add 93744e4 gnu: emacs-solaire-mode: Update to 2.0.0.
add eb8928e gnu: emacs-tramp: Update to 2.5.0.5.
add 8a0dc5f tests: Fix loadable-kernel-modules-service tests.
add 62a8d48 services: hostapd: Use package from configuration.
add ea55e13 services: dnsmasq: Extend 'activation-service'.
add 4f2fa2f progress: Add a download-size argument to
progress-report-port.
add 2acc114 publish: Preserve the request connection header.
add 0b8fa24 publish: Add keep-alive support when sending nar.
add a6a1939 gnu: guix-build-coordinator: Update to 0-30.f9af463.
add b346a7c gnu: Add python-stdlib-list.
add 50dfbbf gnu: Add python-sinfo.
add fd0650e gnu: guix: Update to 1.3.0-3.50dfbbf.
add d769fcd gnu: vtk: Wrap python modules.
add 641a88e gnu: Add python-vedo.
add b4e3b77 gnu: sbcl: Update to 2.1.5.
add 7ae2b1f gnu: Add bamutils.
add 0b76b25 tests: hpcguix-web: Fix it.
add 776a21a gnu: rust-cbindgen@0.17: Update to 0.19.0.
add cb82123 gnu: musescore: Add missing QML imports.
add 9ea6e3f gnu: gcc-9: Update to 9.4.0.
add e54c03c gnu: icu4c: Add 69.1.
add 304895d gnu: ungoogled-chromium: Update to 91.0.4472.77-0.6802c88.
add 8d14d60 gnu: unbound: Enable DoH support.
add 49b1570 gnu: llvm-7: Update to 7.1.0.
add 82d8ab0 maint: Require Guile 3.0.
add 5bcb4f8 ui, lint: Simplify exception handling in Guile 3 style.
add fed83e5 nls: Translate (guix diagnostics).
add ec9307e services: cuirass: Create the profile and GC root directory.
add 0db906c services: cuirass: Do not export record type descriptors.
add 2885c35 machine: ssh: Gracefully handle failure of the effectful bits.
add 2df1c4f gnu: rtl8821ce-linux-module: Update to 0.0.0-3.897e7c4.
add c9b3627 gnu: Add why3.
add b94bc3e gnu: Add frama-c.
add 841edfa gnu: redis: Update to 6.2.4 [security fixes].
add 51e8539 gnu: python-sphinx-gallery: Update to 0.9.0.
add 49e4000 gnu: python-hg-evolve: Update to 10.3.1.
add 873c6b4 gnu: icecat: Update to 78.11.0-guix0-preview1 [fixes
CVE-2021-29967].
add da34036 gnu: python-vedo: Make pkg-config a native input.
add 57278dc gnu: libavif: Update to 0.9.1.
add 6c0a09b gnu: retroarch: Update to 1.9.4.
add fa26ca5 gnu: osip: Update to 5.2.1.
add 6fee323 gnu: memtester: Update to 4.5.1.
add f012156 gnu: r-with-tests: Update to 4.1.0.
add 18e0081 gnu: Add libmaus2.
add 011d586 gnu: Add biobambam2.
add 1bd8582 gnu: ispell: Update to 3.4.03.
add 1034399 gnu: Add udftools.
add e17b8d5 gnu: python-django: Update to 3.2.4 [fixes CVE-2021-33203,
CVE-2021-33571].
add 882ec50 gnu: python-django@2.2: Update to 2.2.24 [fixes
CVE-2021-33203, CVE-2021-33571].
add 8cc146b gnu: r-bisquerna: Update to 1.0.5.
add 375fea0 gnu: r-extremes: Update to 2.1-1.
add 05ee34f gnu: r-inline: Update to 0.3.19.
add 52eaf9d gnu: r-fitdistrplus: Update to 1.1-5.
add c4ca93c gnu: r-tinytex: Update to 0.32.
add ec16665 gnu: r-signal: Update to 0.7-7.
add e6068fe gnu: r-zip: Update to 2.2.0.
add 27bff67 gnu: r-fansi: Update to 0.5.0.
add 6c5543d gnu: r-rdpack: Update to 2.1.2.
add 8b45940 gnu: r-insight: Update to 0.14.1.
add 304d9c5 gnu: r-manipulatewidget: Update to 0.11.0.
add 0d813e0 gnu: r-emmeans: Update to 1.6.1.
add 3a5b90d gnu: r-bayestestr: Update to 0.10.0.
add 0bc5c20 gnu: r-effectsize: Update to 0.4.5.
add a9ecb3c gnu: r-sjplot: Update to 2.8.8.
add eb991f3 gnu: r-mvabund: Update to 4.1.12.
add caeed0e gnu: r-weights: Update to 1.0.2.
add ee285cb gnu: r-ks: Update to 1.13.1.
add 0a6526e gnu: r-tidytree: Update to 0.3.4.
add 37fc760 gnu: r-spdep: Update to 1.1-8.
add 509eea0 gnu: r-dalex: Update to 2.2.1.
add 81bb987 gnu: r-plot3d: Update to 1.4.
add 8998ed1 gnu: r-leiden: Update to 0.3.8.
add 47cdb9c gnu: r-parameters: Update to 0.14.0.
add 184b3c5 gnu: r-gdina: Update to 2.8.7.
add 83fa314 gnu: r-actuar: Update to 3.1-4.
add b3aad04 gnu: r-biclust: Update to 2.0.3.
add 317267c gnu: r-archivist: Update to 2.3.6.
add 318808d gnu: r-forecast: Update to 8.15.
add 17bd981 gnu: r-rsconnect: Update to 0.8.18.
add f6ae19f gnu: r-clusterr: Update to 1.2.5.
add d9d8a1c gnu: r-parsnip: Update to 0.1.6.
add 9b9bb2b gnu: r-seurat: Update to 4.0.2.
add 0af6a92 gnu: r-calculus: Update to 0.3.1.
add 72e8eab gnu: r-textshape: Update to 1.7.3.
add fdc6bfa gnu: r-matrix: Update to 1.3-4.
add 61d7869 gnu: r-mgcv: Update to 1.8-36.
add 80f2d36 gnu: r-formatr: Update to 1.11.
add a8313bf gnu: r-rversions: Update to 2.1.1.
add a3268eb gnu: r-rcpparmadillo: Update to 0.10.5.0.0.
add 3319e97 gnu: r-e1071: Update to 1.7-7.
add 350489b gnu: r-matrixstats: Update to 0.59.0.
add c6be262 gnu: r-fastcluster: Update to 1.2.3.
add 08de5b0 gnu: r-beeswarm: Update to 0.4.0.
add 02efdd3 gnu: r-deoptimr: Update to 1.0-9.
add b851f38 gnu: r-robustbase: Update to 0.93-8.
add 5be7870 gnu: pioneer: Build with model files.
add f32e6e1 gnu: Add emacs-org-pandoc-import.
add 6d71f6a gnu: expat: Replace with 2.4.1 [fixes CVE-2013-0340].
