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branch master updated: gnu: python-mappy: Move to (gnu packages bioinfor
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guix-commits |
Subject: |
branch master updated: gnu: python-mappy: Move to (gnu packages bioinformatics). |
Date: |
Tue, 08 Jun 2021 02:59:47 -0400 |
This is an automated email from the git hooks/post-receive script.
efraim pushed a commit to branch master
in repository guix.
The following commit(s) were added to refs/heads/master by this push:
new 61bce4d gnu: python-mappy: Move to (gnu packages bioinformatics).
61bce4d is described below
commit 61bce4d143b8e1c077b6a9e10e24138ae2f73600
Author: Efraim Flashner <efraim@flashner.co.il>
AuthorDate: Mon Jun 7 16:06:53 2021 +0300
gnu: python-mappy: Move to (gnu packages bioinformatics).
* gnu/packages/python-xyz.scm (python-mappy): Move to ...
* gnu/packages/bioinformatics.scm: ... here.
---
gnu/packages/bioinformatics.scm | 22 ++++++++++++++++++++++
gnu/packages/python-xyz.scm | 22 ----------------------
2 files changed, 22 insertions(+), 22 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index a4a6678..7a47943 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10935,6 +10935,28 @@ cases include:
@end enumerate\n")
(license license:expat)))
+(define-public python-mappy
+ (package
+ (name "python-mappy")
+ (version "2.18")
+ (source (origin
+ (method url-fetch)
+ (uri (pypi-uri "mappy" version))
+ (sha256
+ (base32
+ "1a05p7rkmxa6qhm108na8flzj2v45jab06drk59kzk1ip2sgvzqq"))))
+ (build-system python-build-system)
+ (native-inputs
+ `(("python-cython" ,python-cython)))
+ (inputs
+ `(("zlib" ,zlib)))
+ (home-page "https://github.com/lh3/minimap2")
+ (synopsis "Python binding for minimap2")
+ (description "This package provides a convenient interface to minimap2,
+a fast and accurate C program to align genomic and transcribe nucleotide
+sequences.")
+ (license license:expat)))
+
(define-public miniasm
(package
(name "miniasm")
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm
index 7b5594f..998c5e9 100644
--- a/gnu/packages/python-xyz.scm
+++ b/gnu/packages/python-xyz.scm
@@ -2304,28 +2304,6 @@ information created by most SVG editors. Optimization
options are typically
lossless but can be tweaked for more aggressive cleaning.")
(license license:asl2.0)))
-(define-public python-mappy
- (package
- (name "python-mappy")
- (version "2.18")
- (source (origin
- (method url-fetch)
- (uri (pypi-uri "mappy" version))
- (sha256
- (base32
- "1a05p7rkmxa6qhm108na8flzj2v45jab06drk59kzk1ip2sgvzqq"))))
- (build-system python-build-system)
- (native-inputs
- `(("python-cython" ,python-cython)))
- (inputs
- `(("zlib" ,zlib)))
- (home-page "https://github.com/lh3/minimap2")
- (synopsis "Python binding for minimap2")
- (description "This package provides a convenient interface to minimap2,
-a fast and accurate C program to align genomic and transcribe nucleotide
-sequences.")
- (license license:expat)))
-
(define-public python-mechanize
(package
(name "python-mechanize")
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