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133/133: gnu: r-gdsfmt: Adjust bad substitution.
From: |
guix-commits |
Subject: |
133/133: gnu: r-gdsfmt: Adjust bad substitution. |
Date: |
Thu, 30 Sep 2021 06:43:41 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit b28cd884b861f623d9691c58e4eb17ae5cf38117
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Sep 30 00:10:33 2021 +0200
gnu: r-gdsfmt: Adjust bad substitution.
* gnu/packages/bioconductor.scm (r-gdsfmt)[source]: Include
beginning-of-line
anchor in substitution regular expression.
---
gnu/packages/bioconductor.scm | 5 ++---
1 file changed, 2 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1e5777d..4cbffac 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -10548,7 +10548,7 @@ metrics, with methods for objects produced by the
@code{methylumi} and
(substitute* "src/Makevars"
(("all: \\$\\(SHLIB\\)") "all:")
(("\\$\\(SHLIB\\): liblzma.a") "")
- (("(ZLIB|LZ4)/.*") "")
+ (("^ (ZLIB|LZ4)/.*") "")
(("CoreArray/dVLIntGDS.cpp.*")
"CoreArray/dVLIntGDS.cpp")
(("CoreArray/dVLIntGDS.o.*")
@@ -10557,8 +10557,7 @@ metrics, with methods for objects produced by the
@code{methylumi} and
"PKG_LIBS = -llz4"))
(substitute* "src/CoreArray/dStream.h"
(("include \"../(ZLIB|LZ4|XZ/api)/(.*)\"" _ _ header)
- (string-append "include <" header ">")))
- #t))))
+ (string-append "include <" header ">")))))))
(properties `((upstream-name . "gdsfmt")))
(build-system r-build-system)
(inputs
- 101/133: gnu: r-openssl: Update to 1.4.5., (continued)
- 101/133: gnu: r-openssl: Update to 1.4.5., guix-commits, 2021/09/30
- 114/133: gnu: r-glinternet: Update to 1.0.12., guix-commits, 2021/09/30
- 107/133: gnu: r-e1071: Update to 1.7-9., guix-commits, 2021/09/30
- 66/133: gnu: r-rgdal: Update to 1.5-27., guix-commits, 2021/09/30
- 113/133: gnu: r-pbapply: Update to 1.5-0., guix-commits, 2021/09/30
- 106/133: gnu: r-rngtools: Update to 1.5.2., guix-commits, 2021/09/30
- 112/133: gnu: r-rrcov: Update to 1.6-0., guix-commits, 2021/09/30
- 122/133: gnu: r-chippeakanno: Update to 3.26.4., guix-commits, 2021/09/30
- 125/133: gnu: r-clusterprofiler: Update to 4.0.5., guix-commits, 2021/09/30
- 120/133: gnu: r-genomicfeatures: Update to 1.44.2., guix-commits, 2021/09/30
- 133/133: gnu: r-gdsfmt: Adjust bad substitution.,
guix-commits <=
- 72/133: gnu: r-openmx: Update to 2.19.8., guix-commits, 2021/09/30
- 87/133: gnu: r-rgeos: Update to 0.5-8., guix-commits, 2021/09/30
- 90/133: gnu: r-zoolog: Update to 0.4.1., guix-commits, 2021/09/30
- 104/133: gnu: r-rmarkdown: Update to 2.11., guix-commits, 2021/09/30
- 110/133: gnu: r-sfsmisc: Update to 1.1-12., guix-commits, 2021/09/30
- 129/133: gnu: r-timeseriesexperiment: Update to 1.10.1., guix-commits, 2021/09/30
- 58/133: gnu: r-europepmc: Update to 0.4.1., guix-commits, 2021/09/30
- 65/133: gnu: r-rhpcblasctl: Update to 0.21-247., guix-commits, 2021/09/30
- 69/133: gnu: r-lhs: Update to 1.1.3., guix-commits, 2021/09/30
- 76/133: gnu: r-flexsurv: Update to 2.1., guix-commits, 2021/09/30