add 9e7d93f gnu: curl: Update to 7.77.0 [fixes
CVE-2021-{22897,22898,22901}].
add 929b72d gnu: Add simple-inferiors.
add 80a6de6 gnu: Add legit.
add a923127 gnu: Remove font-ubuntu.
add f6a9798 gnu: openshot: Use free font.
add 13b737f gnu: r-with-tests: Use patched texlive-amsfonts.
add 0928e55 gnu: Add fit-sne.
add fe509e0 machine: ssh: Respect calling convention for monadic
procedures.
add 1e8ebb1 gnu-maintenance: 'generic-html' computes the right source URL.
add bdc298e import: Add CHICKEN egg importer.
add c78d6c6 news: Add entry for 'guix import egg'.
add e4283e0 gnu: rust-assert-cmd-1: Update to 1.0.4.
add 11d84f4 gnu: rust-url-2: Update to 2.2.2.
add 558db7b gnu: Add rust-sha2-asm-0.6.
add adc7fc0 gnu: Add rust-cpufeatures-0.1.
add c695df8 gnu: rust-sha2-0.9: Update to 0.9.5.
add c079654 gnu: rust-reqwest-0.11: Update to 0.11.3.
add ef0daad gnu: rust-reqwest-0.11: Fix build.
add 2282d21 gnu: rust-regex-syntax-0.6: Update to 0.6.25.
add a04dd9b gnu: rust-memchr-2: Update to 2.4.0.
add 71beab1 gnu: rust-aho-corasick-0.7: Update to 0.7.18.
add b7c5f27 gnu: rust-regex-1: Update to 1.5.4.
add 08f1400 gnu: monolith: Update to 2.5.0.
add cc0f152 gnu: emacs-ebdb: Update to 0.6.23.
add 7668c2c gnu: emacs-closql: Update to 1.0.5.
add cf6be24 gnu: emacs-epkg: Update to 3.3.0.
add 606b200 gnu: mtools: Update to 4.0.29.
add e348436 gnu: amule: Update to 2.3.3.
add 0dd2670 gnu: amule: Use HTTPS home page.
add 240cd1a gnu: fltk: Update to 1.3.6.
add 0e8d650 gnu: php: Update to 7.4.20.
add 38adfcd gnu: rasdaemon: Update to 0.6.7.
add 9703a51 gnu: Add rfcat.
add ecbfa20 doc: Fix example iptables configuration.
add 97b4a7e gnu: emacs-calibredb: Update to 2.10.0.
add bb414c9 gnu: komikku: Update to 0.29.0.
add 7e16321 licenses: Add BSD-1-Clause license.
add 41d73df gnu: linux-libre: Update to 5.12.9.
add f23d534 gnu: linux-libre 5.10: Update to 5.10.42.
add a75aa36 gnu: linux-libre 5.4: Update to 5.4.124.
add 37ec3f3 gnu: linux-libre 4.19: Update to 4.19.193.
add ba85dff gnu: linux-libre 4.14: Update to 4.14.235.
add 6fa18e4 gnu: linux-libre 4.9: Update to 4.9.271.
add 6b6b87f gnu: linux-libre 4.4: Update to 4.4.271.
add 6148172 gnu: gajim-omemo: Update to 2.7.14.
add f1bfd9f gnu: remmina: Update to 1.4.18.
add 4f773bc gnu: sbcl-nibbles: Update to 0.14-2.dad2524.
add d06ae05 gnu: Add pigx-sars-cov2-ww.
add a9afff4 doc: Mention virtualization module and add missing closing
parenthesis.
add 8190f5b gnu: ci: Use 'inputs' in build phases instead of
'%build-inputs'.
add f5f78d0 gnu: smalltalk: Use 'inputs' in phases instead of
'%build-inputs'.
add 09be867 gnu: neovim: Use 'inputs' in phases instead of
'%build-inputs'.
add 156b8f9 gnu: qemacs: Use 'native-inputs' instead of '%build-inputs'.
add 4a600ad gnu: ding: Use 'inputs' in build phases instead of
'%build-inputs'.
add 961a8f1 gnu: smalltalk: Move 'zip' from 'inputs' to 'native-inputs'.
add f50a88c gnu: smalltalk: Find glibc even when cross-compiling.
add 1ea00cc gnu: wfview: Update to 1.0.
add bb934ab gnu: python-pydantic: Update to 1.8.2.
add 29745d2 gnu: Use define-public in (gnu packages xiph).
add e639da6 gnu: python-anndata: Update to 0.7.6.
add 7382aa0 gnu: python-scanpy: Update to 1.7.2.
add f98837a gnu: pigx-rnaseq: Update to 0.0.13.
add c343c3b guix: Update to Bioconductor 3.13.
add d5c08f1 gnu: Add r-aplot.
add 41ea9be gnu: Add r-ggnewscale.
add b71f213 gnu: Add r-ggpointdensity.
add ab66c9a gnu: Add r-arrow.
add ce99b4d gnu: Add r-restfulr.
add efefb2b gnu: Add r-trajectoryutils.
add fd4fa40 gnu: Add r-scaledmatrix.
add ab4a91b gnu: Add r-treeio.
add 8caab75 gnu: Add r-ggtree.
add 53ec977 gnu: Add r-metapod.
add 1b0338d gnu: r-rhdf5lib: Update to 1.14.0.
add d0a7dc0 gnu: r-bioccheck: Update to 1.28.0.
add 5d13aab gnu: r-msnid: Update to 1.26.0.
add 87d06a7 gnu: r-mzr: Update to 2.26.0.
add 782d27f gnu: r-rhdf5: Update to 2.36.0.
add 5c37a04 gnu: r-cytolib: Update to 2.4.0.
add b9751b6 gnu: r-ncdfflow: Update to 2.38.0.
add 764e2db gnu: r-flowworkspace: Update to 4.4.0.
add bfa23ec gnu: r-cytoml: Update to 2.4.0.
add 7581795 gnu: r-hdf5array: Update to 1.20.0.
add 405b386 gnu: r-aneufinder: Update to 1.20.0.
add b05761a gnu: r-biocversion: Update to 3.13.1.
add 7bac473 gnu: r-biocgenerics: Update to 0.38.0.
add e6c5d8c gnu: r-coverageview: Update to 1.30.0.
add 116df58 gnu: r-cummerbund: Update to 2.34.0.
add dec096f gnu: r-decipher: Update to 2.20.0.
add f0f839c gnu: r-deepsnv: Update to 1.38.0.
add 8eb0c71 gnu: r-delayedarray: Update to 0.18.0.
add 4075ac7 gnu: r-bluster: Update to 1.2.1.
add cfd4c05 gnu: r-ideoviz: Update to 1.28.0.
add 60b9546 gnu: r-iranges: Update to 2.26.0.
add af04e2c gnu: r-affy: Update to 1.70.0.
add b045bf2 gnu: r-affycomp: Update to 1.68.0.
add bd17bef gnu: r-affycompatible: Update to 1.52.0.
add 3abb0b6 gnu: r-affycontam: Update to 1.50.0.
