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05/06: gnu: python-biopython: Update to 1.76.


From: guix-commits
Subject: 05/06: gnu: python-biopython: Update to 1.76.
Date: Thu, 21 Oct 2021 09:41:50 -0400 (EDT)

rekado pushed a commit to branch master
in repository guix.

commit 10664fcc8c557a33a6670db8fb2ecec8eaa68d0d
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Oct 21 13:33:20 2021 +0000

    gnu: python-biopython: Update to 1.76.
    
    * gnu/packages/bioinformatics.scm (python-biopython): Update to 1.76.
    (python-biopython-1.73): New variable.
    (instrain)[inputs]: Replace python-biopython with python-biopython-1.73.
---
 gnu/packages/bioinformatics.scm | 18 +++++++++++++++---
 1 file changed, 15 insertions(+), 3 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 5c4d5ab..2593dc1 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1245,14 +1245,14 @@ sequencing.")
 (define-public python-biopython
   (package
     (name "python-biopython")
-    (version "1.73")
+    (version "1.76")
     (source (origin
               (method url-fetch)
               ;; use PyPi rather than biopython.org to ease updating
               (uri (pypi-uri "biopython" version))
               (sha256
                (base32
-                "1q55jhf76z3k6is3psis0ckbki7df26x7dikpcc3vhk1vhkwribh"))))
+                "0wlch9xpa0fpgjzyxi6jsfca6iakaq9a05927xg8vqnmvaccnwrq"))))
     (build-system python-build-system)
     (arguments
      `(#:phases
@@ -1273,6 +1273,18 @@ dealing with alignments; code making it easy to split up 
parallelizable tasks
 into separate processes; and more.")
     (license (license:non-copyleft "http://www.biopython.org/DIST/LICENSE";))))
 
+(define-public python-biopython-1.73
+  (package
+    (inherit python-biopython)
+    (version "1.73")
+    (source (origin
+              (method url-fetch)
+              ;; use PyPi rather than biopython.org to ease updating
+              (uri (pypi-uri "biopython" version))
+              (sha256
+               (base32
+                "1q55jhf76z3k6is3psis0ckbki7df26x7dikpcc3vhk1vhkwribh"))))))
+
 (define-public python2-biopython
   (package-with-python2 python-biopython))
 
@@ -11730,7 +11742,7 @@ set.")
                (("from job_utils")
                 "from .job_utils")))))))
     (inputs
-     `(("python-biopython" ,python-biopython)
+     `(("python-biopython" ,python-biopython-1.73)
        ("python-boto3" ,python-boto3)
        ("python-h5py" ,python-h5py)
        ("python-lmfit" ,python-lmfit)



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