add a908316 gnu: r-affycoretools: Update to 1.64.0.
add dfeb135 gnu: r-affyio: Update to 1.62.0.
add 308067c gnu: r-affxparser: Update to 1.64.0.
add 1bb8775 gnu: r-annotate: Update to 1.70.0.
add c7811ed gnu: r-annotationdbi: Update to 1.54.0.
add 361f2f6 gnu: r-annotationfilter: Update to 1.16.0.
add 4d13cf0 gnu: r-annotationforge: Update to 1.34.0.
add 2071ed5 gnu: r-annotationhub: Update to 3.0.0.
add 3e29076 gnu: r-aroma-light: Update to 3.22.0.
add baaed6f gnu: r-bamsignals: Update to 1.24.0.
add 8be5d4f gnu: r-biobase: Update to 2.52.0.
add f9ae0a4 gnu: r-biomart: Update to 2.48.0.
add 3eedef8 gnu: r-biocparallel: Update to 1.26.0.
add 16fe6ab gnu: r-biostrings: Update to 2.60.0.
add 98f3c55 gnu: r-biovizbase: Update to 1.40.0.
add e039d07 gnu: r-bsgenome: Update to 1.60.0.
add 336107c gnu: r-category: Update to 2.58.0.
add ca10baf gnu: r-chipseeker: Update to 1.28.3.
add d296ac9 gnu: r-chipseq: Update to 1.42.0.
add a8cfce4 gnu: r-complexheatmap: Update to 2.8.0.
add 2835e7c gnu: r-copywriter: Update to 2.24.0.
add 45225c6 gnu: r-deseq2: Update to 1.32.0.
add e9445cd gnu: r-dexseq: Update to 1.38.0.
add 30ce1f9 gnu: r-dirichletmultinomial: Update to 1.34.0.
add f998c95 gnu: r-edaseq: Update to 2.26.0.
add bdc1b90 gnu: r-edger: Update to 3.34.0.
add 6abbb53 gnu: r-ensembldb: Update to 2.16.0.
add ff59b34 gnu: r-fastseg: Update to 1.38.0.
add f22f4ca gnu: r-gage: Update to 2.42.0.
add 389ce4e gnu: r-genefilter: Update to 1.74.0.
add 3c024e9 gnu: r-geneoverlap: Update to 1.28.0.
add ef7bbc4 gnu: r-genomation: Update to 1.24.0.
add f88ab81 gnu: r-genomeinfodb: Update to 1.28.0.
add 570e80d gnu: r-genomicalignments: Update to 1.28.0.
add 62889b9 gnu: r-genomicfeatures: Update to 1.44.0.
add d491b7e gnu: r-genomicfiles: Update to 1.28.0.
add 1b44202 gnu: r-genomicranges: Update to 1.44.0.
add 214e784 gnu: r-gostats: Update to 2.58.0.
add 330a7fe gnu: r-gseabase: Update to 1.54.0.
add 78eb1fd gnu: r-hpar: Update to 1.34.0.
add 76fc8a5 gnu: r-rhtslib: Update to 1.24.0.
add 94b4e64 gnu: r-impute: Update to 1.66.0.
add 2cbb8e1 gnu: r-interactivedisplaybase: Update to 1.30.0.
add 60b598e gnu: r-keggrest: Update to 1.32.0.
add 595b75e gnu: r-limma: Update to 3.48.0.
add 0b3fd7e gnu: r-methylkit: Update to 1.18.0.
add c966cef gnu: r-mutationalpatterns: Update to 3.2.0.
add d647eb0 gnu: r-msnbase: Update to 2.18.0.
add 00b2174 gnu: r-mzid: Update to 1.30.0.
add 5d37cee gnu: r-organismdbi: Update to 1.34.0.
add 0ec6177 gnu: r-pcamethods: Update to 1.84.0.
add dc67525 gnu: r-protgenerics: Update to 1.24.0.
add 7c45bc9 gnu: r-rbgl: Update to 1.68.0.
add 38fa99c gnu: r-rcas: Update to 1.18.0.
add 2da4ee4 gnu: r-regioner: Update to 1.24.0.
add 51bee5c gnu: r-reportingtools: Update to 2.32.0.
add f2f4ca7 gnu: r-rhdf5filters: Update to 1.4.0.
add e22d743 gnu: r-rsamtools: Update to 2.8.0.
add 5ce21e7 gnu: r-rtracklayer: Update to 1.52.0.
add 58ae27d gnu: r-seqlogo: Update to 1.58.0.
add 76edc5a gnu: r-seqpattern: Update to 1.24.0.
add 15f371c gnu: r-shortread: Update to 1.50.0.
add 8e0dac0 gnu: r-slingshot: Update to 2.0.0.
add 8c0f2d9 gnu: r-structuralvariantannotation: Update to 1.8.0.
add 6eaa922 gnu: r-summarizedexperiment: Update to 1.22.0.
add 81c55df gnu: r-sva: Update to 3.40.0.
add 7728c59 gnu: r-systempiper: Update to 1.26.2.
add ad6ba3d gnu: r-topgo: Update to 2.44.0.
add 2817a8f gnu: r-tximport: Update to 1.20.0.
add c73b9d6 gnu: r-variantannotation: Update to 1.38.0.
add e4a34df gnu: r-vsn: Update to 3.60.0.
add 092d2a8 gnu: r-xvector: Update to 0.32.0.
add 473371d gnu: r-zlibbioc: Update to 1.38.0.
add c686077 gnu: r-geneplotter: Update to 1.70.0.
add 2c9c656 gnu: r-oligoclasses: Update to 1.54.0.
add 359c350 gnu: r-oligo: Update to 1.56.0.
add 371149d gnu: r-qvalue: Update to 2.24.0.
add 941a868 gnu: r-apeglm: Update to 1.14.0.
add 737a228 gnu: r-greylistchip: Update to 1.24.0.
add 27abca9 gnu: r-diffbind: Update to 3.2.1.
add ff7a86f gnu: r-mbkmeans: Update to 1.8.0.
add bed64f7 gnu: r-multtest: Update to 2.48.0.
add fceca5c gnu: r-graph: Update to 1.70.0.
add 5386054 gnu: r-chippeakanno: Update to 3.26.0.
add 202202c gnu: r-matrixgenerics: Update to 1.4.0.
add 0045d21 gnu: r-marray: Update to 1.70.0.
add 09c90d8 gnu: r-cghbase: Update to 1.52.0.
add 1c3e239 gnu: r-cghcall: Update to 2.54.0.
add 11c7a04 gnu: r-qdnaseq: Update to 1.28.0.
add 38f2e39 gnu: r-bayseq: Update to 2.26.0.
add afc59d2 gnu: r-chipcomp: Update to 1.22.0.
add 0443b3c gnu: r-riboprofiling: Update to 1.22.0.
add 43a0a48 gnu: r-riboseqr: Update to 1.26.0.
add ba7757c gnu: r-interactionset: Update to 1.20.0.
add 675f1a9 gnu: r-genomicinteractions: Update to 1.26.0.
add 87d6e68 gnu: r-ctc: Update to 1.66.0.
add 4485bc7 gnu: r-goseq: Update to 1.44.0.
add 089f646 gnu: r-glimma: Update to 2.2.0.
add 481c322 gnu: r-rots: Update to 1.20.0.
add 79c1e03 gnu: r-plgem: Update to 1.64.0.
add c6078d9 gnu: r-inspect: Update to 1.22.0.
add cac2839 gnu: r-dnabarcodes: Update to 1.22.0.
add 618f98c gnu: r-ruvseq: Update to 1.26.0.
add f5ae148 gnu: r-biocneighbors: Update to 1.10.0.
add 8aef574 gnu: r-biocsingular: Update to 1.8.0.
add a10f236 gnu: r-savr: Update to 1.30.0.
add 749cf40 gnu: r-chipexoqual: Update to 1.16.0.
add ac27fee gnu: r-copynumber: Update to 1.32.0.
add 729f6ad gnu: r-dnacopy: Update to 1.66.0.
add 9a67123 gnu: r-ebseq: Update to 1.32.0.
add c63c441 gnu: r-karyoploter: Update to 1.18.0.
add 0c15284 gnu: r-lpsymphony: Update to 1.20.0.
add 2ed5a08 gnu: r-ihw: Update to 1.20.0.
add 79928c5 gnu: r-icobra: Update to 1.20.0.
add 12ec22c gnu: r-mast: Update to 1.18.0.
add 716ac28 gnu: r-monocle: Update to 2.20.0.
add d7390d7 gnu: r-noiseq: Update to 2.36.0.
add 6110243 gnu: r-scdd: Update to 1.16.0.
add 6db7802 gnu: r-scone: Update to 1.16.0.
add 23d3d7a gnu: r-geoquery: Update to 2.60.0.
add 7e29fb9 gnu: r-illuminaio: Update to 0.34.0.
add 18c81e5 gnu: r-siggenes: Update to 1.66.0.
add 136adea gnu: r-bumphunter: Update to 1.34.0.
add a387e1d gnu: r-minfi: Update to 1.38.0.
add 973d334 gnu: r-methylumi: Update to 2.38.0.
add f1635d6 gnu: r-lumi: Update to 2.44.0.
add ac150da gnu: r-linnorm: Update to 2.16.0.
add 0c35cde gnu: r-ioniser: Update to 2.16.0.
add 2c5bba1 gnu: r-tradeseq: Update to 1.6.0.
add 1ade726 gnu: r-varianttools: Update to 1.34.0.
add faf6016 gnu: r-heatplus: Update to 3.0.0.
add 376d9dd gnu: r-gosemsim: Update to 2.18.0.
add dda2915 gnu: r-anota: Update to 1.40.0.
add 1bfe5c2 gnu: r-sigpathway: Update to 1.60.0.
add c8bec0d gnu: r-fgsea: Update to 1.18.0.
add ca136dd gnu: r-dose: Update to 3.18.0.
add 8b0dc8e gnu: r-enrichplot: Update to 1.12.0.
add 2b4c784 gnu: r-clusterprofiler: Update to 4.0.0.
add 2a7532c gnu: r-clusterexperiment: Update to 2.12.0.
add ad3b03d gnu: r-mlinterfaces: Update to 1.72.0.
add 387c023 gnu: r-annaffy: Update to 1.63.1.
add 2aad8aa gnu: r-a4core: Update to 1.40.0.
add 319d9dc gnu: r-a4classif: Update to 1.40.0.
add 751b490 gnu: r-a4preproc: Update to 1.40.0.
add 1217dab gnu: r-a4reporting: Update to 1.40.0.
add 76fb2de gnu: r-a4base: Update to 1.40.0.
add 822024e gnu: r-a4: Update to 1.40.0.
add 33bf7b5 gnu: r-abseqr: Update to 1.10.0.
add 2ace8e3 gnu: r-bacon: Update to 1.20.0.
add f16dcdc gnu: r-rgadem: Update to 2.40.0.
add b532b80 gnu: r-motifdb: Update to 1.34.0.
add 1390f42 gnu: r-motifbreakr: Update to 2.6.0.
add 6e762d2 gnu: r-motifstack: Update to 1.36.0.
add 4627fef gnu: r-genomicscores: Update to 2.4.0.
add 2357a73 gnu: r-atacseqqc: Update to 1.16.0.
add b7f6999 gnu: r-gofuncr: Update to 1.12.0.
add 77a1c4a gnu: r-abaenrichment: Update to 1.22.0.
add 0cef014 gnu: r-annotationtools: Update to 1.66.0.
add 51e7e01 gnu: r-allelicimbalance: Update to 1.30.0.
add 7238b33 gnu: r-aucell: Update to 1.14.0.
add 3e1c585 gnu: r-ebimage: Update to 4.34.0.
add 9866a9b gnu: r-yamss: Update to 1.18.0.
add 7946911 gnu: r-gtrellis: Update to 1.24.0.
add 774e916 gnu: r-somaticsignatures: Update to 2.28.0.
add 995c438 gnu: r-yapsa: Update to 1.18.0.
add a72006c gnu: r-gcrma: Update to 2.64.0.
add 8d6a721 gnu: r-quantro: Update to 1.26.0.
add 4a9e3d2 gnu: r-yarn: Update to 1.18.0.
add 48737e9 gnu: r-roar: Update to 1.28.0.
add ef30a43 gnu: r-massspecwavelet: Update to 1.58.0.
add d463b40 gnu: r-xcms: Update to 3.14.0.
add 2da5ef4 gnu: r-wrench: Update to 1.10.0.
add e91b408 gnu: r-wiggleplotr: Update to 1.16.0.
add 3a7ad7f gnu: r-widgettools: Update to 1.70.0.
add 34137c2 gnu: r-webbioc: Update to 1.64.0.
add fc400d1 gnu: r-zinbwave: Update to 1.14.1.
add 6145252 gnu: r-zfpkm: Update to 1.14.0.
add 25ba2d3 gnu: r-rbowtie2: Update to 1.14.0.
add 7cf4911 gnu: r-progeny: Update to 1.14.0.
add 1dce605 gnu: r-arrmnormalization: Update to 1.32.0.
add 46fc033 gnu: r-biocfilecache: Update to 2.0.0.
add 6929565 gnu: r-iclusterplus: Update to 1.28.0.
add 0e74fff gnu: r-rbowtie: Update to 1.32.0.
add eca0820 gnu: r-sgseq: Update to 1.26.0.
add 274b1e2 gnu: r-rhisat2: Update to 1.8.0.
add f039c22 gnu: r-quasr: Update to 1.32.0.
add ec78a01 gnu: r-rqc: Update to 1.26.0.
add f9c306e gnu: r-birewire: Update to 3.24.0.
add 3d9b638 gnu: r-multidataset: Update to 1.20.0.
add 3501292 gnu: r-ropls: Update to 1.24.0.
add 28472b6 gnu: r-biosigner: Update to 1.20.0.
add 758c1cd gnu: r-annotatr: Update to 1.18.0.
add db56495 gnu: r-rsubread: Update to 2.6.1.
add 6a7589d gnu: r-flowutils: Update to 1.56.0.
add 4299d97 gnu: r-consensusclusterplus: Update to 1.56.0.
add 19855b5 gnu: r-flowcore: Update to 2.4.0.
add 5e49dfd gnu: r-flowmeans: Update to 1.52.0.
add 417b410 gnu: r-ggcyto: Update to 1.20.0.
add 57a41cd gnu: r-flowviz: Update to 1.56.0.
add c474b47 gnu: r-flowclust: Update to 3.30.0.
add a1557ad gnu: r-rprotobuflib: Update to 2.4.0.
add 6489371 gnu: r-flowstats: Update to 4.4.0.
add 53c0417 gnu: r-opencyto: Update to 2.4.0.
add 9ed2ec5 gnu: r-flowsom: Update to 2.0.0.
add 480dcf3 gnu: r-mixomics: Update to 6.16.0.
add 9c0b691 gnu: r-depecher: Update to 1.8.0.
add f9049ad gnu: r-rcistarget: Update to 1.12.0.
add cec7972 gnu: r-cicero: Update to 1.10.0.
add d37ae38 gnu: r-circrnaprofiler: Update to 1.6.0.
add bb3ef48 gnu: r-genie3: Update to 1.14.0.
add 125ffdf gnu: r-roc: Update to 1.68.0.
add d0c3644 gnu: r-watermelon: Update to 1.36.0.
add 0cc4deb gnu: r-gdsfmt: Update to 1.28.0.
add 988337d gnu: r-bigmelon: Update to 1.18.0.
add 0615d39 gnu: r-seqbias: Update to 1.40.0.
add 66e45a9 gnu: r-reqon: Update to 1.38.0.
add 99496a1 gnu: r-wavcluster: Update to 2.26.0.
add 7a287bc gnu: r-timeseriesexperiment: Update to 1.10.0.
add 27e0600 gnu: r-variantfiltering: Update to 1.28.0.
add 2ca9f4f gnu: r-variancepartition: Update to 1.22.0.
add 58f2abf gnu: r-htqpcr: Update to 1.46.0.
add 56ec3a6 gnu: r-unifiedwmwqpcr: Update to 1.28.0.
add e4087ae gnu: r-universalmotif: Update to 1.10.1.
add 51d637a gnu: r-bgmix: Update to 1.52.0.
add bacd432 gnu: r-bgx: Update to 1.58.0.
add 3c64554 gnu: r-bhc: Update to 1.44.0.
add 49403e8 gnu: r-bicare: Update to 1.50.0.
add 58b8ed9 gnu: r-bifet: Update to 1.12.0.
add 92f5efa gnu: r-rsbml: Update to 2.50.0.
add d518858 gnu: r-hypergraph: Update to 1.64.0.
add 302929d gnu: r-hyperdraw: Update to 1.44.0.
add 90eb7ae gnu: r-biggr: Update to 1.28.0.
add 8a8f200 gnu: r-bigpint: Update to 1.8.0.
add 02ec364 gnu: r-chemminer: Update to 3.44.0.
add 7c990fb gnu: r-bioassayr: Update to 1.30.0.
add dc28787 gnu: r-biobroom: Update to 1.24.0.
add a95a14c gnu: r-graphite: Update to 1.38.0.
add f218b9b gnu: r-reactomepa: Update to 1.36.0.
add 834a6db gnu: r-ebarrays: Update to 2.56.0.
add cd9af23 gnu: r-biocgraph: Update to 1.54.0.
add 6513592 gnu: r-biocstyle: Update to 2.20.0.
add 1e2c0e8 gnu: r-biocviews: Update to 1.60.0.
add 28613e1 gnu: r-experimenthub: Update to 2.0.0.
add 37f824c gnu: r-grohmm: Update to 1.26.0.
add e7b465e gnu: r-multiassayexperiment: Update to 1.18.0.
add 4faded2 gnu: r-bioconcotk: Update to 1.12.0.
add 2023951 gnu: r-biocor: Update to 1.16.0.
add e9e4f65 gnu: r-biocpkgtools: Update to 1.10.1.
add e828fa2 gnu: r-biocset: Update to 1.6.0.
add 36f51f8 gnu: r-biocworkflowtools: Update to 1.18.0.
add db46064 gnu: r-biodist: Update to 1.64.0.
add 5d611d3 gnu: r-pcatools: Update to 2.4.0.
add 06dd2fd gnu: r-rgreat: Update to 1.24.0.
add 3b19239 gnu: r-m3c: Update to 1.14.0.
add a9f203b gnu: r-icens: Update to 1.64.0.
add a78daaa gnu: r-preprocesscore: Update to 1.54.0.
add 5565b8b gnu: r-s4vectors: Update to 0.30.0.
add 64b03c6 gnu: r-rgraphviz: Update to 2.36.0.
add 914bd41 gnu: r-fithic: Update to 1.18.0.
add dbb929b gnu: r-hitc: Update to 1.36.0.
add 370d020 gnu: r-beachmat: Update to 2.8.0.
add a92a277 gnu: r-cner: Update to 1.28.0.
add 0b6b42b gnu: r-tfbstools: Update to 1.30.0.
add 56a2dcf gnu: r-motifmatchr: Update to 1.14.0.
add 71e3929 gnu: r-chromvar: Update to 1.14.0.
add b21a73c gnu: r-singlecellexperiment: Update to 1.14.1.
add 851894f gnu: r-scuttle: Update to 1.2.0.
add d9755a2 gnu: r-scater: Update to 1.20.0.
add 015ba64 gnu: r-scran: Update to 1.20.1.
add 360477c gnu: r-sparsematrixstats: Update to 1.4.0.
add 47e291d gnu: r-delayedmatrixstats: Update to 1.14.0.
add aaf0958 gnu: r-mscoreutils: Update to 1.4.0.
add b5a3877 gnu: r-biocio: Update to 1.2.0.
add e501608 gnu: r-msmseda: Update to 1.30.0.
add 2fe8673 gnu: r-msmstests: Update to 1.30.0.
add 8ad54dc gnu: r-catalyst: Update to 1.16.0.
add bd6d000 gnu: r-erma: Update to 1.8.0.
add 46b7d19 gnu: r-ggbio: Update to 1.40.0.
add bdfa117 gnu: r-gviz: Update to 1.36.0.
add a06d13b gnu: r-gwascat: Update to 2.24.0.
add 2860208 gnu: r-kegggraph: Update to 1.52.0.
add b4cea45 gnu: r-ldblock: Update to 1.22.0.
add 8fa5a4d gnu: r-pathview: Update to 1.32.0.
add 3e2052e gnu: r-snpstats: Update to 1.42.0.
add 3a5642d gnu: r-chromstar: Update to 1.18.0.
add abe7628 gnu: r-guitar: Update to 2.8.0.
add 8f12002 gnu: r-sushi: Update to 1.30.0.
add c128d4f gnu: sbcl-cmd: Update to 20210531.
add c2b6d36 gnu: pari-gp: Use patched texlive-amsfonts.
add 701a115 gnu: dblatex: Use patched texlive-amsfonts.
add 11caa5f gnu: emacs-auctex: Use patched texlive-amsfonts.
add 41bbbd5 gnu: asymptote: Use patched texlive-amsfonts.
add 232bdb9 gnu: gnuradio: Use patched texlive-amsfonts.
add af8a528 gnu: libosmo-dsp: Use patched texlive-amsfonts.
add d717515 gnu: python-numpy-documentation: Use patched texlive-amsfonts.
add ace9740 gnu: python-matplotlib-documentation: Use patched
texlive-amsfonts.
add 45aae51 gnu: python-ipython-documentation: Use patched
texlive-amsfonts.
add f9ef881 gnu: python-pypandoc: Use patched texlive-amsfonts.
add ba9cbb6 gnu: Add libfec.
add 573f777 gnu: liquid-dsp: Add support for more error correction codes.
add 3a8d0ef gnu: liquid-dsp: Remove static library.
add f9a7a36 gnu: liquid-dsp: Remove unused input.
add ac9da35 gnu: emacs-webfeeder: Update to 1.1.2.
add bbf5427 gnu: Add emacs-hgignore-mode.
add 612e5b8 gnu: Add emacs-hg-histedit.
add b61ee34 gnu: Add emacs-djvu3.
add fec881e gnu: Add emacs-kibit-helper.
add dfdcd9d news: Add 'de' translation.
add c6d4f97 gnu: Add emacs-clojure-snippets.
add 0a4b2da gnu: Add emacs-anakondo.
add 00f8451 gnu: Add emacs-flymake-quickdef.
add 087fbcf gnu: Add emacs-flymake-kondor.
add 11f1834 gnu: Add emacs-vscode-dark-plus.
add fb41cc6 gnu: emacs-leaf: Update to 4.4.8.
add bdab742 gnu: emacs-all-the-icons: Update to 5.0.0.
add bb7706d gnu: emacs-undercover: Update to 0.8.1.
add 9da9093 gnu: rosegarden: Update to 21.06.
add 20d9535 gnu: nsis: Respect SOURCE-DATE-EPOCH for reproducibility
add 38eaba9 gnu: giac: Update to 1.7.0-11.
add de1b8f7 gnu: wireshark: Update to 3.4.6.
add 9412762 gnu: thermald: Update to 2.4.5.
add ddd871c gnu: thermald: Compile with -Werror again.
add 1e1a274 gnu: nnn: Update to 4.1.1.
add 49dd606 gnu: nnn: Use #:make-flags over Makefile patching.
add 605a40b gnu: nnn: Remove marketing hyperbole.
add c6e36ee gnu: ispell: Update to 3.4.04.
add d22b1b2 gnu: iperf: Update to 3.10.1.
add debcc76 gnu: qca: Update to 2.3.3.
add 0339829 gnu: wireshark: Support more compression algorithms.
add f1a4b85 gnu: wireshark: Inspect HTTP/2 headers.
add ddc9da2 gnu: faudio: Update to 21.06.
add cd6c61f gnu: nzbget: Update to 21.1.
add a80cde0 gnu: console-setup: Update to 1.203.
add c107a30 gnu: wgetpaste: Don't install LICENSE file twice.
add 2e97761 gnu: wgetpaste: Build from Git.
add bdd2970 gnu: wgetpaste: Update to 2.32.
add febfd4c gnu: rust-structopt-derive-0.4: Update to 0.4.14.
add 38233e7 gnu: rust-structopt-0.3: Update to 0.3.21.
add 51f5292 gnu: Add rust-progressing-3.
add ed30001 gnu: Add rust-nitrokey-0.9.
add 9c92fb8 gnu: Add rust-merge-derive-0.1.
add 7b5f5aa gnu: Add rust-merge-0.1.
add add0c5f gnu: Add rust-envy-0.4.
add 3463559 gnu: Add rust-base32-0.4.
add 7905b90 gnu: Add nitrocli.
add f1e0e5f gnu: icedove: Update to 78.11.0 [fixes CVE-2021-29967].
add 2ac5e07 profiles: 'check-for-collisions' filters out more
non-collisions upfront.
add aaafd19 hg-download: Add helpers for defining packages.
add 23ab8d4 gnu: gparted: Update to 1.3.0.
add 404f614 gnu: Add lxcfs.
add 08b55f1 gnu: Add libdqlite.
add 524c641 gnu: Add soapysdr.
add 59ce827 gnu: Add soapyhackrf.
add ee586c9 gnu: Add soapyrtlsdr.
add 0855fd3 gnu: Add soapyairspyhf.
add 7a5d397 gnu: welle-io: Add SoapySDR support.
add 60cd50a gnu: rtl-433: Add SoapySDR support.
add 9caf711 gnu: gr-osmosdr: Add SoapySDR support.
add 7846964 gnu: Add python-sparse.
add d1e7b50 gnu: python-cooler: Update to 0.8.11.
add 3a9923d gnu: rust-v-frame-0.2: Update to 0.2.1.
add be59ed4 gnu: Add rust-rustfix-0.5.
add 7ea0a2e gnu: Add rust-serde-ignored-0.1.
add 1c47e77 gnu: Add rust-rustc-workspace-hack-1.
add 41e6f47 gnu: Add rust-opener-0.4.
add e6c5d08 gnu: Add rust-derive-arbitrary-1.
add 6661e83 gnu: Add rust-arbitrary-1.
add 014d0ee gnu: rust-jobserver-0.1: Update to 0.1.22.
add b36299c gnu: Add rust-array-ops-0.1.
add 94b4114 gnu: Add rust-bitmaps-2.
add 269e638 gnu: Add rust-refpool-0.4.
add 2394bd7 gnu: Add rust-sized-chunks-0.6.
add 3de4953 gnu: rust-digest-0.8: Fix the version of its
rust-generic-array input.
add 3cc41bc gnu: Add rust-twox-hash-1.
add a38cb9c gnu: Add rust-metrohash-1.
add 93f2fde4 gnu: Add rust-im-rc-15.
add b96fd1a gnu: Add rust-home-0.5.
add bb162c1 gnu: Add rust-git2-curl-0.14.
add b0c53f5 gnu: rust-libgit2-sys-0.12: Update to 0.12.21+1.1.0.
add 8550b41 gnu: rust-libgit2-sys-0.7: Remove unused package.
add 0fbaf75 gnu: rust-git2-0.13: Update to 0.13.20.
add 4acd121 gnu: Add rust-fwdansi-1.
add 2e79f84 gnu: rust-filetime-0.2: Update to 0.2.14.
add bc11792 gnu: Add rust-crypto-hash-0.3.
add b5a68bd gnu: Add rust-crates-io-0.33.
add c5f0ce2 gnu: Add rust-cargo-platform-0.1.
add 25c4ad2 gnu: Add rust-bytesize-1.
add aacc47e gnu: Add rust-commoncrypto-sys-0.2.
add 0ededfa gnu: Add rust-commoncrypto-0.2.
add 9fed441 gnu: Add rust-cargo-0.53.
add b95e43b gnu: rust-serde-json-1: Update to 1.0.64.
add 62b1c47 gnu: rust-cargo-c: Update to 0.8.1+cargo-0.53.
add 636e478 gnu: rav1e: Update to 0.4.1.
add 916bbf5 gnu: Add rust-fallible-collections-0.4.
add 93baaf5 gnu: Add rust-bitreader-0.3.
add ba047d8 gnu: Add rust-avif-parse-0.13.
add 1c5781b gnu: rust-ravif: Use rav1e instead of rust-rav1e.
add d8c06d8 gnu: Remove rust-rav1e.
add f02b9d6 gnu: ffmpeg: Update to 4.4.
add 4d0030e gnu: diffoscope: Update to 177.
add 30eccef gnu: Add ffmpeg-4.3.
add 6a0d0c3 gnu: libopenshot: Use ffmpeg-4.3.
add a180792 gnu: ppsspp: Update to 1.11.3-1.69fa207.
add 544a980 gnu: czmq: Re-enable previously failing tests, fixed in 4.2.1.
add 876f407 gnu: libvpx: Update to 1.10.0.
add 7fd2c9a gnu: msgpack: Update to 3.3.0.
add 36fd42d gnu: emacs-elfeed-score: Update to 0.7.9.
add 04beee1 gnu: emacs-company-irony: Update to 1.1.1.
add da28abc gnu: sdrangel: Add SoapySDR support.
add 1fd8819 gnu: poke: Update to 1.3.
add b65c02e gnu: freebayes: Update to 1.3.5.
add db8ea15 gnu: icedove-wayland: Refactor as a wrapper around icedove.
add ed057e3 gnu: tig: Update to 2.5.4.
add f7331f0 doc: Pluralize "package."
add 7705647 gnu: strongswan: Configure more sensible defaults.
add b6affc5 gnu: xterm: Update to 367.
add db6ff6d gnu: xf86-input-libinput: Fix licence information.
add b2122b0 gnu: xf86-input-libinput: Update to 1.0.1.
add b477a9f gnu: ocaml-integers: Update to 0.4.0.
add 0f62ea0 gnu: ocaml-ctypes: Update to 0.18.0.
add 5a4acc5 gnu: ocaml-ctypes: Make ocaml-integers a propagated input.
add 0f5f8d4 gnu: ocaml-lwt: Make libev a propagated input.
add b3bc748 gnu: ocaml-lwt: Update to 5.4.0.
add 99ed037 gnu: ocaml4.07-gen: Update to 0.5.3.
add 4b6e1fb gnu: Add ocaml-gen.
add 8f5aa87 gnu: Add ocaml-stdio.
add cfa65d7 gnu: Add ocaml-compiler-libs.
add 3c88991 gnu: ocaml-migrate-parsetree: Update to 2.1.0.
add 2626832 gnu: Add ocaml-ppxlib.
add 59a39ec gnu: Add ocaml-sedlex.
add ec31363 gnu: Add ocaml-uunf.
add c729d98 gnu: Add ocaml-ppx-sexp-conv.
add 6f4f9c4 gnu: Add ocaml-bigstringaf.
add 3649c56 gnu: Add ocaml-ppx-let.
add 5b61a14 gnu: Add ocaml-syntax-shims.
add c35fd03 gnu: Add ocaml-ppx-compare.
add 7cf518e gnu: Add ocaml-ppx-here.
add 52dc188 gnu: Add ocaml-ppx-cold.
add d8fed76 gnu: Add python-asn1tools.
add 5d4bd2e gnu: Add python-pytest-mp.
add 3c401ca gnu: Add matterbridge.
add d00713d gnu: git: Update to 2.32.0.
add e2ad110 gnu: vlc: Update to 3.0.14.
add 82b0e27 lint: tests-true: Check if tests are enabled when
cross-compiling.
add a068ed6 scripts: substitute: Cache connection when looking for
narinfos.
new 8d59c26 Merge branch 'master' into core-updates
The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "add" were already present in the repository and have only
been added to this reference.
Summary of changes:
Makefile.am | 3 +
configure.ac | 6 +-
doc/contributing.texi | 36 +-
doc/guix.texi | 58 +-
etc/guix-daemon.cil.in | 7 +-
etc/news.scm | 35 +
gnu/bootloader/u-boot.scm | 7 +-
gnu/build/linux-boot.scm | 16 +-
gnu/local.mk | 13 +-
gnu/machine/ssh.scm | 41 +-
gnu/packages/admin.scm | 42 +-
gnu/packages/algebra.scm | 4 +-
gnu/packages/animation.scm | 78 +-
gnu/packages/aspell.scm | 4 +-
gnu/packages/astronomy.scm | 4 +-
gnu/packages/audio.scm | 32 +-
gnu/packages/axoloti.scm | 5 +
gnu/packages/benchmark.scm | 19 +-
gnu/packages/bioconductor.scm | 4065 +++++++++++++++-----
gnu/packages/bioinformatics.scm | 3028 +++++----------
gnu/packages/check.scm | 9 +-
gnu/packages/chromium.scm | 31 +-
gnu/packages/ci.scm | 8 +-
gnu/packages/cluster.scm | 45 +-
gnu/packages/compression.scm | 14 +-
gnu/packages/cran.scm | 904 ++++-
gnu/packages/crates-graphics.scm | 119 +-
gnu/packages/crates-io.scm | 1664 +++++++-
gnu/packages/crypto.scm | 12 +-
gnu/packages/cryptsetup.scm | 26 +-
gnu/packages/curl.scm | 15 +
gnu/packages/databases.scm | 20 +-
gnu/packages/dictionaries.scm | 5 +-
gnu/packages/diffoscope.scm | 4 +-
gnu/packages/disk.scm | 50 +-
gnu/packages/django.scm | 17 +-
gnu/packages/dns.scm | 3 +
gnu/packages/education.scm | 38 +
gnu/packages/emacs-xyz.scm | 1660 ++++----
gnu/packages/emacs.scm | 12 +-
gnu/packages/emulators.scm | 404 +-
gnu/packages/engineering.scm | 4 +-
gnu/packages/entr.scm | 5 +-
gnu/packages/file-systems.scm | 37 +-
gnu/packages/fltk.scm | 6 +-
gnu/packages/fonts.scm | 28 +-
gnu/packages/fpga.scm | 7 +-
gnu/packages/freeipmi.scm | 6 +-
gnu/packages/ftp.scm | 4 +-
gnu/packages/game-development.scm | 4 +-
gnu/packages/games.scm | 72 +-
gnu/packages/gcc.scm | 4 +-
gnu/packages/gnome.scm | 20 +-
gnu/packages/gnucash.scm | 12 +-
gnu/packages/gnuzilla.scm | 63 +-
gnu/packages/guile-xyz.scm | 39 +-
gnu/packages/guile.scm | 4 +-
gnu/packages/hardware.scm | 4 +-
gnu/packages/i2p.scm | 74 +-
gnu/packages/icu4c.scm | 16 +
gnu/packages/image-processing.scm | 5 +
gnu/packages/image.scm | 4 +-
gnu/packages/installers.scm | 3 +-
gnu/packages/jami.scm | 13 +-
gnu/packages/julia-jll.scm | 2667 +++++++++++++
gnu/packages/julia-xyz.scm | 1334 +++++--
gnu/packages/kde.scm | 4 +-
gnu/packages/libreoffice.scm | 4 +-
gnu/packages/linux.scm | 77 +-
gnu/packages/lisp-xyz.scm | 458 ++-
gnu/packages/lisp.scm | 18 +-
gnu/packages/llvm.scm | 10 +-
gnu/packages/lxqt.scm | 211 +-
gnu/packages/mail.scm | 19 +-
gnu/packages/markup.scm | 6 +-
gnu/packages/maths.scm | 179 +-
gnu/packages/mc.scm | 32 +-
gnu/packages/mes.scm | 5 +-
gnu/packages/messaging.scm | 41 +-
gnu/packages/monitoring.scm | 30 +-
gnu/packages/mpd.scm | 4 +-
gnu/packages/mtools.scm | 4 +-
gnu/packages/music.scm | 93 +-
gnu/packages/networking.scm | 190 +-
gnu/packages/ocaml.scm | 789 ++--
gnu/packages/package-management.scm | 46 +-
gnu/packages/parallel.scm | 36 +-
gnu/packages/patches/amule-crypto-6.patch | 45 -
...s-geiser-autoload-activate-implementation.patch | 26 -
.../patches/emacs-geiser-guile-auto-activate.patch | 34 -
gnu/packages/patches/freebayes-devendor-deps.patch | 152 -
.../lksctp-tools-1.0.18-fix-header-file-name.patch | 32 -
.../patches/minimap2-aarch64-support.patch | 52 -
.../patches/mosaicatcher-unbundle-htslib.patch | 49 +
gnu/packages/patches/nsis-source-date-epoch.patch | 23 +
.../patches/ppsspp-disable-upgrade-and-gold.patch | 148 +-
gnu/packages/patches/wgetpaste-update-bpaste.patch | 27 -
gnu/packages/pep.scm | 143 +-
gnu/packages/perl.scm | 156 +-
gnu/packages/php.scm | 4 +-
gnu/packages/protobuf.scm | 10 +-
gnu/packages/python-check.scm | 39 +-
gnu/packages/python-science.scm | 86 +
gnu/packages/python-web.scm | 40 +-
gnu/packages/python-xyz.scm | 391 +-
gnu/packages/python.scm | 4 +-
gnu/packages/racket.scm | 6 +-
gnu/packages/radio.scm | 434 ++-
gnu/packages/readline.scm | 28 +-
gnu/packages/rsync.scm | 41 +-
gnu/packages/rust-apps.scm | 67 +-
gnu/packages/security-token.scm | 46 +
gnu/packages/sequoia.scm | 74 -
gnu/packages/serialization.scm | 4 +-
gnu/packages/shells.scm | 4 +-
gnu/packages/smalltalk.scm | 15 +-
gnu/packages/sphinx.scm | 56 +-
gnu/packages/statistics.scm | 163 +-
gnu/packages/suckless.scm | 8 +-
gnu/packages/telephony.scm | 6 +-
gnu/packages/text-editors.scm | 11 +-
gnu/packages/tls.scm | 23 +-
gnu/packages/tryton.scm | 239 +-
gnu/packages/version-control.scm | 14 +-
gnu/packages/video.scm | 125 +-
gnu/packages/vim.scm | 2 +-
gnu/packages/virtualization.scm | 30 +
gnu/packages/vnc.scm | 4 +-
gnu/packages/web-browsers.scm | 22 +-
gnu/packages/web.scm | 28 +-
gnu/packages/wget.scm | 20 +-
gnu/packages/xdisorg.scm | 79 +-
gnu/packages/xiph.scm | 39 +-
gnu/packages/xml.scm | 21 +-
gnu/packages/xorg.scm | 31 +-
gnu/services/cuirass.scm | 12 +-
gnu/services/dns.scm | 10 +-
gnu/services/networking.scm | 3 +-
gnu/services/vpn.scm | 4 +-
gnu/tests/linux-modules.scm | 13 +-
gnu/tests/web.scm | 14 +-
guix/build-system/r.scm | 2 +-
guix/ci.scm | 25 +-
guix/download.scm | 1 +
guix/git-download.scm | 79 +-
guix/gnu-maintenance.scm | 32 +-
guix/hg-download.scm | 24 +-
guix/import/cran.scm | 4 +-
guix/import/egg.scm | 352 ++
guix/import/hackage.scm | 27 +-
guix/import/opam.scm | 4 +-
guix/licenses.scm | 8 +-
guix/lint.scm | 171 +-
guix/profiles.scm | 5 +-
guix/progress.scm | 16 +-
guix/scripts/archive.scm | 3 +
guix/scripts/build.scm | 3 +
guix/scripts/copy.scm | 9 +-
guix/scripts/deploy.scm | 12 +-
guix/scripts/edit.scm | 4 +-
guix/scripts/environment.scm | 3 +
guix/scripts/graph.scm | 5 +-
guix/scripts/import.scm | 4 +-
guix/scripts/import/{pypi.scm => egg.scm} | 22 +-
guix/scripts/package.scm | 8 +
guix/scripts/publish.scm | 160 +-
guix/scripts/substitute.scm | 11 +-
guix/store.scm | 16 +-
guix/swh.scm | 20 +-
guix/ui.scm | 60 +-
po/guix/POTFILES.in | 3 +
tests/egg.scm | 132 +
tests/gnu-maintenance.scm | 3 +-
tests/hackage.scm | 7 +-
tests/lint.scm | 55 +-
tests/opam.scm | 4 +-
176 files changed, 16600 insertions(+), 7105 deletions(-)
create mode 100644 gnu/packages/julia-jll.scm
delete mode 100644 gnu/packages/patches/amule-crypto-6.patch
delete mode 100644
gnu/packages/patches/emacs-geiser-autoload-activate-implementation.patch
delete mode 100644 gnu/packages/patches/emacs-geiser-guile-auto-activate.patch
delete mode 100644 gnu/packages/patches/freebayes-devendor-deps.patch
delete mode 100644
gnu/packages/patches/lksctp-tools-1.0.18-fix-header-file-name.patch
delete mode 100644 gnu/packages/patches/minimap2-aarch64-support.patch
create mode 100644 gnu/packages/patches/mosaicatcher-unbundle-htslib.patch
create mode 100644 gnu/packages/patches/nsis-source-date-epoch.patch
delete mode 100644 gnu/packages/patches/wgetpaste-update-bpaste.patch
create mode 100644 guix/import/egg.scm
copy guix/scripts/import/{pypi.scm => egg.scm} (84%)
create mode 100644 tests/egg.scm
- branch core-updates updated (e7f0835 -> 8d59c26),
guix-commits <=